Bryan S. Der

发表

Prashant Vaidyanathan, Swapnil Bhatia, Douglas Densmore, 2015, Proceedings of the IEEE.

A Framework for Genetic Logic Synthesis In this paper, the authors introduce af ramework to address the challenges of applying logic synthesis techniques to genetic logic devices.

Prashant Vaidyanathan, Swapnil Bhatia, Douglas Densmore, 2015 .

Metal-mediated affinity and orientation specificity in a computationally designed protein homodimer.

Bryan S. Der, B. Kuhlman, T. Szyperski, 2012, Journal of the American Chemical Society.

Serverification of Molecular Modeling Applications: The Rosetta Online Server That Includes Everyone (ROSIE)

Brian D. Weitzner, Jeffrey J. Gray, Bryan S. Der, 2013, PloS one.

Catalysis by a de novo zinc-mediated protein interface: implications for natural enzyme evolution and rational enzyme engineering.

Brian Kuhlman, Bryan S. Der, Bryan S Der, 2012, Biochemistry.

Alternative Computational Protocols for Supercharging Protein Surfaces for Reversible Unfolding and Retention of Stability

Sergey Lyskov, Brian Kuhlman, Jeffrey J. Gray, 2013, PloS one.

Design of active transport must be highly intricate: a possible role of myosin and Ena/VASP for G-actin transport in filopodia.

Bryan S. Der, Pavel I Zhuravlev, G. Papoian, 2010, Biophysical journal.

Genetic circuit characterization and debugging using RNA‐seq

Alec A K Nielsen, Alec A. K. Nielsen, Bryan S. Der, 2017, Molecular systems biology.

Internal workings of a genetic circuit

Christopher A. Voigt, Alec A K Nielsen, Amin Espah Borujeni, 2017 .

Genetic circuit design automation

Christopher A. Voigt, Alec A K Nielsen, Alec A. K. Nielsen, 2016, Science.

From Computational Design to a Protein That Binds

Brian Kuhlman, Bryan S. Der, B. Kuhlman, 2011, Science.

Structure-based design of supercharged, highly thermoresistant antibodies.

Brian Kuhlman, Jeffrey J. Gray, George Georgiou, 2012, Chemistry & biology.

Computational de novo design of a four‐helix bundle protein—DND_4HB

Thomas Szyperski, Brian Kuhlman, Bryan S. Der, 2015, Protein science : a publication of the Protein Society.

Computer-based Engineering of Thermostabilized Antibody Fragments.

Jeffrey J. Gray, R. A. Hughes, Bryan S. Der, 2019, AIChE journal. American Institute of Chemical Engineers.

Amino acid transport in thermophiles: characterization of an arginine-binding protein in Thermotoga maritima. 2. Molecular organization and structural stability.

Bryan S. Der, Matthew S. Luchansky, S. d'Auria, 2010, Molecular bioSystems.

Evolution of a highly active and enantiospecific metalloenzyme from short peptides

Bryan S. Der, B. Kuhlman, D. Hilvert, 2018, Science.

Probing the minimal determinants of zinc binding with computational protein design.

Bryan S. Der, B. Kuhlman, Sharon L. Guffy, 2016, Protein engineering, design & selection : PEDS.

Amino acid transport in thermophiles : characterization of an arginine-binding protein in Thermotoga maritima w

Bryan S. Der, Matthew S. Luchansky, S. d'Auria, 2015 .

Amino acid transport in thermophiles: characterization of an arginine-binding protein in Thermotoga maritima.

Gabriella Pocsfalvi, Sabato D'Auria, Bryan S. Der, 2009, Molecular bioSystems.

DNAplotlib: Programmable Visualization of Genetic Designs and Associated Data.

Thomas E Gorochowski, Christopher A Voigt, Bryan A Bartley, 2017, ACS synthetic biology.

Programming Escherichia coli to function as a digital display

Christopher A. Voigt, Christopher A Voigt, Alec A. K. Nielsen, 2020, Molecular systems biology.

Crystallization and preliminary X-ray crystallographic analysis of ligand-free and arginine-bound forms of Thermotoga maritima arginine-binding protein.

Bryan S. Der, Matthew S. Luchansky, R. Berisio, 2011, Acta crystallographica. Section F, Structural biology and crystallization communications.

Combined computational design of a zinc‐binding site and a protein–protein interaction: One open zinc coordination site was not a robust hotspot for de novo ubiquitin binding

Steven M. Lewis, Bryan S. Der, B. Kuhlman, 2013, Proteins.

Erratum to Originally published in PROTEINS: Structure, Function, and Bioinformatics [81(7), (2013), 1245-1255] DOI:10.1002/prot.24280

Steven M. Lewis, Bryan S. Der, B. Kuhlman, 2013 .

Construction of a reagentless glucose biosensor using molecular exciton luminescence.

Bryan S. Der, J. Dattelbaum, 2008, Analytical biochemistry.

Strategies to control the binding mode of de novo designed protein interactions.

Brian Kuhlman, Bryan S. Der, Bryan S Der, 2013, Current opinion in structural biology.

Analysis of ligand binding to a ribose biosensor using site‐directed mutagenesis and fluorescence spectroscopy

Bryan S. Der, J. Dattelbaum, J. M. Fox, 2007, Protein science : a publication of the Protein Society.

Computational de novo design of a four‐helix bundle protein—DND_4HB

Bryan S. Der, Surya V. S. R. K. Pulavarti, B. Kuhlman, 2015, Protein science : a publication of the Protein Society.

Metal-mediated affinity and orientation specificity in a computationally designed protein homodimer.

Bryan S. Der, B. Kuhlman, T. Szyperski, 2012, Journal of the American Chemical Society.

Structure-based design of supercharged, highly thermoresistant antibodies.

Jeffrey J. Gray, Alena M Calm, Bryan S. Der, 2012, Chemistry & biology.

Genetic circuit design automation

Christopher A. Voigt, Alec A. K. Nielsen, Bryan S. Der, 2016, Science.