Lihua Julie Zhu

发表

OneStopRNAseq: A Web Application for Comprehensive and Efficient Analyses of RNA-Seq Data

Rui Li, Kai Hu, Haibo Liu, 2020, Genes.

Zinc finger protein-dependent and -independent contributions to the in vivo off-target activity of zinc finger nucleases

Lihua Julie Zhu, Xiangdong Meng, Ankit Gupta, 2010, Nucleic Acids Res..

Publisher Correction: Orthogonal Cas9-Cas9 chimeras provide a versatile platform for genome editing

Ankit Gupta, Lihua Julie Zhu, Mehmet Fatih Bolukbasi, 2018, Nature Communications.

Interpreting microarray results with gene ontology and MeSH.

Lihua Julie Zhu, John D Osborne, Simon M Lin, 2007, Methods in molecular biology.

ChIPpeakAnno: a Bioconductor package to annotate ChIP-seq and ChIP-chip data

David S. Lapointe, Lihua Julie Zhu, Simon M. Lin, 2010, BMC Bioinformatics.

Efficient Homology-directed Repair with Circular ssDNA Donors

Lihua Julie Zhu, Scot A. Wolfe, Pengpeng Liu, 2019, bioRxiv.

dagLogo: An R/Bioconductor package for identifying and visualizing differential amino acid group usage in proteomics data

Haibo Liu, Lihua Julie Zhu, Alexey Stukalov, 2020, bioRxiv.

Accurate identification of polyadenylation sites from 3′ end deep sequencing using a naïve Bayes classifier

Lihua Julie Zhu, Nathan D. Lawson, Sarah Sheppard, 2014, Bioinform..

FlyFactorSurvey: a database of Drosophila transcription factor binding specificities determined using the bacterial one-hybrid system

Saurabh Sinha, David S. Lapointe, Lihua Julie Zhu, 2010, Nucleic Acids Res..

Accurate identification of polyadenylation sites from 3′ end deep sequencing using a naïve Bayes classifier

Lihua Julie Zhu, Nathan D. Lawson, Sarah Sheppard, 2013, Bioinform..

GS-Preprocess: Containerized GUIDE-seq Data Analysis Tools with Diverse Sequencer Compatibility

Lihua Julie Zhu, Nadia Amrani, Pengpeng Liu, 2020 .

dagLogo: An R/Bioconductor package for identifying and visualizing differential amino acid group usage in proteomics data

Haibo Liu, Michael R Green, Lihua Julie Zhu, 2020, PloS one.

motifStack for the analysis of transcription factor binding site evolution

Lihua Julie Zhu, Scot A Wolfe, Jianhong Ou, 2018, Nature Methods.

Adenine base editing in an adult mouse model of tyrosinemia

Lihua Julie Zhu, Hao Yin, Maria Paz Zafra, 2019, Nature Biomedical Engineering.

Partial DNA-guided Cas9 enables genome editing with reduced off-target activity.

Robert Langer, Lihua Julie Zhu, Hao Yin, 2018, Nature chemical biology.

miR-146a promotes the initiation and progression of melanoma by activating Notch signaling

Michael R Green, Lihua Julie Zhu, Michael R. Green, 2014, eLife.

Integration of Metabolic and Gene Regulatory Networks Modulates the C. elegans Dietary Response

Lihua Julie Zhu, A. J. Walhout, L. Zhu, 2013, Cell.

ATACseqQC: a Bioconductor package for post-alignment quality assessment of ATAC-seq data

Jun Yu, Lihua Julie Zhu, Nathan D. Lawson, 2018, BMC Genomics.

Enhanced Cas12a editing in mammalian cells and zebrafish

Lihua Julie Zhu, Jeremy Luban, Masahiro Shin, 2019, Nucleic acids research.

Overview of guide RNA design tools for CRISPR-Cas9 genome editing technology

Lihua Julie Zhu, L. Zhu, 2015, Frontiers in Biology.

Integrative analysis of ChIP-chip and ChIP-seq dataset.

Lihua Julie Zhu, L. Zhu, 2013, Methods in molecular biology.