Judy H. Cho

Judy H. Cho, B. Taouli, N. Harpaz, 2021, Clinical gastroenterology and hepatology : the official clinical practice journal of the American Gastroenterological Association.

Luminally polarized mural and vascular remodeling in ileal strictures of Crohn's disease.

Judy H. Cho, B. Taouli, N. Harpaz, 2018, Human pathology.

Clinical and demographic characteristics predictive of treatment outcomes for certolizumab pegol in moderate to severe Crohn's disease: analyses from the 7‐year PRECiSE 3 study

Judy H. Cho, M. Regueiro, D. Schwartz, 2015, Alimentary pharmacology & therapeutics.

Appendectomy does not decrease the risk of future colectomy in UC: results from a large cohort and meta-analysis

Judy H. Cho, J. Rioux, M. Silverberg, 2016, Gut.

Genome-wide association identifies multiple ulcerative colitis susceptibility loci

Kathryn Roeder, Judy H Cho, Chun Li, 2010, Nature Genetics.

Extended haplotype association study in Crohn’s disease identifies a novel, Ashkenazi Jewish-specific missense mutation in the NF-κB pathway gene, HEATR3

Judy H. Cho, John P. Ferguson, P. Gregersen, 2013, Genes and Immunity.

NOX1 is essential for TNFα-induced intestinal epithelial ROS secretion and inhibits M cell signatures

Judy H. Cho, C. Argmann, H. Uhlig, 2022, Gut.

Association of the V122I Hereditary Transthyretin Amyloidosis Genetic Variant With Heart Failure Among Individuals of African or Hispanic/Latino Ancestry.

Judy H. Cho, G. Sirugo, D. Rader, 2019, JAMA.

Effector CD4+ T Cell Expression Signatures and Immune-Mediated Disease Associated Genes

Judy H. Cho, John P. Ferguson, Hongyu Zhao, 2012, PloS one.

Crohn's disease-associated NOD2 variants share a signaling defect in response to lipopolysaccharide and peptidoglycan.

Judy H. Cho, D. Nicolae, S. Foster, 2003, Gastroenterology.

Aldosterone stimulates intestinal Na+ absorption in rats by increasing NHE3 expression of the proximal colon.

Judy H. Cho, E. Chang, M. Musch, 1998, American journal of physiology. Cell physiology.

Sa1248 Late Adult-Onset Inflammatory Bowel Disease Patients Require Surgery Earlier During Their Disease Course Compared to Early Adult-Onset Patients

Judy H. Cho, J. Rioux, M. Silverberg, 2012 .

Interleukin-23/Th17 pathways and inflammatory bowel disease.

Judy H. Cho, C. Abraham, Judy H. Cho, 2009, Inflammatory bowel diseases.

Toward a fine-scale population health monitoring system

Danny S. Park, Judy H. Cho, Benjamin S. Glicksberg, 2021, Cell.

The genetics of inflammatory bowel disease.

Judy H. Cho, C. Weaver, Judy H. Cho, 2003, Gastroenterology.

Genome‐wide association study of N370S homozygous Gaucher disease reveals the candidacy of CLN8 gene as a genetic modifier contributing to extreme phenotypic variation

Judy H. Cho, P. Gregersen, Hongyu Zhao, 2012, American journal of hematology.

Heterogeneity of autoimmune diseases: pathophysiologic insights from genetics and implications for new therapies

Judy H. Cho, M. Feldman, Judy H. Cho, 2015, Nature Medicine.

From single-target to cellular niche targeting in Crohn's disease: intercepting bad communications

Judy H. Cho, S. Nayar, Shikha Nayar, 2021, EBioMedicine.

Functional annotation of a novel NFKB1 promoter polymorphism that increases risk for ulcerative colitis.

Judy H. Cho, P. Gregersen, M. Silverberg, 2004, Human molecular genetics.

A brief history of human disease genetics

Judy H. Cho, M. McCarthy, D. MacArthur, 2020, Nature.

