Shea N. Gardner

发表

saSNP Approach for Scalable SNP Analyses of Multiple Bacterial or Viral Genomes

Tom Slezak, Shea N. Gardner, T. Slezak, 2010 .

Comprehensive and Sensitive Microbial Detection Using A Broad Spectrum Detection Microarray

Jonathan E. Allen, Tom Slezak, Shea N. Gardner, 2015 .

LAVA: An Open-Source Approach To Designing LAMP (Loop-Mediated Isothermal Amplification) DNA Signatures

Brian R. Baker, John M. Dzenitis, Elizabeth A. Vitalis, 2011, BMC Bioinformatics.

Simulate_PCR for amplicon prediction and annotation from multiplex, degenerate primers and probes

Tom Slezak, Shea N. Gardner, T. Slezak, 2014, BMC Bioinformatics.

TaqMan PCR Simulator

Matthew D. Dyer, T. Slezak, Thomas A. Kuczmarski, 2007 .

Scalable metagenomic taxonomy classification using a reference genome database

Maya Gokhale, Jonathan E. Allen, Sasha Ames, 2013, Bioinform..

Identification of SNPs associated with variola virus virulence

Jason H. Moore, Shea N. Gardner, Anne Gatewood Hoen, 2013, BioData Mining.

Multiplex Degenerate Primer Design for Targeted Whole Genome Amplification of Many Viral Genomes

David A. Hysom, Shea N. Gardner, Crystal J. Jaing, 2014, Adv. Bioinformatics.

Comparative Genomics Tools Applied to Bioterrorism Defence

Adam Zemla, Tom Slezak, Carol L. Ecale Zhou, 2003, Briefings Bioinform..

kSNP3.0: SNP detection and phylogenetic analysis of genomes without genome alignment or reference genome

Tom Slezak, Barry G. Hall, Shea N. Gardner, 2015, Bioinform..

Limitations of TaqMan PCR for Detecting Divergent Viral Pathogens Illustrated by Hepatitis A, B, C, and E Viruses and Human Immunodeficiency Virus

Thomas A. Kuczmarski, Elizabeth A. Vitalis, Shea N. Gardner, 2003, Journal of Clinical Microbiology.

Rapid development of nucleic acid diagnostics

J. Patrick Fitch, Stefan Kurtz, Thomas A. Kuczmarski, 2002, Proc. IEEE.

Scalable SNP Analyses of 100+ Bacterial or Viral Genomes

Tom Slezak, Shea N. Gardner, T. Slezak, 2010 .

A revolving dose strategy to delay the evolution of both quantitative vs major monogene resistances to pesticides and drugs

Marc Mangel, Shea N. Gardner, Jonathan Gressel, 1998 .

Searching more genomic sequence with less memory for fast and accurate metagenomic profiling

Jonathan E. Allen, Shea N. Gardner, Maya B. Gokhale, 2016, bioRxiv.

Microbial Profiling of Combat Wound Infection through Detection Microarray and Next-Generation Sequencing

Jonathan E. Allen, Eric A. Elster, Jonathan A. Forsberg, 2014, Journal of Clinical Microbiology.

When Whole-Genome Alignments Just Won't Work: kSNP v2 Software for Alignment-Free SNP Discovery and Phylogenetics of Hundreds of Microbial Genomes

Barry G. Hall, Shea N. Gardner, S. Gardner, 2013, PloS one.

Skip the Alignment: Degenerate, Multiplex Primer and Probe Design Using K-mer Matching Instead of Alignments

Peter L. Williams, Shea N. Gardner, David A. Hysom, 2012, PloS one.

MODELING INVESTMENTS IN SEEDS, CLONAL OFFSPRING, AND TRANSLOCATION IN A CLONAL PLANT

Marc Mangel, Shea N. Gardner, M. Mangel, 1999 .

Sequencing Needs for Viral Diagnostics

Shea N. Gardner, T. Slezak, S. Gardner, 2004, Journal of Clinical Microbiology.

Multiplex primer prediction software for divergent targets

Peter L. Williams, Christine A. Hara, Bill W. Colston, 2009, Nucleic acids research.