Honggao Yan

发表

Combined QM(DFT)/MM molecular dynamics simulations of the deamination of cytosine by yeast cytosine deaminase (yCD)

Yuan Zhao, Xin Zhang, Zexing Cao, 2016, J. Comput. Chem..

A combined ONIOM quantum chemical-molecular dynamics study of zinc-uracil bond breaking in yeast cytosine deaminase.

Honggao Yan, Lishan Yao, Robert I Cukier, 2006, The journal of physical chemistry. B.

Catalytic mechanism of yeast cytosine deaminase: an ONIOM computational study.

Stepan Sklenak, Honggao Yan, Lishan Yao, 2004, Journal of the American Chemical Society.

Role of glutamate 64 in the activation of the prodrug 5-fluorocytosine by yeast cytosine deaminase.

Stepan Sklenak, Honggao Yan, Yue Li, 2012, Biochemistry.

Proton-Shuttle-Assisted Heterolytic Carbon–Carbon Bond Cleavage and Formation

Ruibo Wu, Zexing Cao, Yirong Mo, 2015 .

Dynamic roles of arginine residues 82 and 92 of Escherichia coli 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase: crystallographic studies.

Honggao Yan, Yue Li, Honggao Yan, 2003, Biochemistry.

Molecular dynamics simulations of the Escherichia coli HPPK apo-enzyme reveal a network of conformational transitions.

Minghui Yang, Honggao Yan, Honggao Yan, 2015, Biochemistry.

Conformational transition in signal transduction: metastable states and transition pathways in the activation of a signaling protein.

Rahul Banerjee, Honggao Yan, Robert I Cukier, 2015, The journal of physical chemistry. B.

Structure-Function Relationships of Cellular Retinoic Acid-binding Proteins

Honggao Yan, Yue Li, Honggao Yan, 1997, The Journal of Biological Chemistry.

Thermotoga neapolitana adenylate kinase is highly active at 30 degrees C.

Harini Krishnamurthy, Honggao Yan, C. Vieille, 2003, The Biochemical journal.

NTP-driven Translocation by Human RNA Polymerase II*

Hiroshi Handa, Yuki Yamaguchi, Honggao Yan, 2003, The Journal of Biological Chemistry.

A molecular dynamics exploration of the catalytic mechanism of yeast cytosine deaminase.

Stepan Sklenak, Honggao Yan, Lishan Yao, 2005, The journal of physical chemistry. B.

(www.interscience.wiley.com) DOI:10.1002/jmr.942 Scoring ligand similarity in structure-based virtual screening

Anjali Rohatgi, Honggao Yan, L. Kuhn, 2022 .

A molecular dynamics study of the ligand release path in yeast cytosine deaminase.

Honggao Yan, Lishan Yao, Robert I Cukier, 2007, Biophysical journal.