Contribution of higher risk genes and European admixture to Crohn's disease in African Americans

Judy H. Cho, J. Rioux, M. Silverberg, 2012, Inflammatory bowel diseases.

Inflammatory Bowel Disease Genetics around the World

Judy H. Cho, Judy H. Cho, 2011 .

Stratification of Risk of Progression to Colectomy in Ulcerative Colitis using Measured and Predicted Gene Expression

Judy H. Cho, A. Kasarskis, A. Griffiths, 2021, bioRxiv.

Functional variants in the LRRK2 gene confer shared effects on risk for Crohn’s disease and Parkinson’s disease

Judy H. Cho, H. Ostrer, M. Daly, 2018, Science Translational Medicine.

Insights into the genetic epidemiology of Crohn's and rare diseases in the Ashkenazi Jewish population

Judy H. Cho, Jonathan M. Bloom, M. Pirinen, 2016, bioRxiv.

A protein-truncating R179X variant in RNF186 confers protection against ulcerative colitis

Beryl B. Cummings, Judy H. Cho, M. Rivas, 2015, Nature Communications.

High density mapping of the MHC identifies a shared role for HLA-DRB1*01:03 in inflammatory bowel diseases and heterozygous advantage in ulcerative colitis

Hailiang Huang, Stephan Ripke, Andre Franke, 2014, Nature Genetics.

Deep Resequencing of GWAS Loci Identifies Rare Variants in CARD9, IL23R and RNF186 That Are Associated with Ulcerative Colitis

Judy H. Cho, M. Rivas, M. Daly, 2013, PLoS genetics.

Deletion polymorphism upstream of IRGM associated with altered IRGM expression and Crohn's disease

Judy H Cho, Shannon D Chilewski, Michael C Zody, 2008, Nature Genetics.

Molecular characterization of limited ulcerative colitis reveals novel biology and predictors of disease extension.

Judy H. Cho, K. Hao, A. Kasarskis, 2021, Gastroenterology.

Sequencing of over 100,000 individuals identifies multiple genes and rare variants associated with Crohns disease susceptibility

Noor B. Dawany, Judy H. Cho, H. Ostrer, 2021, medRxiv.

Intestinal Inflammation Modulates the Expression of ACE2 and TMPRSS2 and Potentially Overlaps With the Pathogenesis of SARS-CoV-2–related Disease

Judy H. Cho, K. Hao, A. Kasarskis, 2020, Gastroenterology.

Intestinal Inflammation Modulates the Expression of ACE2 and TMPRSS2 and Potentially Overlaps With the Pathogenesis of SARS-CoV-2–related Disease

Judy H. Cho, K. Hao, A. Kasarskis, 2020, bioRxiv.

Inflammatory bowel disease genetics: Nod2.

Judy H. Cho, C. Abraham, Judy H. Cho, 2007, Annual review of medicine.

A Systematic Review of Monogenic Inflammatory Bowel Disease.

Judy H. Cho, A. Griffiths, C. Klein, 2021, Clinical gastroenterology and hepatology : the official clinical practice journal of the American Gastroenterological Association.

NADPH oxidase complex and IBD candidate gene studies: identification of a rare variant in NCF2 that results in reduced binding to RAC2

Judy H. Cho, C. Lees, J. Satsangi, 2011, Gut.

Genomics and the multifactorial nature of human autoimmune disease.

Judy H. Cho, P. Gregersen, Judy H. Cho, 2011, The New England journal of medicine.

Identification of association between disease and multiple markers via sparse partial least‐squares regression

Judy H. Cho, Hongyu Zhao, Hyonho Chun, 2011, Genetic epidemiology.

Transcript expression-aware annotation improves rare variant interpretation

Jonathan M. Mudge, Ryan L. Collins, Beryl B. Cummings, 2020, Nature.

Clinical Aspects and Pathophysiology of Inflammatory Bowel Disease

Judy H. Cho, R. Gokhale, B. Hendrickson, 2002, Clinical Microbiology Reviews.

Single nucleotide polymorphisms that increase expression of the guanosine triphosphatase RAC1 are associated with ulcerative colitis.

