Vo Hong Thanh

发表

Stochastic simulation of biochemical reactions with partial-propensity and rejection-based approaches.

Vo Hong Thanh, 2017, Mathematical biosciences.

RSSALib: a library for stochastic simulation of complex biochemical reactions

Vo Hong Thanh, 2020, Bioinform..

HRSSA - Efficient hybrid stochastic simulation for spatially homogeneous biochemical reaction networks

Corrado Priami, Luca Marchetti, Vo Hong Thanh, 2016, J. Comput. Phys..

Efficient formulation of the rejection-based algorithm for biochemical reactions with delays

Corrado Priami, Roberto Zunino, Vo Hong Thanh, 2019 .

Efficient formulation of the rejection-based algorithm for biochemical reactions with delays

Corrado Priami, Roberto Zunino, Vo Hong Thanh, 2019, Int. J. Bioinform. Res. Appl..

Efficient rejection-based simulation of biochemical reactions with stochastic noise and delays.

Corrado Priami, Roberto Zunino, Vo Hong Thanh, 2014, The Journal of chemical physics.

Accelerating rejection-based simulation of biochemical reactions with bounded acceptance probability.

Corrado Priami, Roberto Zunino, Vo Hong Thanh, 2016, The Journal of chemical physics.

On the rejection-based algorithm for simulation and analysis of large-scale reaction networks.

Corrado Priami, Roberto Zunino, Vo Hong Thanh, 2015, The Journal of chemical physics.

Implementations of the Stochastic Simulation Algorithm

Corrado Priami, Luca Marchetti, Vo Hong Thanh, 2017 .

Simulation of Mixed Traffic Flow within Intersection

Vo Hong Thanh, Tran Van Hoai, T. Hoai, 2010, 2010 Second International Conference on Knowledge and Systems Engineering.

Efficient anticorrelated variance reduction for stochastic simulation of biochemical reactions.

Vo Hong Thanh, 2019, IET systems biology.

A Critical Comparison of Rejection-Based Algorithms for Simulation of Large Biochemical Reaction Networks

Vo Hong Thanh, 2018, Bulletin of Mathematical Biology.

Tree-based search for stochastic simulation algorithm

Roberto Zunino, Vo Hong Thanh, 2012, SAC '12.

Incorporating extrinsic noise into the stochastic simulation of biochemical reactions: A comparison of approaches.

Corrado Priami, Vo Hong Thanh, Luca Marchetti, 2018, The Journal of chemical physics.

Splitting for rare event simulation in biochemical systems

Roberto Zunino, Vo Hong Thanh, R. Zunino, 2013, SimuTools.

Approximate Simulation of Biochemical Reaction Systems

Corrado Priami, Luca Marchetti, Vo Hong Thanh, 2017 .

Simulation Algorithms for Computational Systems Biology

Corrado Priami, Luca Marchetti, Vo Hong Thanh, 2017, Texts in Theoretical Computer Science. An EATCS Series.

Hybrid Simulation Algorithms

Corrado Priami, Luca Marchetti, Vo Hong Thanh, 2017 .

On Efficient Algorithms for Stochastic Simulation of Biochemical Reaction Systems

Vo Hong Thanh, 2013 .

Adaptive tree-based search for stochastic simulation algorithm

Roberto Zunino, Vo Hong Thanh, R. Zunino, 2014, Int. J. Comput. Biol. Drug Des..

Simulation of biochemical reactions with time-dependent rates by the rejection-based algorithm.

Corrado Priami, Vo Hong Thanh, C. Priami, 2015, The Journal of chemical physics.

Efficient stochastic simulation of biochemical reactions with noise and delays.

Corrado Priami, Roberto Zunino, Vo Hong Thanh, 2017, The Journal of chemical physics.

A comparison of deterministic and stochastic approaches for sensitivity analysis in computational systems biology

Corrado Priami, Luca Marchetti, Vo Hong Thanh, 2019, Briefings Bioinform..

Efficient Constant-Time Complexity Algorithm for Stochastic Simulation of Large Reaction Networks

Corrado Priami, Roberto Zunino, Vo Hong Thanh, 2017, IEEE/ACM Transactions on Computational Biology and Bioinformatics.

Cotranscriptional Kinetic Folding of RNA Secondary Structures Including Pseudoknots

Pekka Orponen, Vo Hong Thanh, Dani Korpela, 2021, J. Comput. Biol..

Efficient finite-difference method for computing sensitivities of biochemical reactions

Corrado Priami, Roberto Zunino, Vo Hong Thanh, 2017, Proceedings of the Royal Society A: Mathematical, Physical and Engineering Sciences.

Cotranscriptional Kinetic Folding of RNA Secondary Structures Including Pseudoknots

Vo Hong Thanh, P. Orponen, Dani Korpela, 2020, J. Comput. Biol..

Cotranscriptional kinetic folding of RNA secondary structures

Vo Hong Thanh, P. Orponen, 2020, bioRxiv.

Beyond time-homogeneity for continuous-time multistate Markov models

Vo Hong Thanh, F. Bois, G. H. Hermansen, 2022, 2211.03214.

Efficient anticorrelated variance reduction for stochastic simulation of biochemical reactions.

Vo Hong Thanh, 2019, IET systems biology.

Simulation Algorithms for Computational Systems Biology

Gheorghe Paun, Grzegorz Rozenberg, Arto Salomaa, 2017, Texts in Theoretical Computer Science. An EATCS Series.

Efficient stochastic simulation of biochemical reactions with noise and delays.

Vo Hong Thanh, C. Priami, R. Zunino, 2017, The Journal of chemical physics.