Tao Huang

发表

Identifying Patients with Atrioventricular Septal Defect in Down Syndrome Populations by Using Self-Normalizing Neural Networks and Feature Selection

Xiaohua Hu, Xiaoyong Pan, Yu Hang Zhang, 2018, Genes.

The self-organization model reveals systematic characteristics of aging

Xianzheng Sha, Yin Wang, Yixue Li, 2020, Theoretical Biology and Medical Modelling.

Non-Blocking In-Network Caching for High-Capacity Content Routers

Beichuan Zhang, Tian Pan, Tao Huang, 2019, IEEE INFOCOM 2019 - IEEE Conference on Computer Communications Workshops (INFOCOM WKSHPS).

The Design and Implementation of Power Inductor Automatic Test System

Tong Zhai, Tao Huang, Hongzhi Zhao, 2019, 2019 IEEE 4th Advanced Information Technology, Electronic and Automation Control Conference (IAEAC).

Analysis of Expression Pattern of snoRNAs in Different Cancer Types with Machine Learning Algorithms

Lei Chen, Tao Huang, Yu-Dong Cai, 2019, International journal of molecular sciences.

Disease Cluster Detection and Functional Characterization

Tao Huang, Tao Zeng, Wei Guo, 2020, IEEE Access.

An Improved Diploid Genetic Algorithm for Head-Independency Hydro Plant Scheduling

Hui Li, Tao Huang, Jiaping Liao, 2011 .

Editorial: Advanced Big-Data Analysis Methods and Tools for High-Throughput Omics Technologies.

Tao Huang, 2017, Combinatorial chemistry & high throughput screening.

Identification of a precision motion stage based on the Hammerstein-Wiener model

Zhu Zhang, Tao Huang, Yangqiu Xie, 2019, 2019 Chinese Control Conference (CCC).

Computational method for distinguishing lysine acetylation, sumoylation, and ubiquitination using the random forest algorithm with a feature selection procedure.

Tao Huang, Yu-Dong Cai, Jiarui Li, 2017, Combinatorial chemistry & high throughput screening.

Pan-Cancer Classification Based on Self-Normalizing Neural Networks and Feature Selection

Yadong Wang, Junyi Li, Tao Huang, 2020, Frontiers in Bioengineering and Biotechnology.

Identify Key Sequence Features to Improve CRISPR sgRNA Efficacy

Jialiang Yang, Lei Chen, Tao Huang, 2017, IEEE Access.

The self-organization model reveals systematic characteristics of aging

Tao Huang, Yin Wang, Xianzheng Sha, 2018, bioRxiv.

Computational method for identifying malonylation sites by using random forest algorithm.

Tao Huang, Yu-Hang Zhang, ShaoPeng Wang, 2020, Combinatorial chemistry & high throughput screening.

Stability Region Design of Fractional Complex Order $PI^{\lambda+\mu \mathrm{i}}$ Controller Using D Segmentation

Tao Huang, Guangfeng Zhang, Min Zheng, 2019, 2019 6th International Conference on Systems and Informatics (ICSAI).

Identification of synthetic lethality based on a functional network by using machine learning algorithms

Lin Lu, Min Liu, Lei Chen, 2018, Journal of cellular biochemistry.

Analysis and prediction of drug–drug interaction by minimum redundancy maximum relevance and incremental feature selection

Lai Wei, Lei Chen, Tao Huang, 2017, Journal of biomolecular structure & dynamics.

Identification of transcription factors that may reprogram lung adenocarcinoma

Chenglin Liu, Tao Huang, Yudong Cai, 2017, Artif. Intell. Medicine.

Machine learning and graph analytics in computational biomedicine

Lei Chen, Zhenguo Zhang, Tao Huang, 2017, Artif. Intell. Medicine.

SN-VNE: A Virtual Network Embedding Algorithm for Satellite Networks

Tao Huang, Tianjiao Chen, Jiang Liu, 2019, 2019 IEEE/CIC International Conference on Communications Workshops in China (ICCC Workshops).

DeepDock: Enhancing Ligand-protein Interaction Prediction by a Combination of Ligand and Structure Information

Xiaodi Huang, Tao Huang, Ronghui You, 2019, 2019 IEEE International Conference on Bioinformatics and Biomedicine (BIBM).

