Brendan J. Kelly

发表

Power and sample-size estimation for microbiome studies using pairwise distances and PERMANOVA

Hongzhe Li, Robert Gross, Kyle Bittinger, 2015, Bioinform..

Enterococci enhance Clostridioides difficile pathogenesis

Matthew L. Jenior, Brendan J. Kelly, Eric P. Skaar, 2022, Nature.

Quantifying individual-level heterogeneity in infectiousness and susceptibility through household studies

Brendan J. Kelly, A. Hill, C. Merenstein, 2022, medRxiv.

Combined biomarkers discriminate a low likelihood of bacterial infection among surgical intensive care unit patients with suspected sepsis.

Jeffrey S Gerber, Susan E Coffin, Brendan J. Kelly, 2016, Diagnostic microbiology and infectious disease.

Pet Ownership Protects Against Recurrence of Clostridioides difficile Infection

Brendan J. Kelly, P. Tolomeo, E. Lautenbach, 2020, Open forum infectious diseases.

Dynamic Changes in the Nasal Microbiome Associated With Disease Activity in Patients With Granulomatosis With Polyangiitis

Brendan J. Kelly, P. Merkel, K. Bittinger, 2021, Arthritis & rheumatology.

Comparison of SARS-CoV-2 variants in primary human nasal cultures indicates Delta as most cytopathic and Omicron as fastest replicating

Brendan J. Kelly, Nikhila S Tanneti, F. Bushman, 2023, bioRxiv.

SARS-CoV-2 variants associated with vaccine breakthrough in the Delaware Valley through summer 2021

Brendan J. Kelly, F. Bushman, J. Mell, 2021, medRxiv.

Quantifying the Impact of Nasopharyngeal Specimen Quality on Severe Acute Respiratory Syndrome Coronavirus 2 Test Performance

Brendan J. Kelly, P. Tolomeo, E. Lautenbach, 2021, Open forum infectious diseases.

Composition and dynamics of the respiratory tract microbiome in intubated patients

Brendan J. Kelly, F. Bushman, K. Bittinger, 2016, Microbiome.

Gut microbiota features associated with Clostridioides difficile colonization in puppies

Brendan J. Kelly, R. Baldassano, Alexander S. F. Berry, 2019, PloS one.

Multiple Introductions of SARS-CoV-2 Alpha and Delta Variants into White-Tailed Deer in Pennsylvania

Brendan J. Kelly, F. Bushman, J. Everett, 2022, mBio.

Healthcare microenvironments define multidrug-resistant organism persistence

Brendan J. Kelly, P. Tolomeo, E. Lautenbach, 2021, Infection Control & Hospital Epidemiology.

SARS-CoV-2 Delta Variant (AY.3) in the Feces of a Domestic Cat

Brendan J. Kelly, F. Bushman, Ranawaka A.P.M Perera, 2022, Viruses.

Impact of Nasopharyngeal Specimen Quality on SARS-CoV-2 Test Sensitivity

Brendan J. Kelly, H. Abdallah, P. Tolomeo, 2020, medRxiv.

Quantitation of HIV DNA integration: effects of differential integration site distributions on Alu-PCR assays.

Brendan J. Kelly, Shoshannah L. Roth, F. Bushman, 2013, Journal of virological methods.

Impact of Levofloxacin for the Prophylaxis of Bloodstream Infection on the Gut Microbiome in Patients With Hematologic Malignancy

Brendan J. Kelly, D. Pegues, B. Kelly, 2018, Open forum infectious diseases.

Newer glycopeptide antibiotics for treatment of complicated skin and soft tissue infections: systematic review, network meta-analysis and cost analysis.

Brendan J. Kelly, C. Umscheid, R. Agarwal, 2017, Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases.

Clinical Practice and Infrastructure Review of Fecal Microbiota Transplantation for Clostridium difficile Infection

Brendan J. Kelly, P. Tebas, B. Kelly, 2018, Chest.

Molecular analysis of bacterial contamination on stethoscopes in an intensive care unit

Erik L. Clarke, Brendan J. Kelly, F. Bushman, 2018, Infection Control & Hospital Epidemiology.

Gut microbiome features associated with Clostridium difficile colonization in puppies

Brendan J. Kelly, R. Baldassano, Alexander S. F. Berry, 2019, bioRxiv.

Infrequent intrahousehold transmission of Clostridioides difficile between pet owners and their pets

Brendan J. Kelly, K. Bittinger, P. Pancholi, 2023, Zoonoses and public health.

Combined Biomarkers Predict Acute Mortality Among Critically Ill Patients With Suspected Sepsis*

Brendan J. Kelly, W. Bilker, J. Gerber, 2018, Critical care medicine.

SARS-CoV-2 Variants Associated with Vaccine Breakthrough in the Delaware Valley through Summer 2021

Brendan J. Kelly, F. Bushman, J. Mell, 2022, mBio.

Management of influenza symptoms in healthy children: cost-effectiveness of rapid testing and antiviral therapy.

Brendan J. Kelly, M. Rothberg, B. Kelly, 2005, Archives of pediatrics & adolescent medicine.

Respiratory microbiome disruption and risk for ventilator-associated lower respiratory tract infection.

Erik L. Clarke, Brendan J. Kelly, P. Tolomeo, 2021, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.