Robert A. Quinn

Feature-based molecular networking in the GNPS analysis environment

Simon Rogers, Justin J. J. van der Hooft, Ngoc Hung Nguyen, 2020, Nature Methods.

ReDU: a framework to find and reanalyze public mass spectrometry data

Justin J. J. van der Hooft, Ngoc Hung Nguyen, Nuno Bandeira, 2020, Nature Methods.

Feature-Based Molecular Networking in the GNPS Analysis Environment

Simon Rogers, Nuno Bandeira, Mingxun Wang, 2019, Nature Methods.

From Sample to Multi-Omics Conclusions in under 48 Hours

Rob Knight, Pieter C. Dorrestein, Jose A Navas-Molina, 2016, mSystems.

Niche partitioning of a pathogenic microbiome driven by chemical gradients

Rob Knight, Pieter C. Dorrestein, Louis-Felix Nothias, 2018, Science Advances.

Meta-mass shift chemical profiling of metabolomes from coral reefs

Pieter C. Dorrestein, Theodore Alexandrov, Daniel Petras, 2017, Proceedings of the National Academy of Sciences.

Optimizing sequencing protocols for leaderboard metagenomics by combining long and short reads

Douglas J. Conrad, Pavel A. Pevzner, Rob Knight, 2019, Genome Biology.

Chemical Impacts of the Microbiome Across Scales Reveal Novel Conjugated Bile Acids

Rob Knight, Mingxun Wang, Pieter C. Dorrestein, 2019, bioRxiv.

Global chemical effects of the microbiome include new bile-acid conjugations

Julie C. Lumeng, Rob Knight, Mingxun Wang, 2020, Nature.

Biogeochemical Forces Shape the Composition and Physiology of Polymicrobial Communities in the Cystic Fibrosis Lung

Forest Rohwer, Yan Wei Lim, Robert A. Quinn, 2014, mBio.