Pralay Mitra

发表

A network‐based zoning for parallel whole‐cell simulation

Barnali Das, Abhijeet Rajendra Patil, Pralay Mitra, 2018, Bioinform..

Using correlated parameters for improved ranking of protein–protein docking decoys

Debnath Pal, Pralay Mitra, D. Pal, 2011, J. Comput. Chem..

Parsers, Data Structures and Algorithms for Macromolecular Analysis Toolkit (MAT): Design and Implementation

Anupam Chattopadhyay, Pralay Mitra, Gazal Kalyan, 2019, bioRxiv.

An Evolution-Based Approach to De Novo Protein Design and Case Study on Mycobacterium tuberculosis

Yang Zhang, Pralay Mitra, David Marsh, 2013, PLoS Comput. Biol..

EvoDesign: de novo protein design based on structural and evolutionary profiles

Yang Zhang, Pralay Mitra, David Shultis, 2013, Nucleic Acids Res..

PRUNE and PROBE—two modular web services for protein–protein docking

Debnath Pal, Pralay Mitra, D. Pal, 2011, Nucleic Acids Res..

Cluster-Based Relative Outlier Under-Sampling Technique

Pabitra Mitra, Pralay Mitra, Atif Hassan, 2019, ICDM.

Identifying the nature of the interface in protein-protein complexes

Pralay Mitra, Pralay Mitra, 2010 .

dockYard–a repository to assist modeling of protein-protein docking

Debnath Pal, Pralay Mitra, 2011, Journal of molecular modeling.

EFFICIENTLY SCREENING MONOMERS OF PROTEINS USING NAÏVE BAYES CLASSIFIER

Pralay Mitra, Debnath Pal, 2007 .

New measures for estimating surface complementarity and packing at protein–protein interfaces

Debnath Pal, Pralay Mitra, D. Pal, 2010, FEBS letters.

Boosting phosphorylation site prediction with sequence feature‐based machine learning

Pralay Mitra, Shyantani Maiti, Atif Hassan, 2020, Proteins.

Analyzing Change in Protein Stability Associated with Single Point Deletions in a Newly Defined Protein Structure Database.

Pralay Mitra, Anupam Banerjee, Yaakov Levy, 2019, Journal of proteome research.

An Evolutionary Profile Guided Greedy Parallel Replica-Exchange Monte Carlo Search Algorithm for Rapid Convergence in Protein Design

Pralay Mitra, Anupam Banerjee, Kuntal Pal, 2019, IEEE/ACM Transactions on Computational Biology and Bioinformatics.

Estimating the Effect of Single-Point Mutations on Protein Thermodynamic Stability and Analyzing the Mutation Landscape of the p53 Protein

Pralay Mitra, Anupam Banerjee, Pralay Mitra, 2020, J. Chem. Inf. Model..

Interface of Apoptotic Protein Complexes Has Distinct Properties

Debnath Pal, Pralay Mitra, Riddhiman Dhar, 2009, Silico Biol..

A graph theoretic approach to minimize total wire length in channel routing

Nabin Ghoshal, Rajat Kumar Pal, Pralay Mitra, 2003, TENCON 2003. Conference on Convergent Technologies for Asia-Pacific Region.

Estimating Change in Foldability Due to Multipoint Deletions in Protein Structures

Pralay Mitra, Anupam Banerjee, Kushal Kanti Ghosh, 2020, J. Chem. Inf. Model..

High-Performance Whole-Cell Simulation Exploiting Modular Cell Biology Principles

Pralay Mitra, Barnali Das, Pralay Mitra, 2021, J. Chem. Inf. Model..

How Many Protein-Protein Interactions Types Exist in Nature?

Pralay Mitra, Yang Zhang, Yang Zhang, 2012, PloS one.

Combining Bayes classification and point group symmetry under Boolean framework for enhanced protein quaternary structure inference.

Pralay Mitra, Debnath Pal, D. Pal, 2011, Structure.

Changing the Apoptosis Pathway through Evolutionary Protein Design.

Pralay Mitra, Yang Zhang, Christoph H. Borchers, 2019, Journal of molecular biology.