Predicting protein subcellular location using learned distributed representations from a protein-protein network

Lei Chen, Tao Huang, Min Liu, 2019, bioRxiv.

Identifying Essential Signature Genes and Expression Rules Associated With Distinctive Development Stages of Early Embryonic Cells

Tao Huang, Tao Zeng, Xiaoyong Pan, 2019, IEEE Access.

Surface Defect Detection using Hierarchical Features

Tao Huang, Jiehan Zhou, Bo Wu, 2019, 2019 IEEE 15th International Conference on Automation Science and Engineering (CASE).

The Influence of Time-delay for the Bifurcation of the Fractional Neuron Network

Tao Huang, Guangfeng Zhang, Min Zheng, 2019, 2019 6th International Conference on Systems and Informatics (ICSAI).

Predicting triplet of transcription factor - mediating enzyme - target gene by functional profiles

Lei Chen, Tao Huang, Yu-Dong Cai, 2011, Neurocomputing.

Screening Dys-Methylation Genes and Rules for Cancer Diagnosis by Using the Pan-Cancer Study

Tao Huang, Tao Zeng, Xiaoyong Pan, 2020, IEEE Access.

Machine Learning and Network Methods for Biology and Medicine

Lin Lu, Lei Chen, Chuan Lu, 2015, Comput. Math. Methods Medicine.

Identification of novel proliferative diabetic retinopathy related genes on protein-protein interaction network

Jian Zhang, Lei Chen, Tao Huang, 2016, Neurocomputing.

Analysis of cancer-related lncRNAs using gene ontology and KEGG pathways

Tao Huang, Lei Chen, Yu-Hang Zhang, 2017, Artif. Intell. Medicine.

WebQMon.ai: Threshold-Oblivious On-Line Web QoE Assessment Using LSTM Neural Networks

Tian Pan, Yunjie Liu, Tao Huang, 2019, IEEE INFOCOM 2019 - IEEE Conference on Computer Communications Workshops (INFOCOM WKSHPS).

Power-Aware Traffic Engineering via Deep Reinforcement Learning

Xiaoyu Peng, Tian Pan, Tao Huang, 2019, IEEE INFOCOM 2019 - IEEE Conference on Computer Communications Workshops (INFOCOM WKSHPS).

Prediction of protein N-formylation and comparison with N-acetylation based on a feature selection method

Xiangyin Kong, Ning Zhang, Tao Huang, 2016, Neurocomputing.

[Exploration on the Construction of Intensive Care Clinical Information Management System].

Tao Huang, Xiaoxia Ren, Ruiying Gan, 2020, Zhongguo yi liao qi xie za zhi = Chinese journal of medical instrumentation.

Collaborative Vehicular Edge Computing Networks: Architecture Design and Research Challenges

Fei Richard Yu, Tao Huang, Xu Liu, 2019, IEEE Access.

Recognizing and Predicting Thioether Bridges Formed by Lanthionine and β-Methyllanthionine in Lantibiotics Using a Random Forest Approach with Feature Selection.

Lei Chen, Tao Huang, Yu-Dong Cai, 2017, Combinatorial chemistry & high throughput screening.

A Dual Decomposition Method for Hierarchical Traffic Control in Inter-DC WANs

Qian Gao, Jiang Liu, Tao Huang, 2019, 2019 IEEE/CIC International Conference on Communications in China (ICCC).

Novel Computational Methods and Tools in Biomedicine and Biopharmacy

Shan Gao, Ning Zhang, Lei Chen, 2014, Comput. Math. Methods Medicine.

Constrained batch-to-batch optimal control for batch process based on kernel principal component regression model

Tao Huang, Jun Zhao, Ganping Li, 2012, 2012 IEEE Fifth International Conference on Advanced Computational Intelligence (ICACI).

An Empirical Case Study on the Temporary File Smell in Dockerfiles

Tao Wang, Zhigang Lu, Tao Huang, 2019, IEEE Access.

Applications of Bioinformatics and Systems Biology in Precision Medicine and Immunooncology

Jialiang Yang, Tao Huang, Yudong Cai, 2018, BioMed research international.

