Wing Hung Wong

发表

Weighted markov chain monte carlo and optimization

Faming Liang, Wing Hung Wong, 1997 .

DeepTACT: predicting high-resolution chromatin contacts via bootstrapping deep learning

Wing Hung Wong, Wenran Li, Rui Jiang, 2018, bioRxiv.

An improved distance measure between the expression profiles linking co-expression and co-regulation in mouse

Ryung S. Kim, Wing Hung Wong, Hongkai Ji, 2006, BMC Bioinformatics.

A 7.11mJ/Gb/query data-driven machine learning processor (D2MLP) for big data analysis and applications

Hsie-Chia Chang, Chen-Yi Lee, Shu-Yu Hsu, 2014, 2014 Symposium on VLSI Circuits Digest of Technical Papers.

ChipInfo: software for extracting gene annotation and gene ontology information for microarray analysis

Sheng Zhong, Cheng Li, Wing Hung Wong, 2003, Nucleic Acids Res..

CisGenome Browser: a flexible tool for genomic data visualization

Fan Wang, Wing Hung Wong, Hui Jiang, 2010, Bioinform..

Scalable multi-sample single-cell data analysis by Partition-Assisted Clustering and Multiple Alignments of Networks

Xiaowei Wang, Wing Hung Wong, Nikolay Samusik, 2017, bioRxiv.

Comparative analysis of gene sets in the gene ontology space under the multiple hypothesis testing framework

Lu Tian, Sheng Zhong, Cheng Li, 2004 .

Parallel Computing In Bayesian Image Reconstruction

Chin-Tu Chen, Wing Hung Wong, C. E. Ordonez, 1990, [1990] Proceedings of the Twelfth Annual International Conference of the IEEE Engineering in Medicine and Biology Society.

Simultaneous inference of phenotype-associated genes and relevant tissues from GWAS data via Bayesian integration of multiple tissue-specific gene networks

Rui Jiang, Wing Hung Wong, Ting Chen, 2017, Journal of molecular cell biology.

Low-level analysis of oligonucleotide expression arrays

Wing Hung Wong, Xuemin Fang, Cheng Li, 2005 .

Towards ubiquitous bio-information computing: data protocols, middleware, and Web services for heterogeneous biological information integration and retrieval

Sheng Zhong, Pengyu Hong, Wing Hung Wong, 2004, Proceedings. Fourth IEEE Symposium on Bioinformatics and Bioengineering.

QuatNet: Quaternion-Based Head Pose Estimation With Multiregression Loss

Sheng Wan, Chen-Yi Lee, Wing Hung Wong, 2019, IEEE Transactions on Multimedia.

Bayesian Analysis in Applications of Hierarchical Models: Issues and Methods

Wing Hung Wong, Anthony S. Bryk, Michael Seltzer, 1996 .

SeqMap: mapping massive amount of oligonucleotides to the genome

Wing Hung Wong, Hui Jiang, W. Wong, 2008, Bioinform..

In silico prediction of transcription factors that interact with the E2F family of transcription factors

Qing Zhou, Sheng Zhong, Wing Hung Wong, 2004, ICARCV 2004 8th Control, Automation, Robotics and Vision Conference, 2004..

Simultaneous dimension reduction and adjustment for confounding variation

Can Yang, Bai Jiang, Yong Wang, 2016, Proceedings of the National Academy of Sciences.

Towards high performance data analytic on heterogeneous many-core systems: A study on Bayesian Sequential Partitioning

Bo-Cheng Lai, Wing Hung Wong, Chia-Ying Lee, 2018, J. Parallel Distributed Comput..

Comparative analysis of gene sets in the gene ontology space under the multiple hypothesis testing framework

Lu Tian, Sheng Zhong, Cheng Li, 2004, Proceedings. 2004 IEEE Computational Systems Bioinformatics Conference, 2004. CSB 2004..

DC3 is a method for deconvolution and coupled clustering from bulk and single-cell genomics data

Yong Wang, Wing Hung Wong, Zhana Duren, 2019, Nature Communications.

