Ying S. Ting

发表

Multiplexed Data Independent Acquisition for Comparative Proteomics

Brendan MacLean, Michael J. MacCoss, Christine C. Wu, 2012 .

Comprehensive peptide quantification for data independent acquisition mass spectrometry using chromatogram libraries

Michael J. MacCoss, Brian C. Searle, Judit Villén, 2018, bioRxiv.

The Role of Mass Spectrometry and Proteogenomics in the Advancement of HLA Epitope Prediction

Jennifer G. Abelin, Ying S. Ting, Michael S. Rooney, 2018, Proteomics.

A Phase Ib Trial of Personalized Neoantigen Therapy Plus Anti-PD-1 in Patients with Advanced Melanoma, Non-small Cell Lung Cancer, or Bladder Cancer

Ying S. Ting, R. Govindan, Michael S. Rooney, 2020, Cell.

Defining HLA-II Ligand Processing and Binding Rules with Mass Spectrometry Enhances Cancer Epitope Prediction.

Jennifer G. Abelin, Ying S. Ting, Michael S. Rooney, 2019, Immunity.

MS analysis of a dilution series of bacteria:phytoplankton to improve detection of low abundance bacterial peptides

Ying S. Ting, Molly P. Mikan, B. Nunn, 2018, Scientific Reports.

Chromatogram libraries improve peptide detection and quantification by data independent acquisition mass spectrometry

Michael J MacCoss, Lindsay K Pino, Brian C Searle, 2018, Nature Communications.

Statistical control of peptide and protein error rates in large-scale targeted DIA analyses

Michael J MacCoss, Alexey I Nesvizhskii, Ruedi Aebersold, 2017, Nature Methods.

PECAN: Library Free Peptide Detection for Data-Independent Acquisition Tandem Mass Spectrometry Data

Samuel H Payne, Michael J MacCoss, William Stafford Noble, 2017, Nature Methods.

Shifting the Paradigm: Peptide-Centric Analysis of Systematically Sampled Mass Spectrometry Data

Ying S. Ting, Y. S. Ting, 2016 .

Highly Parallel Quantification and Compartment Localization of Transcription Factors and Nuclear Proteins.

Alexander J. Federation, Gennifer E. Merrihew, Ying S. Ting, 2020, Cell reports.

Multiplexed MS/MS for Improved Data Independent Acquisition

Jarrett D. Egertson, Gennifer E. Merrihew, Ying S. Ting, 2013, Nature Methods.

Comparative metaproteomics reveals ocean-scale shifts in microbial nutrient utilization and energy transduction

David R Goodlett, Ying S Ting, Brook L Nunn, 2010, The ISME Journal.

Late-life restoration of mitochondrial function reverses cardiac dysfunction in old mice

Gennifer E. Merrihew, Ying S. Ting, Lindsay K. Pino, 2020, bioRxiv.

Peptide-Centric Proteome Analysis: An Alternative Strategy for the Analysis of Tandem Mass Spectrometry Data*

Samuel H Payne, Michael J MacCoss, William Stafford Noble, 2015, Molecular & Cellular Proteomics.

Metabolic capabilities and systems fluctuations in Haloarcula marismortui revealed by integrative genomics and proteomics analyses.

Ying S. Ting, D. Goodlett, Wailap V. Ng, 2011, Journal of proteome research.

New structural proteins of Halobacterium salinarum gas vesicle revealed by comparative proteomics analysis.

Ying S. Ting, D. Goodlett, S. Shaffer, 2011, Journal of Proteome Research.

Quantification of nuclear protein dynamics reveals chromatin remodeling during acute protein degradation

Alexander J. Federation, Gennifer E. Merrihew, Ying S. Ting, 2018, bioRxiv.

Defining HLA-II ligand processing and binding rules with mass spectrometry enhances cancer epitope prediction.

Jennifer G. Abelin, Ying S. Ting, Michael S. Rooney, 2021, Immunity.

Automated Lipid A Structure Assignment from Hierarchical Tandem Mass Spectrometry Data

Ying S. Ting, Jace W. Jones, D. Goodlett, 2011, Journal of the American Society for Mass Spectrometry.

Statistical control of peptide and protein error rates in large-scale targeted data-independent acquisition analyses in

Patrick G. A. Pedrioli, Ben C. Collins, Ying S. Ting, 2017 .

Protein Identification Using Top-Down Spectra*

Ying S. Ting, Richard D. Smith, P. Pevzner, 2012, Molecular & Cellular Proteomics.

The path to preservation: Using proteomics to decipher the fate of diatom proteins during microbial degradation

Ying S. Ting, B. Nunn, D. Goodlett, 2010 .

Surface acoustic wave nebulization facilitating lipid mass spectrometric analysis.

Yuchieh Kao, David R Goodlett, Ying S Ting, 2012, Analytical chemistry.

Proteomic analyses of nucleus laminaris identified candidate targets of the fragile X mental retardation protein

William Stafford Noble, Ying S. Ting, M. MacCoss, 2017, The Journal of comparative neurology.

Late-life restoration of mitochondrial function reverses cardiac dysfunction in old mice

Gennifer E. Merrihew, Ying S. Ting, Lindsay K. Pino, 2020, bioRxiv.

New structural proteins of Halobacterium salinarum gas vesicle revealed by comparative proteomics analysis.

Ying S. Ting, D. Goodlett, S. Shaffer, 2011, Journal of proteome research.