Identification of the Precision Moving Stage Based on Degeneration Input

Zhu Zhang, Tao Huang, Yangqiu Xie, 2019, 2019 Chinese Control Conference (CCC).

Prediction of Nitrated Tyrosine Residues in Protein Sequences by Extreme Learning Machine and Feature Selection Methods.

Lai Wei, Lei Chen, Tao Huang, 2018, Combinatorial chemistry & high throughput screening.

Investigation and Prediction of Human Interactome Based on Quantitative Features

Kaiyan Feng, Tao Huang, Lei Chen, 2020, Frontiers in Bioengineering and Biotechnology.

Service-Aware Optimal Caching Placement for Named Data Networking

F. Richard Yu, Ran Zhang, Jiang Liu, 2019, 2019 IEEE Global Communications Conference (GLOBECOM).

Decoupling Control of Multi-dimensional Piezodriven Stages Based on Sandwich Model

Zhu Zhang, Tao Huang, Yangqiu Xie, 2019, 2019 Chinese Automation Congress (CAC).

Functional association between influenza A (H1N1) virus and human.

Fang Liu, Tao Huang, Yudong Cai, 2009, Biochemical and biophysical research communications.

Signal Propagation in Protein Interaction Network during Colorectal Cancer Progression

Kuo-Chen Chou, Lei Chen, Tao Huang, 2013, BioMed research international.

Prediction of human genes' regulatory functions based on proteinprotein interaction network.

Lei Chen, Tao Huang, Peng Gao, 2012, Protein and peptide letters.

Classification of cancers based on copy number variation landscapes.

Meng Wang, Tao Huang, Ning Zhang, 2016, Biochimica et biophysica acta.

Discriminating between deleterious and neutral non-frameshifting indels based on protein interaction networks and hybrid properties

Ning Zhang, Tao Huang, Yu-Dong Cai, 2014, Molecular Genetics and Genomics.

Analysis of Protein Pathway Networks Using Hybrid Properties

Kuo-Chen Chou, Lei Chen, Tao Huang, 2010, Molecules.

A Shortest-Path-Based Method for the Analysis and Prediction of Fruit-Related Genes in Arabidopsis thaliana

Lei Chen, Tao Huang, Yu-Dong Cai, 2016, PloS one.

Discriminating between Lysine Sumoylation and Lysine Acetylation Using mRMR Feature Selection and Analysis

Lei Chen, Tao Huang, Yu-Dong Cai, 2014, PloS one.

Predicting Biological Functions of Compounds Based on Chemical-Chemical Interactions

Kuo-Chen Chou, Tao Huang, Yu-Dong Cai, 2011, PloS one.

Identification of Lung-Cancer-Related Genes with the Shortest Path Approach in a Protein-Protein Interaction Network

Lei Chen, Tao Huang, Yu-Dong Cai, 2013, BioMed research international.

Identification of the copy number variant biomarkers for breast cancer subtypes

Xiaoyong Pan, Lei Chen, Tao Huang, 2018, Molecular Genetics and Genomics.

Prediction of Metabolic Pathway Using Graph Property, Chemical Functional Group and Chemical Structural Set

Lei Chen, Tao Huang, Yu-Dong Cai, 2013 .

Prediction of Body Fluids where Proteins are Secreted into Based on Protein Interaction Network

Kuo-Chen Chou, Tao Huang, Yu-Dong Cai, 2011, PloS one.

Identification of the Gene Expression Rules That Define the Subtypes in Glioma

Xiaoyong Pan, Lei Chen, Tao Huang, 2018, Journal of clinical medicine.

Prediction of Multi-Type Membrane Proteins in Human by an Integrated Approach

Lei Chen, Tao Huang, Yu-Dong Cai, 2014, PloS one.

An integrated method for the identification of novel genes related to oral cancer

Lei Chen, Tao Huang, Yu-Dong Cai, 2017, PloS one.

Identification of compound–protein interactions through the analysis of gene ontology, KEGG enrichment for proteins and molecular fragments of compounds

Tao Huang, Yu-Dong Cai, Yu-Hang Zhang, 2016, Molecular Genetics and Genomics.

Analysis and Prediction of Translation Rate Based on Sequence and Functional Features of the mRNA

Tao Huang, Yu-Dong Cai, Kai-Yan Feng, 2011, PloS one.