Judy H. Cho, A. Paterson, C. Lees, 2011, Gastroenterology.

Materials for : Host-microbe interactions shape genetic risk for inflammatory bowel disease

Judy H. Cho, C. Gieger, M. Daly, 2012 .

Integrative analysis of the Inflammatory Bowel Disease serum metabolome improves our understanding of genetic etiology and points to novel putative therapeutic targets.

Judy H. Cho, K. Hao, A. Kasarskis, 2021, Gastroenterology.

Different tissue phagocytes sample apoptotic cells to direct distinct homeostasis programs

Boris M. Hartmann, Judy H. Cho, B. Hartmann, 2016, Nature.

Prediction of complicated disease course for children newly diagnosed with Crohn's disease: a multicentre inception cohort study

Judy H. Cho, C. Huttenhower, R. Xavier, 2017, The Lancet.

Comparative performances of machine learning methods for classifying Crohn Disease patients using genome-wide genotyping data

Judy H. Cho, John P. Ferguson, G. Wainrib, 2019, Scientific Reports.

Immunoglobulin A Coating Identifies Colitogenic Bacteria in Inflammatory Bowel Disease

Judy H. Cho, T. Cullen, R. Flavell, 2014, Cell.

Inflamed ulcerative colitis regions associated to MRGPRX2-mediated mast cell degranulation and cell activation modules, defining a new therapeutic target.

Judy H. Cho, J. Rioux, M. Silverberg, 2021, Gastroenterology.

Confirmation of a Susceptibility Locus for Crohn's Disease on Chromosome 16

Judy H. Cho, B. Kirschner, S. Hanauer, 1997, Inflammatory bowel diseases.

Population-Based Penetrance of Deleterious Clinical Variants.

Judy H. Cho, G. Rocheleau, R. Do, 2022, JAMA.

Gastrointestinal and Hepatic Manifestations of Specific Genetic Disorders

Judy H. Cho, Judy H. Cho, 2015 .

Whole-exome Sequence Analysis Implicates Rare Il17REL Variants in Familial and Sporadic Inflammatory Bowel Disease

Judy H. Cho, A. Skol, M. Silverberg, 2016, Inflammatory bowel diseases.

Improved risk prediction for Crohn's disease with a multi-locus approach.

Judy H Cho, Hongyu Zhao, Michel Georges, 2011, Human molecular genetics.

Chronic stimulation of Nod2 mediates tolerance to bacterial products

Judy H. Cho, C. Abraham, M. Hedl, 2007, Proceedings of the National Academy of Sciences.

Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis

Judy H. Cho, Nadezhda T. Doncheva, O. Andreassen, 2013, Nature Genetics.

Meta-analysis fine-mapping is often miscalibrated at single-variant resolution

Judy H. Cho, Lifelines, Christopher R. Gignoux, 2022, medRxiv.

Phenotypic and Genotypic Characteristics of Inflammatory Bowel Disease in French Canadians: Comparison With a Large North American Repository

Judy H. Cho, J. Rioux, M. Silverberg, 2009, The American Journal of Gastroenterology.

Blood-Derived DNA Methylation Signatures of Crohn's Disease and Severity of Intestinal Inflammation.

Judy H. Cho, David T. Okou, D. Cutler, 2019, Gastroenterology.

Pattern recognition receptor signaling in human dendritic cells is enhanced by ICOS ligand and modulated by the Crohn's disease ICOSLG risk allele.

Judy H. Cho, C. Abraham, Kaida Ning, 2014, Immunity.

Unraveling the Genetics of Autoimmunity

Judy H. Cho, C. Abraham, R. Flavell, 2010, Cell.

Serum Analyte Profiles Associated With Crohn's Disease and Disease Location.

Judy H. Cho, Claire L. Simpson, J. Rioux, 2021, Inflammatory bowel diseases.

A structural variation reference for medical and population genetics

Tariq Ahmad, Patrick F. Sullivan, Mark I. McCarthy, 2020, Nature.