Modeling stochastic noise in gene regulatory systems

Wing Hung Wong, Chao Du, Ye Henry Li, 2014, Quantitative Biology.

Feature Consistency Training With JPEG Compressed Images

Chen-Yi Lee, Wing Hung Wong, Tung-Yu Wu, 2020, IEEE Transactions on Circuits and Systems for Video Technology.

Computational Developments of ψ-learning

Xiaotong Shen, Wing Hung Wong, Sijin Liu, 2005, SDM.

Meta-analysis of peptides to detect protein significance.

Yuping Zhang, Wing Hung Wong, Wei-Jun Qian, 2020, Statistics and its interface.

A 41.3pJ/26.7pJ per neuron weight RBM processor for on-chip learning/inference applications

Chen-Yi Lee, Wing Hung Wong, Chang-Hung Tsai, 2016, 2016 IEEE Asian Solid-State Circuits Conference (A-SSCC).

ATTENUATION CORRECTION IN SPECT: A COMPARATIVE STUDY AND A NEW HYBRID APPROACH

Chin-Tu Chen, Wing Hung Wong, X. Pan, 1992 .

Incorporation of correlated structural images in PET image reconstruction

Chin-Tu Chen, Xiaoping Hu, Valen E. Johnson, 1994, IEEE Trans. Medical Imaging.

Progress and lessons in the analysis of microarray data

Wing Hung Wong, 2002 .

A boosting approach for motif modeling using ChIP-chip data

Qing Zhou, Xin Lu, Pengyu Hong, 2005, Bioinform..

Inferring Loss-of-Heterozygosity from Unpaired Tumors Using High-Density Oligonucleotide SNP Arrays

Wing Hung Wong, Rameen Beroukhim, Levi A Garraway, 2006, PLoS Comput. Biol..

Diabetic Retinopathy Detection Based on Deep Convolutional Neural Networks

Chen-Yi Lee, Yi-Wei Chen, Wing Hung Wong, 2018, 2018 IEEE International Conference on Acoustics, Speech and Signal Processing (ICASSP).

Integrative analysis of single-cell genomics data by coupled nonnegative matrix factorizations

Yong Wang, Wing Hung Wong, Howard Y. Chang, 2018, Proceedings of the National Academy of Sciences.

Determination of Local Statistical Significance of Patterns in Markov Sequences with Application to Promoter Element Identification

Wing Hung Wong, Haiyan Huang, Jun S. Liu, 2004, J. Comput. Biol..

Incorporation of structural CT and MR images in PET image reconstruction

Chin-Tu Chen, Charles E. Metz, Wing Hung Wong, 1991, Medical Imaging.

A Hardware-Efficient Sigmoid Function With Adjustable Precision for a Neural Network System

Chen-Yi Lee, Wing Hung Wong, Chang-Hung Tsai, 2015, IEEE Transactions on Circuits and Systems II: Express Briefs.

Dynamic weighting Monte Carlo for constrained floorplan designs in mixed signal application

Faming Liang, Jason Cong, Wing Hung Wong, 2000, ASP-DAC '00.

Density Estimation via Discrepancy Based Adaptive Sequential Partition

Kun Yang, Wing Hung Wong, Dangna Li, 2016, NIPS.

Dynamic weighting Monte Carlo for constrained floorplan designs in mixed signal application

Faming Liang, Jason Cong, Wing Hung Wong, 2000, Proceedings 2000. Design Automation Conference. (IEEE Cat. No.00CH37106).

A method for tight clustering: with application to microarray

Wing Hung Wong, George C. Tseng, 2003, Computational Systems Bioinformatics. CSB2003. Proceedings of the 2003 IEEE Bioinformatics Conference. CSB2003.

Statistical inferences for isoform expression in RNA-Seq

Wing Hung Wong, Hui Jiang, W. Wong, 2009, Bioinform..

Roundtrip: A Deep Generative Neural Density Estimator pdf

Qiao Liu, Rui Jiang, Wing Hung Wong, 2020, ArXiv.

Torsional Relaxation for Biopolymers

Yan Cui, Wing Hung Wong, Run Sheng Chen, 1998, J. Comput. Biol..