Using GeneReg to construct time delay gene regulatory networks

Lei Liu, Tao Huang, Ziliang Qian, 2010, BMC Research Notes.

Computationally identifying virulence factors based on KEGG pathways.

Lei Chen, Tao Huang, Lulu Zheng, 2013, Molecular bioSystems.

The prediction of interferon treatment effects based on time series microarray gene expression profiles

Yu Shyr, Tao Huang, Lu Xie, 2008, Journal of Translational Medicine.

Inferring Novel Tumor Suppressor Genes with a Protein-Protein Interaction Network and Network Diffusion Algorithms

Lei Chen, Tao Huang, Yu-Dong Cai, 2018, Molecular therapy. Methods & clinical development.

A Computational Method for Classifying Different Human Tissues with Quantitatively Tissue-Specific Expressed Genes

Lei Chen, Tao Huang, Yu-Dong Cai, 2018, Genes.

Classification and Analysis of Regulatory Pathways Using Graph Property, Biochemical and Physicochemical Property, and Functional Property

Kuo-Chen Chou, Lei Chen, Tao Huang, 2011, PloS one.

Identifying Methylation Pattern and Genes Associated with Breast Cancer Subtypes

Xiaoyong Pan, Lei Chen, Tao Huang, 2019, International journal of molecular sciences.

Cross talk of chromosome instability, CpG island methylator phenotype and mismatch repair in colorectal cancer

Tao Huang, Tao Huang, Tian-Ming Zhang, 2018, Oncology letters.

Identification of gene expression signatures across different types of neural stem cells with the Monte‐Carlo feature selection method

Lei Chen, Tao Huang, Yu-Dong Cai, 2018, Journal of cellular biochemistry.

Analysis of Gene Expression Profiles in the Human Brain Stem, Cerebellum and Cerebral Cortex

Chen Chu, Changming Zhu, Lei Chen, 2016, PloS one.

Prediction and Analysis of Retinoblastoma Related Genes through Gene Ontology and KEGG

Lei Chen, Tao Huang, Bi-Qing Li, 2013, BioMed research international.

Frontiers in Protein and Peptide Sciences

Wei Chen, Hui Ding, Kuo-Chen Chou, 2014 .

HIV infection alters the human epigenetic landscape

Xiaoyong Pan, Lei Chen, Tao Huang, 2018, Gene Therapy.

A sequence-based approach for predicting protein disordered regions.

Kuo-Chen Chou, Tao Huang, Yu-Dong Cai, 2013, Protein and peptide letters.

Tissue differences revealed by gene expression profiles of various cell lines

Xiaoyong Pan, Lei Chen, Tao Huang, 2018, Journal of cellular biochemistry.

Gene Ontology and KEGG Pathway Enrichment Analysis of a Drug Target-Based Classification System

Chen Chu, Lei Chen, Tao Huang, 2015, PloS one.

A method to distinguish between lysine acetylation and lysine ubiquitination with feature selection and analysis

Tao Huang, Yu-Dong Cai, Ning Zhang, 2015, Journal of biomolecular structure & dynamics.

The Integrative Network of Gene Expression, MicroRNA, Methylation and Copy Number Variation in Colon and Rectal Cancer

Tao Huang, Yu-Dong Cai, Bi-Qing Li, 2016 .

Identification of Drug-Drug Interactions Using Chemical Interactions

Lei Chen, Tao Huang, Chen Chu, 2017 .

Genetic differences among ethnic groups

Tao Huang, Yu-Dong Cai, Yu-Dong Cai, 2015, BMC Genomics.

Identification of leukemia stem cell expression signatures through Monte Carlo feature selection strategy and support vector machine

Lei Chen, Tao Huang, Yu-Dong Cai, 2019, Cancer Gene Therapy.

Identification of hepatocellular carcinoma related genes with k-th shortest paths in a protein-protein interaction network.

Lei Chen, Tao Huang, Yu-Dong Cai, 2013, Molecular bioSystems.

The Reconstruction and Analysis of Gene Regulatory Networks.

Tao Huang, Guangyong Zheng, Tao Huang, 2018, Methods in molecular biology.