Serum Lipidomic Screen Identifies Key Metabolites, Pathways, and Disease Classifiers in Crohn's Disease.

Judy H. Cho, J. Rioux, M. Silverberg, 2023, Inflammatory bowel diseases.

Genetic Tools in Gastrointestinal Diseases

Judy H. Cho, C. Abraham, Judy H. Cho, 2012 .

Immunoglobulin A Targets a Unique Subset of the Microbiota in Inflammatory Bowel Disease.

Samir A. Shah, Judy H. Cho, J. Clemente, 2020, Cell host & microbe.

Deep Analysis of the Peripheral Immune System in IBD Reveals New Insight in Disease Subtyping and Response to Monotherapy or Combination Therapy

Judy H. Cho, E. Amir, A. Kasarskis, 2021, Cellular and molecular gastroenterology and hepatology.

COLLAGENOUS COLITIS IS ASSOCIATED WITH HLA SIGNATURE AND SHARES GENETIC RISKS WITH OTHER IMMUNE-MEDIATED DISEASES.

Judy H. Cho, E. Stahl, T. Raj, 2020, Gastroenterology.

Whole-genome sequencing of African Americans implicates differential genetic architecture in inflammatory bowel disease

Judy H. Cho, David T. Okou, Claire L. Simpson, 2021, American journal of human genetics.

A structural variation reference for medical and population genetics

Ryan L. Collins, Jack M. Fu, Beryl B. Cummings, 2020, Nature.

Genetic pleiotropy of ERCC6 loss‐of‐function and deleterious missense variants links retinal dystrophy, arrhythmia, and immunodeficiency in diverse ancestries

Judy H. Cho, L. Pasquale, G. Rocheleau, 2021, Human mutation.

Phenotype-Stratified Genetic Linkage Study Demonstrates that IBD2 Is an Extensive Ulcerative Colitis Locus

Judy H. Cho, J. Rioux, M. Silverberg, 2006, The American Journal of Gastroenterology.

Transcriptional Risk Scores link GWAS to eQTL and Predict Complications in Crohn's Disease

Judy H. Cho, A. Griffiths, G. Gibson, 2017, Nature Genetics.

We acknowledge patients and their families, and thank family recruitment doctors:

Judy H. Cho, I. Sobhani, D. Nicolae, 2001 .

Microbial Engraftment and Efficacy of Fecal Microbiota Transplant for Clostridium Difficile in Patients With and Without Inflammatory Bowel Disease.

Judy H. Cho, J. Clemente, J. Faith, 2019, Inflammatory bowel diseases.

Microbial Engraftment and Efficacy of Fecal Microbiota Transplant for Clostridium difficile Patients With and Without IBD

Judy H. Cho, J. Clemente, J. Faith, 2018, bioRxiv.

Single-cell transcriptomic profiling of healthy and fibrotic adult zebrafish liver reveals conserved cell identities and stellate cell activation phenotypes with human liver

Judy H. Cho, Jaime Chu, Chi Zhang, 2021, bioRxiv.

Common and rare variant prediction and penetrance of IBD in a large, multi-ethnic, health system-based biobank cohort.

Judy H. Cho, M. Daly, J. Rioux, 2020, Gastroenterology.

Genome-Wide Polygenic Risk Score for Retinopathy of Type 2 Diabetes.

Judy H. Cho, L. Pasquale, G. Rocheleau, 2021, Human molecular genetics.

Implementing genomic screening in diverse populations

Judy H. Cho, R. Loos, E. Kenny, 2021, medRxiv.

A Frameshift in CSF2RB Predominant Among Ashkenazi Jews Increases Risk for Crohn's Disease and Reduces Monocyte Signaling via GM-CSF.

Judy H. Cho, M. Rivas, M. Daly, 2016, Gastroenterology.

Predictors of Hospital Readmissions for Ulcerative Colitis in the United States: A National Database Study.

Judy H. Cho, B. Sands, G. Nadkarni, 2017, Inflammatory bowel diseases.

MDR1 Ala893 polymorphism is associated with inflammatory bowel disease.