A 41.3/26.7 pJ per Neuron Weight RBM Processor Supporting On-Chip Learning/Inference for IoT Applications

Chen-Yi Lee, Wing Hung Wong, Chang-Hung Tsai, 2017, IEEE Journal of Solid-State Circuits.

Recursive Sample Classification and Gene Selection based on SVM: Method and Software Description #

Xuegong Zhang, Wing Hung Wong, Xuegong Zhang, 2001 .

Conditional entropy coding of VQ indexes for image compression

Xiaolin Wu, Jiang Wen, Wing Hung Wong, 1999, IEEE Trans. Image Process..

Cross-hybridization modeling on Affymetrix exon arrays

Wing Hung Wong, Yi Xing, Hui Jiang, 2008, Bioinform..

GeneNotes – A novel information management software for biologists

Pengyu Hong, Wing Hung Wong, W. Wong, 2005, BMC Bioinformatics.

Relaxed simulated tempering for VLSI floorplan designs

Faming Liang, Jason Cong, Wing Hung Wong, 1999, Proceedings of the ASP-DAC '99 Asia and South Pacific Design Automation Conference 1999 (Cat. No.99EX198).

Statistical Modeling of RNA-Seq Data.

Hui Jiang, Julia Salzman, Wing Hung Wong, 2011, Statistical science : a review journal of the Institute of Mathematical Statistics.

dChipSNP: significance curve and clustering of SNP-array-based loss-of-heterozygosity data

Cheng Li, Ming Lin, Wing Hung Wong, 2004, Bioinform..

Data-Based Nonparametric Estimation of the Hazard Function with Applications to Model Diagnostics and Exploratory Analysis

Wing Hung Wong, Martin A. Tanner, W. Wong, 1984 .

Scalable Multi-Sample Single-Cell Data Analysis by Partition-Assisted Clustering and Multiple Alignments of Networks

Xiaowei Wang, Wing Hung Wong, Nikolay Samusik, 2017 .

Sensor fusion in image reconstruction

Chin-Tu Chen, Xiaoping Hu, Valen E. Johnson, 1990 .

Towards Ubiquitous Bio-Information Computing: Data Protocols, Middleware, and Web Services for Heterogeneous Biological Information Integration and Retrieval

Sheng Zhong, Pengyu Hong, Wing Hung Wong, 2004, BIBE.

Analytical Considerations of Photon Attenuation and System Response Function in SPECT Reconstruction

Xiaochuan Pan, Chin-Tu Chen, Wing Hung Wong, 1993, IPMI.

Integrative analysis of single cell genomics data by coupled nonnegative matrix factorizations

Yong Wang, Wing Hung Wong, Howard Y. Chang, 2018 .

TileMap: create chromosomal map of tiling array hybridizations

Wing Hung Wong, Hongkai Ji, W. Wong, 2005, Bioinform..

Image Reconstruction Using A Priori Boundary Information

Chin-Tu Chen, Xiaoping Hu, Valen E. Johnson, 1992 .

Improved Bayesian approach

Xiaochuan Pan, Chin-Tu Chen, Wing Hung Wong, 1995, Optical Engineering Midwest.

Model-Based Approach to the Joint Analysis of Single-Cell Data on Chromatin Accessibility and Gene Expression

Timothy Daley, Wing Hung Wong, Mahdi Zamanighomi, 2020, Statistical Science.

A Sparse Transmission Disequilibrium Test for Haplotypes Based on Bradley-Terry Graphs

Wing Hung Wong, Art B Owen, Li Ma, 2012, Human Heredity.

Improvement of medical images using Bayesian processing

Chin-Tu Chen, Wing Hung Wong, Xiaoping Hu, 1992, Medical Imaging.

Integrated analysis of microarray data and gene function information.

Mi Zhou, Wing Hung Wong, Yan Cui, 2004, Omics : a journal of integrative biology.

Stochastic reconstruction of incomplete data sets using Gibbs priors in positron emission tomography

Chin-Tu Chen, Oscar H. Kapp, Wing Hung Wong, 1992, Electronic Imaging.

