Jasper Wouters

Cis-topic modelling of single-cell epigenomes

Stein Aerts, Carmen Bravo González-Blas, Liesbeth Minnoye, 2018, bioRxiv.

Towards online spike sorting for high-density neural probes using discriminative template matching with suppression of interfering spikes

Alexander Bertrand, Jasper Wouters, Fabian Kloosterman, 2018, Journal of neural engineering.

A data-driven regularization approach for template matching in spike sorting with high-density neural probes

Fabian Kloosterman, Jasper Wouters, Alexander Bertrand, 2019, 2019 41st Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC).

cisTopic: cis-regulatory topic modeling on single-cell ATAC-seq data

Stein Aerts, Liesbeth Minnoye, Dafni Papasokrati, 2019, Nature Methods.

Design and validation of low-complexity methods for resolving spike overlap in neuronal spike sorting

Jasper Wouters, 2020 .

Signal-to-peak-interference ratio maximization with automatic interference weighting for threshold-based spike sorting of high-density neural probe data

Fabian Kloosterman, Jasper Wouters, Alexander Bertrand, 2019, 2019 9th International IEEE/EMBS Conference on Neural Engineering (NER).

SCENIC: Single-cell regulatory network inference and clustering

Pierre Geurts, Carmen Bravo González-Blas, Sara Aibar, 2017 .

SHYBRID: A Graphical Tool for Generating Hybrid Ground-Truth Spiking Data for Evaluating Spike Sorting Performance

Alexander Bertrand, Fabian Kloosterman, Jasper Wouters, 2019, bioRxiv.

Data-Driven Multi-Channel Filter Design with Peak-Interference Suppression for Threshold-Based Spike Sorting in High-Density Neural Probes

Alexander Bertrand, Fabian Kloosterman, Jasper Wouters, 2018, 2018 IEEE International Conference on Acoustics, Speech and Signal Processing (ICASSP).

Melanoma addiction to the long non-coding RNA SAMMSON

Stefan Van Aelst, Stein Aerts, Jasper Wouters, 2016, Nature.

Decoding transcriptional states in cancer.

Stein Aerts, Jasper Wouters, S. Aerts, 2017, Current opinion in genetics & development.