Judy H. Cho, D. Nicolae, C. Panhuysen, 2003, American journal of human genetics.

L-histidine decarboxylase and Tourette's syndrome.

Judy H. Cho, Stephan J Sanders, B. O’Roak, 2010, The New England journal of medicine.

IL-23 and autoimmunity: new insights into the pathogenesis of inflammatory bowel disease.

Judy H. Cho, C. Abraham, Judy H. Cho, 2009, Annual review of medicine.

Inflammatory bowel disease: genetic and epidemiologic considerations.

Judy H. Cho, Judy H. Cho, 2008, World journal of gastroenterology.

Refined genomic localization and ethnic differences observed for the IBD5 association with Crohn's disease

Judy H. Cho, M. Daly, J. Rioux, 2007, European Journal of Human Genetics.

Recent Progres s in Inflammator y Bowel Disease Genetic s

Judy H. Cho, Judy H. Cho, 2006 .

Recent progress in inflammatory bowel disease genetics.

Judy H. Cho, Judy H. Cho, 2006, Advances in experimental medicine and biology.

Advances in the genetics of inflammatory bowel disease

Judy H. Cho, Judy H. Cho, 2004, Current gastroenterology reports.

Update on the genetics of inflammatory bowel disease

Judy H. Cho, Judy H. Cho, 2001, Current gastroenterology reports.

The Nod2 Gene in Crohn's Disease: Implications for Future Research Into the Genetics and Immunology of Crohn's Disease

Judy H. Cho, Judy H. Cho, 2001, Inflammatory bowel diseases.

Update on inflammatory bowel disease genetics

Judy H. Cho, Judy H. Cho, 2000, Current gastroenterology reports.

Genetic aspects of inflammatory bowel disease: How far have we come, and where are we heading?

Judy H. Cho, Judy H. Cho, 1999, Current gastroenterology reports.

The IBD International Genetics Consortium Provides Further Evidence for Linkage to IBD4 and Shows Gene‐Environment Interaction

Judy H. Cho, M. Silverberg, R. Duerr, 2005, Inflammatory bowel diseases.

Regulation of IL-8 and IL-1beta expression in Crohn's disease associated NOD2/CARD15 mutations.

Judy H. Cho, D. Nicolae, C. Abraham, 2004, Human molecular genetics.

Defining Complex Contributions of NOD2/CARD15 Gene Mutations, Age at Onset, and Tobacco Use On Crohn's Disease Phenotypes

Judy H. Cho, T. Beaty, R. Duerr, 2003, Inflammatory bowel diseases.

Characterising the loss-of-function impact of 5’ untranslated region variants in 15,708 individuals

Ryan L. Collins, Beryl B. Cummings, Kristen M. Laricchia, 2020, Nature Communications.

Landscape of multi-nucleotide variants in 125,748 human exomes and 15,708 genomes

Ryan L. Collins, Beryl B. Cummings, Kristen M. Laricchia, 2020, Nature Communications.

Transcript expression-aware annotation improves rare variant interpretation

Jonathan M. Mudge, Ryan L. Collins, Beryl B. Cummings, 2020, Nature.

Recent advances in genome sequencing technologies are improving our understanding of the etiology of human

Glaser, Judy H. Cho, D. McGovern, 2017 .

Autophagy Genome-wide association studies ( gwas ) in IBD

Judy H. Cho, D. McGovern, S. Kugathasan, 2022 .

Exome-wide evaluation of rare coding variants using electronic health records identifies new gene–phenotype associations

Alexander Hanbo Li, Judy H. Cho, K. Kaestner, 2021, Nature Medicine.

Celiac disease in a child with ulcerative colitis: a possible genetic association.

Judy H. Cho, U. Phatak, D. Pashankar, 2013, Journal of clinical gastroenterology.

Genome-Wide Association Study Identifies African-Specific Susceptibility Loci in African Americans With Inflammatory Bowel Disease.

Judy H. Cho, David T. Okou, Claire L. Simpson, 2017, Gastroenterology.

Characterization of genetic loci that affect susceptibility to inflammatory bowel diseases in African Americans.