Identification of new candidate drugs for lung cancer using chemical–chemical interactions, chemical–protein interactions and a K-means clustering algorithm

Lei Chen, Tao Huang, Yu-Dong Cai, 2016, Journal of biomolecular structure & dynamics.

Predicting and analyzing early wake-up associated gene expressions by integrating GWAS and eQTL studies.

Tao Huang, Tao Huang, Jiarui Li, 2017, Biochimica et biophysica acta. Molecular basis of disease.

Gene expression differences among different MSI statuses in colorectal cancer

Xiaoyong Pan, Lei Chen, Tao Huang, 2018, International journal of cancer.

Identification of Influenza A/H7N9 Virus Infection-Related Human Genes Based on Shortest Paths in a Virus-Human Protein Interaction Network

Tao Huang, Yu-Dong Cai, Ning Zhang, 2014, BioMed research international.

Classifying Ten Types of Major Cancers Based on Reverse Phase Protein Array Profiles

Lei Chen, Tao Huang, Yu-Dong Cai, 2015, PloS one.

Identifying Chemicals with Potential Therapy of HIV Based on Protein-Protein and Protein-Chemical Interaction Network

Bing Niu, Lei Chen, Tao Huang, 2013, PloS one.

Predicting Metabolic Pathways of Small Molecules and Enzymes Based on Interaction Information of Chemicals and Proteins

Lei Chen, Tao Huang, Yu-Dong Cai, 2012, PloS one.

Prediction of protein amidation sites by feature selection and analysis

Ning Zhang, Tao Huang, Lulu Zheng, 2013, Molecular Genetics and Genomics.

Identification and analysis of the cleavage site in a signal peptide using SMOTE, dagging, and feature selection methods.

Tao Huang, Yu-Dong Cai, Deling Wang, 2018, Molecular omics.

Discriminating cirRNAs from other lncRNAs using a hierarchical extreme learning machine (H-ELM) algorithm with feature selection

Xiaoyong Pan, Lei Chen, Tao Huang, 2017, Molecular Genetics and Genomics.

Identification of retinoblastoma related genes with shortest path in a protein-protein interaction network.

Lei Zhang, Tao Huang, Yu-Dong Cai, 2012, Biochimie.

Genetic Modulation of RNA Splicing with a CRISPR-Guided Cytidine Deaminase.

Jia Li, Tao Huang, Xiaofang Sun, 2018, Molecular cell.

The Use of Chemical-Chemical Interaction and Chemical Structure to Identify New Candidate Chemicals Related to Lung Cancer

Lei Chen, Tao Huang, Yu-Dong Cai, 2015, PloS one.

Hepatitis C Virus Network Based Classification of Hepatocellular Cirrhosis and Carcinoma

Kuo-Chen Chou, Hanry Yu, Tao Huang, 2012, PloS one.

A Unified 35-Gene Signature for both Subtype Classification and Survival Prediction in Diffuse Large B-Cell Lymphomas

Tao Huang, Yu-Dong Cai, Lu Xie, 2010, PloS one.

Analysis of the preferences for splice codes across tissues

Meng Wang, Tao Huang, Yu-Dong Cai, 2015, Protein & Cell.

Identification of Cell Cycle-Regulated Genes by Convolutional Neural Network.

Tao Huang, Chenglin Liu, Peng Cui, 2017, Combinatorial chemistry & high throughput screening.

New computational tool based on machine-learning algorithms for the identification of rhinovirus infection-related genes.

Xiaoyong Pan, Tao Huang, Yu-Dong Cai, 2019, Combinatorial chemistry & high throughput screening.

Prediction of tyrosine sulfation with mRMR feature selection and analysis.

Tao Huang, Shen Niu, Yudong Cai, 2010, Journal of proteome research.

A Novel Method of Predicting Protein Disordered Regions Based on Sequence Features

Tao Huang, Yu-Dong Cai, Ning Zhang, 2013, BioMed research international.

Tao Huang, Yu-Dong Cai, Yu-Hang Zhang, 2017, BioMed research international.

Predicting Transcriptional Activity of Multiple Site p53 Mutants Based on Hybrid Properties

Kuo-Chen Chou, Tao Huang, Yu-Dong Cai, 2011, PloS one.