VarSim: a simulation validation framework for alignment and variant calling in high-throughput genome sequencing

Mark Gerstein, Jian Li, Alexej Abyzov, 2014 .

Data Augmentation Schemes Applied to Image Restoration

Chin-Tu Chen, Xiaoping Hu, Valen E. Johnson, 1992 .

Identifiability of isoform deconvolution from junction arrays and RNA-Seq

Wing Hung Wong, Weihong Xu, Hui Jiang, 2009, Bioinform..

Comparison study for photon attenuation compensation in SPECT reconstruction

Chin-Tu Chen, Wing Hung Wong, Jigang Liu, 1992, Other Conferences.

A 1.86mJ/Gb/query bit-plane payload machine learning processor in 90nm CMOS

Hsie-Chia Chang, Chen-Yi Lee, Yen-Chin Liao, 2018, 2018 International Symposium on VLSI Design, Automation and Test (VLSI-DAT).

Abstract LB-306: An ensemble approach to accurately detect somatic mutations via adaptive boosting

Wing Hung Wong, Hugo Y. K. Lam, Narges Bani Asadi, 2015 .

Convergence rates of a partition based Bayesian multivariate density estimation method

Wing Hung Wong, Linxi Liu, Dangna Li, 2017, NIPS.

Image Restoration Using Gibbs Priors: Boundary Modeling, Treatment of Blurring, and Selection of Hyperparameter

Chin-Tu Chen, Xiaoping Hu, Valen E. Johnson, 1991, IEEE Trans. Pattern Anal. Mach. Intell..

Conditional entropy coding of VQ indexes for image compression

Xiaolin Wu, Jiang Wen, Wing Hung Wong, 1997, Proceedings DCC '97. Data Compression Conference.

EVOLUTIONARY MONTE CARLO: APPLICATIONS TO Cp MODEL SAMPLING AND CHANGE POINT PROBLEM

Faming Liang, Wing Hung Wong, W. Wong, 2000 .

Improved Bayesian image reconstruction in positron emission tomography

Chien-Min Kao, Xiaochuan Pan, C.-T. Chen, 1995, 1995 IEEE Nuclear Science Symposium and Medical Imaging Conference Record.

Simultaneous deep generative modelling and clustering of single-cell genomic data

Qiao Liu, Rui Jiang, Wing Hung Wong, 2020, Nature Machine Intelligence.

Correlation-Based Face Detection for Recognizing Faces in Videos

Chen-Yi Lee, Wing Hung Wong, Tung-Yu Wu, 2018, 2018 IEEE International Conference on Acoustics, Speech and Signal Processing (ICASSP).

Fast and accurate read alignment for resequencing

Wing Hung Wong, Hui Jiang, Marghoob Mohiyuddin, 2012, Bioinform..

Simultaneous Isoform Discovery and Quantification from RNA-Seq

Wing Hung Wong, David Hiller, W. Wong, 2013, Statistics in biosciences.

DNA-Chip Analyzer (dChip)

Cheng Li, Wing Hung Wong, W. Wong, 2003 .

Completely phased genome sequencing through chromosome sorting

Wing Hung Wong, W. Wong, Xi Chen, 2010, Proceedings of the National Academy of Sciences.

CancerDetector: ultrasensitive and non-invasive cancer detection at the resolution of individual reads using cell-free DNA methylation sequencing data

Frank Alber, Wing Hung Wong, Xianghong Jasmine Zhou, 2018, Nucleic acids research.

Array comparative genome hybridization for tumor classification and gene discovery in mouse models of malignant melanoma.

Wing Hung Wong, Lynda Chin, Xuegong Zhang, 2003, Cancer research.

Predicting transcription factor binding motifs from DNA-binding domains, chromatin accessibility and gene expression data

Rui Jiang, Yong Wang, Wing Hung Wong, 2017, Nucleic acids research.

MADS: a new and improved method for analysis of differential alternative splicing by exon-tiling microarrays.

Hui Jiang, Douglas L Black, Yi Xing, 2008, RNA.

Analysis of factorial time-course microarrays with application to a clinical study of burn injury

Wing Hung Wong, Baiyu Zhou, Wenzhong Xiao, 2010, Proceedings of the National Academy of Sciences.