Shannon E. Ellis, Judy H. Cho, J. Rioux, 2015, Gastroenterology.

Erratum: Genome-wide association identifies multiple ulcerative colitis susceptibility loci

Judy H. Cho, K. Roeder, M. Daly, 2011, Nature Genetics.

High-Throughput Characterization of Blood Serum Proteomics of IBD Patients with Respect to Aging and Genetic Factors

Joel Dudley, Eric E Schadt, Andrew Kasarskis, 2017, PLoS genetics.

Improved integrative framework combining association data with gene expression features to prioritize Crohn's disease genes.

Wei Zhang, Judy H Cho, Eric E Schadt, 2015, Human molecular genetics.

Analysis of keratin polypeptides 8 and 19 variants in inflammatory bowel disease.

Judy H. Cho, R. Duerr, S. Brant, 2007, Clinical gastroenterology and hepatology : the official clinical practice journal of the American Gastroenterological Association.

Limitations of Contemporary Guidelines for Managing Patients at High Genetic Risk of Coronary Artery Disease.

Judy H. Cho, A. Philippakis, A. Khera, 2020, Journal of the American College of Cardiology.

Relationship Between Proximal Crohn's Disease Location and Disease Behavior and Surgery: A Cross-Sectional Study of the IBD Genetics Consortium

Judy H. Cho, J. Rioux, M. Silverberg, 2013, The American Journal of Gastroenterology.

Functional consequences of NOD2 (CARD15) mutations

Judy H. Cho, C. Abraham, Judy H. Cho, 2006, Inflammatory bowel diseases.

Dominant-negative TLR5 polymorphism reduces adaptive immune response to flagellin and negatively associates with Crohn's disease.

Judy H Cho, Dan L Nicolae, Judy H. Cho, 2006, American journal of physiology. Gastrointestinal and liver physiology.

High-Throughput Identification of the Plasma Proteomic Signature of Inflammatory Bowel Disease

Judy H. Cho, K. Hao, A. Kasarskis, 2018, Journal of Crohn's & colitis.

The genetics of inflammatory bowel disease.

Judy H. Cho, D. Bonen, 2003, Gastroenterology.

Erratum: Ulcerative colitis-risk loci on chromosomes 1p36 and 12q15 found by genome-wide association study(Nature Genetics (2009) 41 (216220))

Judy H. Cho, K. Roeder, M. Daly, 2009 .

The Promise of Epigenetics. Has It Delivered New Insights?

Judy H. Cho, Judy H. Cho, 2016, Digestive Diseases.

Genetic Risk Factors in IBD : Do They Play the Same Role in East and West ?

Judy H. Cho, Judy H. Cho, 2016 .

Earlier Anti-Tumor Necrosis Factor Therapy of Crohn’s Disease Correlates with Slower Progression of Bowel Damage

Judy H. Cho, M. Dubinsky, B. Taouli, 2019, Digestive Diseases and Sciences.

Assessment of DNA methylation at the interferon regulatory factor 5 (IRF5) promoter region in inflammatory bowel diseases

Judy H. Cho, B. Melegh, G. Gathungu, 2010, International Journal of Colorectal Disease.

Machine Learning to Predict Mortality and Critical Events in COVID-19 Positive New York City Patients

Riccardo Miotto, Kipp W. Johnson, Fayzan F. Chaudhry, 2020, medRxiv.

Association mapping of inflammatory bowel disease loci to single variant resolution

Masa Umicevic Mirkov, Judy H. Cho, M. Daly, 2015, bioRxiv.

Inflammatory bowel disease: an update on the fundamental biology and clinical management.

Judy H. Cho, R. Blumberg, James Lewis, 2011, Gastroenterology.

A Pleiotropic Missense Variant in SLC39A8 Is Associated With Crohn's Disease and Human Gut Microbiome Composition.

Judy H. Cho, M. Daly, L. Klei, 2016, Gastroenterology.

