Leho Tedersoo

发表

TRY plant trait database - enhanced coverage and open access.

Denis Bastianelli, Yuanzhi Li, Ben Somers, 2019, Global change biology.

The UNITE database for molecular identification of fungi: handling dark taxa and parallel taxonomic classifications

R. Henrik Nilsson, Frank Oliver Glöckner, Kessy Abarenkov, 2018, Nucleic Acids Res..

The Taxon Hypothesis Paradigm—On the Unambiguous Detection and Communication of Taxa

Kessy Abarenkov, Karl-Henrik Larsson, Dmitry Schigel, 2020, Microorganisms.

Relative performance of Oxford Nanopore MinION vs. Pacific Biosciences Sequel third-generation sequencing platforms in identification of agricultural and forest pathogens

Mohammad Bahram, Leho Tedersoo, Kaire Loit, 2019, bioRxiv.

PlutoF—a Web Based Workbench for Ecological and Taxonomic Research, with an Online Implementation for Fungal ITS Sequences

R. Henrik Nilsson, Kessy Abarenkov, Karl-Henrik Larsson, 2010, Evolutionary Bioinformatics Online.

Finding needles in haystacks: linking scientific names, reference specimens and molecular data for Fungi

R. Henrik Nilsson, Kazuaki Tanaka, Qing Cai, 2014, Database J. Biol. Databases Curation.

PipeCraft: Flexible open‐source toolkit for bioinformatics analysis of custom high‐throughput amplicon sequencing data

Mohammad Bahram, Leho Tedersoo, Sten Anslan, 2017, Molecular ecology resources.

Novel soil-inhabiting clades fill gaps in the fungal tree of life

R. Henrik Nilsson, Mohammad Bahram, Timothy Y. James, 2017, Microbiome.

Early successional ectomycorrhizal fungi are more likely to naturalize outside their native range than other ectomycorrhizal fungi.

Jana Albrechtová, Petr Kohout, Petr Baldrian, 2020, The New phytologist.

Global gaps in soil biodiversity data

Erin K. Cameron, Nico Eisenhauer, Olga Ferlian, 2018, Nature Ecology & Evolution.

Does a fungal species drive ectomycorrhizal root traits in Alnus spp.

Ivika Ostonen, Leho Tedersoo, L. Tedersoo, 2009 .

A Comprehensive, Automatically Updated Fungal ITS Sequence Dataset for Reference-Based Chimera Control in Environmental Sequencing Efforts

R. Henrik Nilsson, Erik Kristiansson, Kessy Abarenkov, 2015, Microbes and environments.

Five simple guidelines for establishing basic authenticity and reliability of newly generated fungal ITS sequences.

R. Henrik Nilsson, Erik Kristiansson, Nils Hallenberg, 2012 .

Fungal identification biases in microbiome projects.

Leho Tedersoo, Björn Lindahl, L. Tedersoo, 2016, Environmental microbiology reports.

High-level classification of the Fungi and a tool for evolutionary ecological analyses

Kessy Abarenkov, Dmitry Schigel, Martin Ryberg, 2018, Fungal Diversity.

Incorporating molecular data in fungal systematics: a guide for aspiring researchers

Erik Kristiansson, Kevin D. Hyde, Kessy Abarenkov, 2013, 1302.3244.

Top 50 most wanted fungi

R. Henrik Nilsson, Erik Kristiansson, Kessy Abarenkov, 2016 .

DNA metabarcoding—Need for robust experimental designs to draw sound ecological conclusions

Noah Fierer, Frédéric Boyer, Pierre Taberlet, 2019, Molecular ecology.

UNITE: a database providing web-based methods for the molecular identification of ectomycorrhizal fungi.

Robin Sen, Kessy Abarenkov, Karl-Henrik Larsson, 2005, The New phytologist.

Tidying up international nucleotide sequence databases

R. Henrik Nilsson, Petr Kohout, Kessy Abarenkov, 2011 .

Structure and function of the global topsoil microbiome

Falk Hildebrand, Peer Bork, Sofia K. Forslund, 2018, Nature.

Millions of reads, thousands of taxa: microbial community structure and associations analyzed via marker genes.

Karoline Faust, Mohammad Bahram, Miklós Bálint, 2016, FEMS microbiology reviews.

Standardizing metadata and taxonomic identification in metabarcoding studies

Kessy Abarenkov, Urmas Kõljalg, Aivi Kaljuvee, 2015, GigaScience.

Network perspectives of ectomycorrhizal associations

Mohammad Bahram, Leho Tedersoo, L. Tedersoo, 2014 .

Tidying Up International Nucleotide Sequence Databases: Ecological, Geographical and Sequence Quality Annotation of ITS Sequences of Mycorrhizal Fungi

R. Henrik Nilsson, Petr Kohout, Kessy Abarenkov, 2011, PloS one.

FungalTraits: a user-friendly traits database of fungi and fungus-like stramenopiles

Martti Vasar, Hans-Peter Grossart, M. Catherine Aime, 2020, Fungal Diversity.

Forewarned is forearmed: harmonized approaches for early detection of potentially invasive pests and pathogens in sentinel plantings

Johanna Witzell, Alberto Santini, Marc Kenis, 2019, NeoBiota.

Fungal community analysis by high-throughput sequencing of amplified markers – a user's guide

Kessy Abarenkov, Urmas Kõljalg, Søren Rosendahl, 2013, The New phytologist.

Improving ITS sequence data for identification of plant pathogenic fungi

R. Henrik Nilsson, Daniel Lindner, Kevin D. Hyde, 2014, Fungal Diversity.

Towards standardization of the description and publication of next-generation sequencing datasets of fungal communities.

Kessy Abarenkov, Karl-Henrik Larsson, Christopher Quince, 2011, The New phytologist.

Towards a unified paradigm for sequence‐based identification of fungi

Michael Weiss, Petr Kohout, Kessy Abarenkov, 2013, Molecular ecology.

Global diversity and geography of soil fungi

R. Henrik Nilsson, Erki Saluveer, Petr Kohout, 2014, Science.

Global database of plants with root‐symbiotic nitrogen fixation: NodDB

Meelis Pärtel, Leho Tedersoo, M. Pärtel, 2018 .

Historical Biogeography and Diversification of Truffles in the Tuberaceae and Their Newly Identified Southern Hemisphere Sister Lineage

Akihiko Kinoshita, Rytas Vilgalys, Leho Tedersoo, 2013, PloS one.