Oliver Ebenhöh

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Building Mathematical Models of Biological Systems with modelbase

Oliver Ebenhöh, Marvin van Aalst, Nima Philipp Saadat, 2018 .

Biosynthetic Potentials of Metabolites and Their Hierarchical Organization

Oliver Ebenhöh, Franziska Matthäus, Carlos Salazar, 2008, PLoS Comput. Biol..

Integration of proteomic and metabolomic profiling as well as metabolic modeling for the functional analysis of metabolic networks.

Dirk Walther, Oliver Ebenhöh, Wolfram Weckwerth, 2011, Methods in molecular biology.

moped - A Python package for metabolic modelling and topological analysis

Oliver Ebenhöh, Nima P. Saadat, Marvin van Aalst, 2020, bioRxiv.

A minimal mathematical model of nonphotochemical quenching of chlorophyll fluorescence

Oliver Ebenhöh, Torsten Houwaart, Heiko Lokstein, 2011, Biosyst..

Hardness and Approximability of the Inverse Scope Problem

Joachim Selbig, Oliver Ebenhöh, Zoran Nikoloski, 2008, WABI.

MetaPath Online: a web server implementation of the network expansion algorithm

Oliver Ebenhöh, Thomas Handorf, O. Ebenhöh, 2007, Nucleic Acids Res..

Mass-balanced randomization of metabolic networks

Joachim Selbig, Oliver Ebenhöh, Zoran Nikoloski, 2011, Bioinform..

The importance of the photosynthetic Gibbs effect in the elucidation of the Calvin–Benson–Bassham cycle

Oliver Ebenhöh, Stephanie Spelberg, O. Ebenhöh, 2018, Biochemical Society transactions.

Constructing and analysing dynamic models with modelbase v1.2.3: a software update

Oliver Ebenhöh, Anna Matuszyńska, Marvin van Aalst, 2020, BMC Bioinformatics.

Mathematical model of a serine integrase-controlled toggle switch with a single input

Oliver Ebenhöh, Alexandra Pokhilko, W Marshall Stark, 2018, Journal of The Royal Society Interface.

Emergent Subpopulation Behavior Uncovered with a Community Dynamic Metabolic Model of Escherichia coli Diauxic Growth

Oliver Ebenhöh, Daniel Segrè, Antonella Succurro, 2018, mSystems.

Introduction to focus issue: dynamics in systems biology.

Jürgen Kurths, Celso Grebogi, Oliver Ebenhöh, 2010, Chaos.

Functional Classification of Genome-Scale Metabolic Networks

Oliver Ebenhöh, Thomas Handorf, O. Ebenhöh, 2009, EURASIP J. Bioinform. Syst. Biol..

Review and perspective on mathematical modeling of microbial ecosystems

Oliver Ebenhöh, Antonella Succurro, A. Succurro, 2018, Biochemical Society transactions.

Constructing and analysing dynamic models with modelbase v1.2.3: a software update

Oliver Ebenhöh, Marvin van Aalst, Anna Matuszynska, 2021, BMC Bioinform..

Measuring correlations in metabolomic networks with mutual information.

Oliver Ebenhöh, Ernst-Walter Knapp, Jorge Numata, 2008, Genome informatics. International Conference on Genome Informatics.

Carbohydrate-active enzymes exemplify entropic principles in metabolism

Alexander Skupin, Oliver Ebenhöh, O. Ebenhöh, 2011, Molecular systems biology.

Structural analysis of expressed metabolic subnetworks.

Oliver Ebenhöh, Wolfram Liebermeister, 2006, Genome informatics. International Conference on Genome Informatics.

A Bacterial Glucanotransferase Can Replace the Complex Maltose Metabolism Required for Starch to Sucrose Conversion in Leaves at Night*

Oliver Ebenhöh, Birte Svensson, Martin Rejzek, 2013, The Journal of Biological Chemistry.

Adjustment of carbon fluxes to light conditions regulates the daily turnover of starch in plants: a computational model.

Mark Stitt, Oliver Ebenhöh, Alexandra Pokhilko, 2014, Molecular bioSystems.

A cross species comparison of metabolic network functions.

Oliver Ebenhöh, Thomas Handorf, Reinhart Heinrich, 2005, Genome informatics. International Conference on Genome Informatics.

Evolutionary significance of metabolic network properties

Joachim Selbig, Oliver Ebenhöh, Zoran Nikoloski, 2011, Journal of The Royal Society Interface.

Comparing flux balance analysis to network expansion: producibility, sustainability and the scope of compounds.

Oliver Ebenhöh, O. Ebenhöh, K. Kruse, 2008, Genome informatics. International Conference on Genome Informatics.

Metabolic synergy: increasing biosynthetic capabilities by network cooperation.

Oliver Ebenhöh, Thomas Handorf, O. Ebenhöh, 2007, Genome informatics. International Conference on Genome Informatics.

Stoichiometric design of metabolic networks: Multifunctionality, clusters, optimization, weak and strong robustness

Oliver Ebenhöh, Reinhart Heinrich, Reinhart Heinrich, 2003, Bulletin of mathematical biology.

Expanding Metabolic Networks: Scopes of Compounds, Robustness, and Evolution

Oliver Ebenhöh, Thomas Handorf, Reinhart Heinrich, 2005, Journal of Molecular Evolution.

Ground State Robustness as an Evolutionary Design Principle in Signaling Networks

Oliver Ebenhöh, O. Ebenhöh, Ö. Kartal, 2009, PloS one.

Biosynthetic potentials from species-specific metabolic networks.

Oliver Ebenhöh, Zoran Nikoloski, Thomas Handorf, 2008, Genome informatics. International Conference on Genome Informatics.

A Diverse Community To Study Communities: Integration of Experiments and Mathematical Models To Study Microbial Consortia

Oliver Ebenhöh, Antonella Succurro, A. Succurro, 2017, Journal of bacteriology.

An environmental perspective on metabolism.

Oliver Ebenhöh, Daniel Kahn, Thomas Handorf, 2008, Journal of theoretical biology.