A pleiotropic missense variant in SLC 39 A 8 is associated with Crohn ’ s disease and human gut microbiome composition Short Title : SLC 39 A 8 associated with CD and gut microbiome

Judy H. Cho, M. Daly, L. Klei, 2016 .

Prescriber Adoption of SLCO1B1 Genotype‐Guided Simvastatin Clinical Decision Support in a Clinical Pharmacogenetics Program

Judy H. Cho, O. Gottesman, E. Bottinger, 2022, Clinical pharmacology and therapeutics.

Luminal narrowing alone allows an accurate diagnosis of Crohn's disease small bowel strictures at cross-sectional imaging.

Judy H. Cho, B. Taouli, N. Harpaz, 2020, Journal of Crohn's & colitis.

Challenges in IBD Research: Precision Medicine.

Judy H Cho, Mark Curran, Judy H. Cho, 2019, Inflammatory bowel diseases.

Ocular Manifestations in Inflammatory Bowel Disease Are Associated with Other Extra-intestinal Manifestations, Gender, and Genes Implicated in Other Immune-related Traits.

Judy H. Cho, J. Rioux, M. Silverberg, 2016, Journal of Crohn's & colitis.

Emergent colectomy rates decreased while elective ileal pouch rates were stable over time: a nationwide inpatient sample study

Louis J. Cohen, Judy H. Cho, M. Dubinsky, 2019, International Journal of Colorectal Disease.

REVIEWS IN BASIC AND CLINICAL GASTROENTEROLOGY The Genetics of Inflammatory Bowel Disease

Judy H. Cho, C. Weaver, Judy H. Cho, 2007 .

Polygenic Risk Score for Alcohol Drinking Behavior Improves Prediction of Inflammatory Bowel Disease Risk.

Judy H. Cho, K. Hao, A. Kasarskis, 2021, Human molecular genetics.

Granulocyte–Macrophage Colony-Stimulating Factor Autoantibodies: A Marker of Aggressive Crohn's Disease

Judy H. Cho, John P. Ferguson, M. Silverberg, 2013, Inflammatory bowel diseases.

760 Divergence in L4 Crohn's Disease: Jejunal, Not Esophagogastroduodenal Involvement, is Protective of L2 Disease Location, and a Risk for Stricturing Behavior and Multiple Abdominal Surgeries. Report From the NIDDK-IBDGC Registry

Judy H. Cho, J. Rioux, M. Silverberg, 2010 .

GENETICS AND GENETIC MARKERS IN INFLAMMATORY BOWEL DISEASE

Judy H. Cho, S. Brant, 1998 .

A Genome Scan in 260 Inflammatory Bowel Disease-Affected Relative Pairs

Judy H. Cho, D. Nicolae, C. Panhuysen, 2004, Inflammatory bowel diseases.

A lncRNA from an inflammatory bowel disease risk locus maintains intestinal host-commensal homeostasis

Judy H. Cho, R. Flavell, Hailiang Huang, 2023, Cell Research.

Neutralizing Anti-Granulocyte Macrophage-Colony Stimulating Factor Autoantibodies Recognize Post-Translational Glycosylations on Granulocyte Macrophage-Colony Stimulating Factor Years Before Diagnosis and Predict Complicated Crohn’s Disease

Judy H. Cho, E. Kenigsberg, M. Merad, 2022, Gastroenterology.

Single‐cell transcriptomics reveals conserved cell identities and fibrogenic phenotypes in zebrafish and human liver

Judy H. Cho, Jaime Chu, M. Giri, 2022, Hepatology communications.

Machine Learning to Predict Mortality and Critical Events in a Cohort of Patients With COVID-19 in New York City: Model Development and Validation

Joseph Finkelstein, Riccardo Miotto, Kipp W. Johnson, 2020, Journal of medical Internet research.

The heritable immune system

Judy H. Cho, 2015, Nature Biotechnology.

Augmented Intelligence with Natural Language Processing Applied to Electronic Health Records is Useful for Identifying Patients with Non-Alcoholic Fatty Liver Disease at Risk for Disease Progression

Joseph L. Kannry, Girish N. Nadkarni, Catherine K. Craven, 2019, bioRxiv.

