Matthew The

发表

Response to "Comparison and Evaluation of Clustering Algorithms for Tandem Mass Spectra".

Johannes Griss, Yasset Perez-Riverol, Juan Antonio Vizcaíno, 2018, Journal of proteome research.

Statistical and machine learning methods to analyze large-scale mass spectrometry data

Matthew The, M. The, Matthew The, 2018 .

Focus on the spectra that matter by clustering of quantification data in shotgun proteomics

Matthew The, Lukas Käll, 2020, Nature Communications.

Uncertainty estimation of predictions of peptides' chromatographic retention times in shotgun proteomics

Matthew The, Lukas Käll, Heydar Maboudi Afkham, 2016, Bioinform..

A protein standard that emulates homology for the characterization of protein inference algorithms

Samuel H Payne, Yasset Perez-Riverol, Magnus Palmblad, 2017, bioRxiv.

ABRF Proteome Informatics Research Group (iPRG) 2016 Study: Inferring Proteoforms from Bottom-up Proteomics Data.

Samuel H Payne, Yasset Perez-Riverol, Magnus Palmblad, 2018, Journal of biomolecular techniques : JBT.

MaRaCluster: A Fragment Rarity Metric for Clustering Fragment Spectra in Shotgun Proteomics.

Matthew The, Lukas Käll, L. Käll, 2016, Journal of proteome research.

How to talk about protein‐level false discovery rates in shotgun proteomics

Matthew The, Lukas Käll, Ayesha Tasnim, 2016, Proteomics.

Speeding up Percolator.

William Stafford Noble, Ce Zhang, Kaan Kara, 2019, Journal of proteome research.

Focus on the spectra that matter by clustering of quantification data in shotgun proteomics

Matthew The, Lukas Käll, L. Käll, 2018, bioRxiv.

Integrated identification and quantification error probabilities for shotgun proteomics

Matthew The, Lukas Käll, 2018 .

A protein standard that emulates homology for the characterization of protein inference algorithms

Yasset Perez-Riverol, Magnus Palmblad, Matthew The, 2017 .

Integrated Identification and Quantification Error Probabilities for Shotgun Proteomics*

Matthew The, Lukas Käll, 2018, Molecular & Cellular Proteomics.

Integrating identification and quantification uncertainty for differential protein abundance analysis with Triqler

Matthew The, Lukas Käll, L. Käll, 2020, bioRxiv.

Fast and Accurate Protein False Discovery Rates on Large-Scale Proteomics Data Sets with Percolator 3.0

William Stafford Noble, Michael J. MacCoss, Matthew The, 2016, Journal of The American Society for Mass Spectrometry.