Unsupervised clustering and epigenetic classification of single cells

Timothy Daley, Wing Hung Wong, Mahdi Zamanighomi, 2017 .

Using high-density exon arrays to profile gene expression in closely related species

Junhee Seok, Yi Xing, Wing Hung Wong, 2009, Nucleic acids research.

RNA sequencing reveals a diverse and dynamic repertoire of the Xenopus tropicalis transcriptome over development

Jason Chuang, Wing Hung Wong, Kin Fai Au, 2012, Genome research.

Exon arrays provide accurate assessments of gene expression

Yi Xing, Wing Hung Wong, Karen Kapur, 2007, Genome Biology.

Novel mechanisms of T-cell and dendritic cell activation revealed by profiling of psoriasis on the 63,100-element oligonucleotide array.

Wing Hung Wong, Alan Menter, James G Krueger, 2003, Physiological genomics.

A Small-Molecule Inhibitor of Mps1 Blocks the Spindle-Checkpoint Response to a Lack of Tension on Mitotic Chromosomes

Andrew W. Murray, Wing Hung Wong, Timothy J. Mitchison, 2005, Current Biology.

Modeling the causal regulatory network by integrating chromatin accessibility and transcriptome data.

Rui Jiang, Wing Hung Wong, Yong Wang, 2016, National science review.

Learning a nonlinear dynamical system model of gene regulation: A perturbed steady-state approach

Wing Hung Wong, Arwen V. Bradley, W. Wong, 2012, 1207.3137.

Methodnon-uniformity in short-read rates in RNA-Seq data

Hui Jiang, Jun Li, Wing Hung Wong, 2010 .

Learning regulatory programs by threshold SVD regression

Luo Xiao, Wing Hung Wong, Xin Ma, 2014, Proceedings of the National Academy of Sciences.

Characterization of the human ESC transcriptome by hybrid sequencing

Wing Hung Wong, Eric E Schadt, Kin Fai Au, 2013, Proceedings of the National Academy of Sciences.

Reconstructing the Energy Landscape of a Distribution from Monte Carlo Samples

Wing Hung Wong, Qing Zhou, W. Wong, 2008, 0901.3999.

Recombinatoric exploration of novel folded structures: A heteropolymer-based model of protein evolutionary landscapes

Erich Bornberg-Bauer, Hue Sun Chan, Wing Hung Wong, 2002, Proceedings of the National Academy of Sciences of the United States of America.

Gaining comprehensive biological insight into the transcriptome by performing a broad-spectrum RNA-seq analysis

Wing Hung Wong, Sayed Mohammad Ebrahim Sahraeian, Kin Fai Au, 2017, Nature Communications.

Using CisGenome to Analyze ChIP‐chip and ChIP‐seq Data

Wing Hung Wong, Hongkai Ji, Hui Jiang, 2011, Current protocols in bioinformatics.

Energy landscape of a spin-glass model: exploration and characterization.

Wing Hung Wong, Qing Zhou, Qing Zhou, 2009, Physical review. E, Statistical, nonlinear, and soft matter physics.

A study of density of states and ground states in hydrophobic-hydrophilic protein folding models by equi-energy sampling.

Wing Hung Wong, S C Kou, S. Kou, 2006, The Journal of chemical physics.

A BOOTSTRAP-BASED NON-PARAMETRIC ANOVA METHOD WITH APPLICATIONS TO FACTORIAL MICROARRAY DATA

Wing Hung Wong, Baiyu Zhou, W. Wong, 2011 .

Comparative linkage analysis and visualization of high-density oligonucleotide SNP array data

Wing Hung Wong, Carsten Rosenow, W. Wong, 2005, BMC Genetics.

Inferring Loss-of-Heterozygosity From Tumor-only Samples Using High-Density Oligonucleotide SNP Arrays

Wing Hung Wong, Rameen Beroukhim, Edward A. Fox, 2022 .

Model-based analysis of oligonucleotide arrays and issues in cDNA microarray analysis

Wing Hung Wong, George C. Tseng, G. Tseng, 2003 .