Genetic coding variant in complement factor B (CFB) is associated with increased risk for perianal Crohn’s disease and leads to impaired CFB cleavage and phagocytosis

Judy H. Cho, Alka A. Potdar, J. Rioux, 2023, Gut.

An integrated taxonomy for monogenic inflammatory bowel disease.

Judy H. Cho, A. Regev, R. Xavier, 2021, Gastroenterology.

Evaluating drug targets through human loss-of-function genetic variation

Ryan L. Collins, Beryl B. Cummings, Kristen M. Laricchia, 2020, Nature.

Shared risk genes between inflammatory bowel disease (IBD) and other immune-mediated disorders: First results from the immunochip project of the international ibd genetics consortium (IIBDGC): O-16.

Judy H. Cho, D. McGovern, R. Weersma, 2011 .

Risk Alleles for Drug Targets: Genomic Markers of Drug Response

Judy H. Cho, R. Ungaro, Judy H. Cho, 2019, Biomarkers in Inflammatory Bowel Diseases.

Significant role of genetics in IBD: the NOD2 gene.

Judy H. Cho, Judy H. Cho, 2003, Reviews in gastroenterological disorders.

Evidence for an inflammatory bowel disease locus on chromosome 3p26: linkage, transmission/disequilibrium and partitioning of linkage.

Judy H. Cho, D. Weeks, R. Baldassano, 2002, Human molecular genetics.

Judy H. Cho, E. Kenigsberg, M. Merad, 2022, Gastroenterology.

Update on genetics of inflammatory bowel disease.

Judy H. Cho, J. Hugot, Judy H. Cho, 2002, Current opinion in gastroenterology.

Age and CD161 Expression Contribute to Inter-Individual Variation in Interleukin-23 Response in CD8+ Memory Human T Cells

Judy H. Cho, C. Abraham, Wei Zhang, 2013, PloS one.

Genetic advances in inflammatory bowel disease

Judy H. Cho, Judy H. Cho, 2006, Current treatment options in gastroenterology.

Bridging the gap between host immune response and intestinal dysbiosis in inflammatory bowel disease: does immunoglobulin A mark the spot?

Judy H. Cho, N. LeLeiko, B. Sands, 2015, Clinical gastroenterology and hepatology : the official clinical practice journal of the American Gastroenterological Association.

A genome scan in 260 inflammatory bowel disease-affected relative pairs.

Judy H. Cho, D. Nicolae, C. Panhuysen, 2004, Inflammatory bowel diseases.

Machine Learning to Predict Mortality and Critical Events in a Cohort of Patients With COVID-19 in New York City: Model Development and Validation (Preprint)

Kipp W. Johnson, Judy H. Cho, A. Just, 2020 .

Single-Cell Analysis of Crohn’s Disease Lesions Identifies a Pathogenic Cellular Module Associated with Resistance to Anti-TNF Therapy

Judy H. Cho, E. Schadt, E. Kenigsberg, 2019, Cell.

Increased sensitivity to dextran sodium sulfate colitis in IRE1beta-deficient mice.

Judy H. Cho, A. West, Xiaozhong Wang, 2001, The Journal of clinical investigation.

High-density mapping of the MHC identifies a shared role for HLA-DRB1*01:03 in inflammatory bowel diseases and heterozygous advantage in ulcerative colitis

Judy H. Cho, C. Gieger, H. Hakonarson, 2015 .

Genetic Identification of a Common Collagen Disease in Puerto Ricans via Identity-by-Descent Mapping in a Health System

Judy H. Cho, L. Hindorff, D. Ruderfer, 2017, bioRxiv.

Expression of NOD2 in Paneth cells: a possible link to Crohn’s ileitis

Judy H. Cho, M. Tretiakova, E. Smith, 2003, Gut.

Identifying high-impact variants and genes in exomes of Ashkenazi Jewish inflammatory bowel disease patients

Judy H. Cho, H. Ostrer, M. Daly, 2023, Nature communications.