Shinji Nakaoka

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Data-Driven Mathematical Modeling of Microbial Community Dynamics

Shinji Nakaoka, S. Nakaoka, 2018 .

Computation harvesting in road traffic dynamics pdf

Hiroyasu Ando, Shinji Nakaoka, T. Okamoto, 2020, ArXiv.

Energy landscape analysis of ecological communities elucidates the phase space of community assembly dynamics

Kenta Suzuki, Hiroshi Masuya, Shinji Nakaoka, 2019 .

Balance Line in a Lotka-Volterra competition system (Theory of Bio-Mathematics and It's Applications)

Shinji Nakaoka, Yasuhiro Takeuchi, Y. Takeuchi, 2005 .

Effect of shapes of activation functions on predictability in the echo state network pdf

Hiroyasu Ando, Shinji Nakaoka, Hanten Chang, 2019, ArXiv.

Cost-effective length and timing of school closure during an influenza pandemic depend on the severity

Seiya Imoto, Rui Yamaguchi, Shinji Nakaoka, 2013, Theoretical Biology and Medical Modelling.

When do patients develop AIDS? (Theory of Biomathematics and its Applications IV)

Yasuhiro Takeuchi, Shinji Nakaoka, Shingo Iwami, 2008 .

Stability Analysis for a physiological clock model with delayed negative feedback loop (Mathematical models and dynamics of functional equations)

Shinji Nakaoka, 2004 .

A PDE multiscale model of hepatitis C virus infection can be transformed to a system of ODEs.

Shinji Nakaoka, Shingo Iwami, Yusuke Asai, 2018, Journal of theoretical biology.

An information and statistical analysis pipeline for microbial metagenomic sequencing data

Shinji Nakaoka, Keisuke H. Ota, 2020 .

Multiscale mathematical modeling and simulation of cellular dynamical process.

Shinji Nakaoka, S. Nakaoka, 2014, Methods in molecular biology.

Mathematical studies on resource competition and delayed feedback mechanism in biological systems

Shinji Nakaoka, 2007 .

Demographic modeling of transient amplifying cell population growth.

Shinji Nakaoka, Hisashi Inaba, H. Inaba, 2013, Mathematical biosciences and engineering : MBE.

Chronic Inflammation in the Epidermis: A Mathematical Model

Shinji Nakaoka, Yasuhiro Takeuchi, Chang Hyeong Lee, 2016 .

Information and Statistical Analysis Pipeline for High-Throughput RNA Sequencing Data.

Shinji Nakaoka, Keita Matsuyama, S. Nakaoka, 2019, Methods in molecular biology.

Special section on computation with nonlinear dynamics

Shinji Nakaoka, Hiroyasu Ando, 2021 .

Shinji Nakaoka, Daiki Kumakura, S. Nakaoka, 2021, Springer Proceedings in Mathematics & Statistics.

A geographical spread of vaccine-resistance in avian influenza epidemics.

Xianning Liu, Shinji Nakaoka, Shingo Iwami, 2009, Journal of theoretical biology.

A method to determine the duration of the eclipse phase for in vitro infection with a highly pathogenic SHIV strain

Kazuyuki Aihara, Shinji Nakaoka, Shingo Iwami, 2015, Scientific Reports.

Invest conflicts of adult predators.

Shinji Nakaoka, Yasuhiro Takeuchi, Wendi Wang, 2008, Journal of theoretical biology.

Competition in chemostat-type equations with two habitats.

Shinji Nakaoka, Yasuhiro Takeuchi, Y. Takeuchi, 2006, Mathematical biosciences.

Complementary cooperation between two syntrophic bacteria in pesticide degradation.

Shinji Nakaoka, Yasuhiro Takeuchi, Y. Takeuchi, 2009, Journal of theoretical biology.

New algorithm for constructing area-based index with geographical heterogeneities and variable selection: An application to gastric cancer screening

Shinji Nakaoka, Daisuke Yoneoka, D. Yoneoka, 2016, Scientific Reports.

UvA-DARE ( Digital Academic Repository ) Daphnia revisited : local stability and bifurcation theory for physiologically structured population models explained by way of an example

Odo Diekmann, Mats Gyllenberg, Shinji Nakaoka, 2010 .

Cell-to-cell infection by HIV contributes over half of virus infection

Kazuyuki Aihara, Shinji Nakaoka, Shingo Iwami, 2015, eLife.

Prey-predator system with parental care for predators.

Shinji Nakaoka, Yasuhiro Takeuchi, Wendi Wang, 2006, Journal of theoretical biology.