José P. Pinto

发表

Data Integration Issues in the Reconstruction of the Genome-Scale Metabolic Model of Zymomonas Mobillis

Miguel Rocha, Eugénio C. Ferreira, Isabel Rocha, 2008, IWPACBB.

A collaborative approach for semantic time-based video annotation using gamification

Paula Viana, José P. Pinto, 2017, Human-centric Computing and Information Sciences.

Parallel clustering of single cell transcriptomic data with split‐merge sampling on Dirichlet process mixtures

Xiaohui Xie, José P. Pinto, Tiehang Duan, 2018, Bioinform..

Natural computation meta-heuristics for the in silico optimization of microbial strains

Miguel Rocha, Eugénio C. Ferreira, Jens Nielsen, 2008, BMC Bioinformatics.

Highlighting Metabolic Strategies Using Network Analysis over Strain Optimization Results

Miguel Rocha, Isabel Rocha, José P. Pinto, 2011, PRIB.

Evaluating Simulated Annealing Algorithms in the Optimization of Bacterial Strains

Miguel Rocha, Eugénio C. Ferreira, Paulo Maia, 2007, EPIA Workshops.

A Hands-on Approach on Botnets for Behavior Exploration

José P. Pinto, João Pedro Dias, José Magalhães Cruz, 2017, IoTBDS.

YouTube Timed Metadata Enrichment Using a Collaborative Approach

Paula Viana, José P. Pinto, 2018, MISSI.

Parallelized Inference for Single Cell Transcriptomic Clustering with Split Merge Sampling on DPMM Model

Xiaohui Xie, José P. Pinto, Tiehang Duan, 2018, bioRxiv.

GymApp: A Real Time Physical Activity Trainner on Wearable Devices

Paula Viana, José P. Pinto, Tiago Ferreira, 2018, 2018 11th International Conference on Human System Interaction (HSI).

StemMapper: a curated gene expression database for stem cell lineage analysis

Daniel V. Oliveira, Matthias E. Futschik, José P. Pinto, 2017, Nucleic Acids Res..

Evaluating Evolutionary Algorithms and Differential Evolution for the Online Optimization of Fermentation Processes

Miguel Rocha, Eugénio C. Ferreira, Isabel Rocha, 2007, EvoBIO.

StemCellNet: an interactive platform for network-oriented investigations in stem cell biology

Matthias E. Futschik, José P. Pinto, Rui S. R. Machado, 2014, Nucleic Acids Res..

COMPUTATIONAL TOOLS FOR DATA INTEGRATION AND REGULATORY NETWORK INFERENCE IN SYSTEMS BIOLOGY

Miguel Rocha, Isabel Rocha, José P. Pinto, 2010 .

Growing Smart Cities on an Open-Data-Centric Cyber-Physical Platform

Rosaldo J. F. Rossetti, José P. Pinto, João Pedro Dias, 2018, 2018 IEEE International Smart Cities Conference (ISC2).

StemChecker: a web-based tool to discover and explore stemness signatures in gene sets

Daniel V. Oliveira, Matthias E. Futschik, José P. Pinto, 2015, Nucleic Acids Res..

A software tool for network topology analysis under a metabolic engineering perspective

Miguel Rocha, Isabel Rocha, José P. Pinto, 2010, BCB '10.

Differential Evolution for the Offline and Online Optimization of Fed-Batch Fermentation Processes

Miguel Rocha, Eugénio C. Ferreira, Isabel Rocha, 2008 .

UniHI 7: an enhanced database for retrieval and interactive analysis of human molecular interaction networks

Matthias E. Futschik, Gautam Chaurasia, José P. Pinto, 2013, Nucleic Acids Res..

A Study of the Short and Long-term Regulation of E. coli Metabolic Pathways

Miguel Rocha, Eugénio C. Ferreira, Isabel Rocha, 2011, J. Integr. Bioinform..

OptFlux: an open-source software platform for in silico metabolic engineering

Miguel Rocha, Eugénio C. Ferreira, Jens Nielsen, 2010, BMC Systems Biology.

Using the crowd to boost video annotation processes: a game based approach

Paula Viana, José P. Pinto, 2015, CVMP.

TAG4VD: a game for collaborative video annotation

Paula Viana, José P. Pinto, 2013, ImmersiveMe '13.

Interpreting the Regulatory Interplay in E. coli Metabolic Pathways

Miguel Rocha, Eugénio C. Ferreira, Isabel Rocha, 2011, PACBB.

Optimization of Bacterial Strains with Variable-Sized Evolutionary Algorithms

Miguel Rocha, Eugénio C. Ferreira, Isabel Rocha, 2007, 2007 IEEE Symposium on Computational Intelligence and Bioinformatics and Computational Biology.