Prediction of lysine ubiquitination with mRMR feature selection and analysis

Tao Huang, Lu Xie, Yudong Cai, 2011, Amino Acids.

Identification of Differentially Expressed Genes between Original Breast Cancer and Xenograft Using Machine Learning Algorithms

Lei Chen, Tao Huang, Yu-Dong Cai, 2018, Genes.

A computational method for the identification of new candidate carcinogenic and non-carcinogenic chemicals.

Chen Chu, Lei Chen, Tao Huang, 2015, Molecular bioSystems.

An Information-Theoretic Machine Learning Approach to Expression QTL Analysis

Tao Huang, Yu-Dong Cai, Yu-Dong Cai, 2013, PloS one.

Computational Analysis of HIV-1 Resistance Based on Gene Expression Profiles and the Virus-Host Interaction Network

Lei Chen, Tao Huang, Yu-Dong Cai, 2011, PloS one.

Identification of the core regulators of the HLA I-peptide binding process

Tao Huang, Yu-Dong Cai, Xiangyin Kong, 2017, Scientific Reports.

Predicting Functions of Proteins in Mouse Based on Weighted Protein-Protein Interaction Network and Protein Hybrid Properties

Kuo-Chen Chou, Tao Huang, Yu-Dong Cai, 2011, PloS one.

Analysis of Tumor Suppressor Genes Based on Gene Ontology and the KEGG Pathway

Lei Chen, Tao Huang, Yu-Dong Cai, 2014, PloS one.

Primary Tumor Site Specificity is Preserved in Patient-Derived Tumor Xenograft Models

Xiaohua Hu, Xiaoyong Pan, Lei Chen, 2019, Front. Genet..

Using WPNNA classifier in ubiquitination site prediction based on hybrid features.

Tao Huang, Kai-Yan Feng, Xiao-Jun Liu, 2013, Protein and peptide letters.

A network-based method using a random walk with restart algorithm and screening tests to identify novel genes associated with Menière's disease

Tao Huang, Yanshu Wang, Xiangyin Kong, 2017, PloS one.

Accelerating precision medicine through genetic and genomic big data analysis.

Tao Huang, Yudong Cai, 2018, Biochimica et biophysica acta. Molecular basis of disease.

The Occurrence of Genetic Alterations during the Progression of Breast Carcinoma

Tao Huang, Chenglin Liu, Tao Huang, 2016, BioMed research international.

Tissue Expression Difference between mRNAs and lncRNAs

Xiaoyong Pan, Lei Chen, Tao Huang, 2018, International journal of molecular sciences.

Prediction of Pharmacological and Xenobiotic Responses to Drugs Based on Time Course Gene Expression Profiles

Tao Huang, Yu-Dong Cai, Yu-Dong Cai, 2009, PloS one.

Gene expression profiling gut microbiota in different races of humans

Lei Chen, Tao Huang, Yu-Hang Zhang, 2016, Scientific Reports.

Predicting Drugs Side Effects Based on Chemical-Chemical Interactions and Protein-Chemical Interactions

Kuo-Chen Chou, Lei Chen, Tao Huang, 2013, BioMed research international.

Identifying and analyzing different cancer subtypes using RNA-seq data of blood platelets

Lei Chen, Tao Huang, Xiangyin Kong, 2017, Oncotarget.

Predicting Protein Phenotypes Based on Protein-Protein Interaction Network

Tao Huang, Yu-Dong Cai, Yu-Dong Cai, 2011, PloS one.

Predicting protein oxidation sites with feature selection and analysis approach

Kuo-Chen Chou, Tao Huang, Kai-Yan Feng, 2012, Journal of biomolecular structure & dynamics.

Application of the Shortest Path Algorithm for the Discovery of Breast Cancer-Related Genes

Lei Chen, Tao Huang, Guohua Huang, 2016 .

Deciphering the effects of gene deletion on yeast longevity using network and machine learning approaches.

Kuo-Chen Chou, Lei Zhang, Lei Chen, 2012, Biochimie.

Prediction and analysis of cell-penetrating peptides using pseudo-amino acid composition and random forest models

Chen Chu, Lei Chen, Tao Huang, 2015, Amino Acids.