Peter J. Ortoleva

发表

Efficient solution technique for solving the Poisson–Boltzmann equation

Kagan Tuncay, Abdallah Sayyed-Ahmad, Peter J. Ortoleva, 2004, J. Comput. Chem..

ProtoMD: A prototyping toolkit for multiscale molecular dynamics

Endre T. Somogyi, Andrew Abi Mansour, Peter J. Ortoleva, 2013, Comput. Phys. Commun..

A Review of Two Multiscale Methods for the Simulation of Macromolecular Assemblies: Multiscale Perturbation and Multiscale Factorization

Stephen Pankavich, Peter J. Ortoleva, P. Ortoleva, 2015, Comput..

Self-Organized Megastructures in Sedimentary Basins

Peter J. Ortoleva, 2004 .

Simulating cellular dynamics through a coupled transcription, translation, metabolic model

Peter J. Ortoleva, Elizabeth L. Weitzke, P. Ortoleva, 2003, Comput. Biol. Chem..

Quasiequivalence of multiscale coevolution and ensemble MD simulations: A demonstration with lactoferrin

Jing Yang, Abhishek Singharoy, Peter J. Ortoleva, 2014 .

Multiscale Macromolecular Simulation: Role of Evolving Ensembles

Abhishek Singharoy, Peter J. Ortoleva, Harshad Joshi, 2012, J. Chem. Inf. Model..

New space warping method for the simulation of large‐scale macromolecular conformational changes

Khuloud Jaqaman, Peter J. Ortoleva, 2002, J. Comput. Chem..

Transcriptional Regulatory Networks via Gene Ontology and Expression Data

Kagan Tuncay, Alaa Abi-Haidar, Jingjun Sun, 2007, Silico Biol..

Molecular dynamics/order parameter extrapolation for bionanosystem simulations

Yinglong Miao, Peter J. Ortoleva, P. Ortoleva, 2009, J. Comput. Chem..

Chromosome segregation in Escherichia coli division: A free energy-driven string model

Kagan Tuncay, Jianmiao Fan, Peter J. Ortoleva, 2007, Comput. Biol. Chem..