Phuc T. Pham

发表

Simultaneous prediction of transcription factor binding sites in a group of prokaryotic genomes

Shan Li, Shaoqiang Zhang, Zhengchang Su, 2010, BMC Bioinformatics.

MotifClick: prediction of cis-regulatory binding sites via merging cliques

Shan Li, Shaoqiang Zhang, Meng Niu, 2011, BMC Bioinformatics.

Next-generation sequencing of HIV-1 single genome amplicons

Phuc T. Pham, Jerome H. Kim, S. Peel, 2019, Biomolecular detection and quantification.

Rare HIV-1 transmitted/founder lineages identified by deep viral sequencing contribute to rapid shifts in dominant quasispecies during acute and early infection

Phuc T. Pham, Jerome H. Kim, B. Korber, 2017, PLoS pathogens.

Dynamics of Human Immunodeficiency Virus-1 Genetic Diversification During Acute Infection

Phuc T. Pham, J. Ananworanich, E. Sanders-Buell, 2020, Open Forum Infectious Diseases.

Deep Sequencing Reveals Central Nervous System Compartmentalization in Multiple Transmitted/Founder Virus Acute HIV-1 Infection

Phuc T. Pham, Jerome H. Kim, J. Ananworanich, 2019, Cells.

Transmission dynamics among participants initiating antiretroviral therapy upon diagnosis of early acute HIV-1 infection in Thailand

Phuc T. Pham, Jerome H. Kim, J. Ananworanich, 2018, AIDS (London).

Nautilus: a bioinformatics package for the analysis of HIV type 1 targeted deep sequencing data.

Phuc T. Pham, Jerome H. Kim, E. Sanders-Buell, 2013, AIDS research and human retroviruses.

Molecular dating and viral load growth rates suggested that the eclipse phase lasted about a week in HIV-1 infected adults in East Africa and Thailand

J. P. Labuschagne, Phuc T. Pham, Bethany L. Dearlove, 2020, PLoS pathogens.

Significant contribution of subtype G to HIV-1 genetic complexity in Nigeria identified by a newly developed subtyping assay specific for subtype G and CRF02_AG

Phuc T. Pham, Jerome H. Kim, S. Peel, 2016, Medicine.

Factors influencing estimates of HIV-1 infection timing using BEAST

Lydia Bonar, Morgane Rolland, Merlin L. Robb, 2021, PLoS Comput. Biol..

Molecular epidemiology of a primarily MSM acute HIV‐1 cohort in Bangkok, Thailand and connections within networks of transmission in Asia

Phuc T. Pham, Jerome H. Kim, J. Ananworanich, 2018, Journal of the International AIDS Society.

Targeted deep sequencing of HIV-1 using the IonTorrentPGM platform.

Phuc T. Pham, Jerome H. Kim, E. Sanders-Buell, 2014, Journal of virological methods.

Study on Extracting Crude Phycocyanin from Spirulina Algae and Determining Its Ability in Protecting Fibroblasts from Oxidative Stress of Hydroxyl Peroxide

Phuc T. Pham, L. T. Le, M. Ho, 2020, IFMBE Proceedings.

Centralized HIV Program Oversight: An Investigation of a Case Series of New HIV Infections among US Army Soldiers, 2012 to 2013

Phuc T. Pham, Jerome H. Kim, S. Peel, 2015, Medicine.

Cryptic Multiple HIV-1 Infection Revealed by Early, Frequent, and Deep Sampling during Acute Infection

Phuc T. Pham, Jerome H. Kim, B. Korber, 2014 .

Targeted deep sequencing of HIV-1 using the IonTorrentPGM platform.

Phuc T. Pham, Jerome H. Kim, E. Sanders-Buell, 2014, Journal of virological methods.