Praveen Sethupathy

发表

Accurate microRNA target prediction correlates with protein repression levels

Nectarios Koziris, Timos K. Sellis, Panayiotis Tsanakas, 2009, BMC Bioinformatics.

A Tutorial of the Poisson Random Field Model in Population Genetics

Praveen Sethupathy, Sridhar Hannenhalli, P. Sethupathy, 2008, Adv. Bioinformatics.

Promoter-proximal CCCTC-factor binding is associated with an increase in the transcriptional pausing index

Praveen Sethupathy, Sur Herrera Paredes, Michael F. Melgar, 2013, Bioinform..

miRquant 2.0: an Expanded Tool for Accurate Annotation and Quantification of MicroRNAs and their isomiRs from Small RNA-Sequencing Data

Praveen Sethupathy, Matthew Kanke, Jeanette Baran-Gale, 2016, Journal of integrative bioinformatics.

Computational Identification of Regulatory Factors Involved in MicroRNA Transcription

Molly Megraw, Artemis G. Hatzigeorgiou, Praveen Sethupathy, 2005, Panhellenic Conference on Informatics.

tDRmapper: challenges and solutions to mapping, naming, and quantifying tRNA-derived RNAs from human small RNA-sequencing data

Praveen Sethupathy, Sara R. Selitsky, 2015, BMC Bioinformatics.

The database of experimentally supported targets: a functional update of TarBase

Martin Reczko, Artemis G. Hatzigeorgiou, Giorgos L. Papadopoulos, 2008, Nucleic Acids Res..

A model of electrophysiological heterogeneity in periglomerular cells

Praveen Sethupathy, Guo-Shi Li, Thomas A. Cleland, 2013, Front. Comput. Neurosci..

Transcriptomic analysis of human liver identifies a novel class of regulatory RNAs in chronic viral hepatitis and associated cancer

Praveen Sethupathy, 2014, IWBBIO.

miRquant 2.0: an Expanded Tool for Accurate Annotation and Quantification of MicroRNAs and their isomiRs from Small RNA-Sequencing Data.

Praveen Sethupathy, Matthew Kanke, Jonathan Villanueva, 2016, Journal of integrative bioinformatics.

A Suite of Resources for the Study of microRNA Ontology and Function

Molly Megraw, Artemis G. Hatzigeorgiou, Praveen Sethupathy, 2009 .

miRGen: a database for the study of animal microRNA genomic organization and function

Molly Megraw, Artemis G. Hatzigeorgiou, Praveen Sethupathy, 2006, Nucleic Acids Res..

Genomic and epigenetic alterations deregulate microRNA expression in human epithelial ovarian cancer

Artemis G. Hatzigeorgiou, Victor A. Simossis, Praveen Sethupathy, 2008, Proceedings of the National Academy of Sciences.

HDL-transferred microRNA-223 regulates ICAM-1 expression in endothelial cells

Praveen Sethupathy, P. Sethupathy, P. Barter, 2014, Nature Communications.

Small tRNA-derived RNAs are increased and more abundant than microRNAs in chronic hepatitis B and C

Praveen Sethupathy, Takahiro Masaki, Masao Honda, 2015, Scientific Reports.

Fine-Mapping and Initial Characterization of QT Interval Loci in African Americans

Karen L. Mohlke, Praveen Sethupathy, Lucia A. Hindorff, 2012, PLoS genetics.

The Promise and Challenge of Therapeutic MicroRNA Silencing in Diabetes and Metabolic Diseases

Praveen Sethupathy, P. Sethupathy, 2016, Current Diabetes Reports.

Functional Transcriptomics in Diverse Intestinal Epithelial Cell Types Reveals Robust MicroRNA Sensitivity in Intestinal Stem Cells to Microbial Status*

Praveen Sethupathy, P. Sethupathy, Bailey C E Peck, 2017, The Journal of Biological Chemistry.

Complexity of microRNA function and the role of isomiRs in lipid homeostasis

Alan T. Remaley, Praveen Sethupathy, Kasey C. Vickers, 2013, Journal of Lipid Research.

Human microRNA-155 on chromosome 21 differentially interacts with its polymorphic target in the AGTR1 3' untranslated region: a mechanism for functional single-nucleotide polymorphisms related to phenotypes.

Praveen Sethupathy, Artemis G Hatzigeorgiou, Gregory R Grant, 2007, American journal of human genetics.

Non-topographical contrast enhancement in the olfactory bulb

Praveen Sethupathy, Thomas A Cleland, P. Sethupathy, 2006, BMC Neuroscience.

Global epigenomic analysis of primary human pancreatic islets provides insights into type 2 diabetes susceptibility loci.

Stephen C. J. Parker, Ryan Welch, Praveen Sethupathy, 2010, Cell metabolism.

Prioritization of Genetic Variants in the microRNA Regulome as Functional Candidates in Genome-Wide Association Studies

Praveen Sethupathy, Sara R. Selitsky, Brendan Bulik-Sullivan, 2013, Human mutation.

Needles in the genetic haystack of lipid disorders: single nucleotide polymorphisms in the microRNA regulome

Praveen Sethupathy, P. Sethupathy, 2013, Journal of Lipid Research.

New genetic loci implicated in fasting glucose homeostasis and their impact on type 2 diabetes risk

Christian Gieger, Alex Doney, Inês Barroso, 2010, Nature Genetics.

Transcriptomic Analysis of Chronic Hepatitis B and C and Liver Cancer Reveals MicroRNA-Mediated Control of Cholesterol Synthesis Programs

Praveen Sethupathy, Masao Honda, Shuichi Kaneko, 2015, mBio.

Long Noncoding RNA Moderates MicroRNA Activity to Maintain Self-Renewal in Embryonic Stem Cells

Praveen Sethupathy, Terry Magnuson, Joshua Starmer, 2017, Stem cell reports.

MicroRNAs Classify Different Disease Behavior Phenotypes of Crohn's Disease and May Have Prognostic Utility

Terrence S. Furey, Praveen Sethupathy, Millie D. Long, 2015, Inflammatory bowel diseases.

Addressing Bias in Small RNA Library Preparation for Sequencing: A New Protocol Recovers MicroRNAs that Evade Capture by Current Methods

Praveen Sethupathy, Peter S. Chines, Alice Young, 2015, Front. Genet..

MicroRNA target site polymorphisms and human disease.

Praveen Sethupathy, Francis S Collins, F. Collins, 2008, Trends in genetics : TIG.

A Systematic Mapping Approach of 16q12.2/FTO and BMI in More Than 20,000 African Americans Narrows in on the Underlying Functional Variation: Results from the Population Architecture using Genomics and Epidemiology (PAGE) Study

Dana C. Crawford, Praveen Sethupathy, Lucia A. Hindorff, 2013, PLoS genetics.