Mauricio Reyes

Orcun Goksel, Mauricio Reyes, Philipp Jürgens, 2013, 2013 35th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC).

A new soft-tissue simulation strategy for cranio-maxillofacial surgery using facial muscle template model.

Lutz-Peter Nolte, Stefan Weber, Mauricio Reyes, 2010, Progress in biophysics and molecular biology.

Analyzing magnetic resonance imaging data from glioma patients using deep learning

Klaus H. Maier-Hein, Spyridon Bakas, Bjoern H Menze, 2020, Comput. Medical Imaging Graph..

Enhancing clinical MRI Perfusion maps with data-driven maps of complementary nature for lesion outcome prediction pdf

Victor Alves, Mauricio Reyes, Raphael Meier, 2018, MICCAI.

CRF-Based Brain Tumor Segmentation: Alleviating the Shrinking Bias

Mauricio Reyes, Raphael Meier, Roland Wiest, 2016, BrainLes@MICCAI.

Identifying the Best Machine Learning Algorithms for Brain Tumor Segmentation, Progression Assessment, and Overall Survival Prediction in the BRATS Challenge pdf

et al., Mahbubul Alam, Antonio Albiol, 2018, ArXiv.

Conditional Variability of Statistical Shape Models Based on Surrogate Variables

Gábor Székely, Mauricio Reyes, Christof Seiler, 2009, MICCAI.

Automatic detection of lesion load change in Multiple Sclerosis using convolutional neural networks with segmentation confidence

Richard McKinley, Andrew Chan, Mauricio Reyes, 2019, NeuroImage: Clinical.

pymia: A Python package for data handling and evaluation in deep learning-based medical image analysis

Olivier Scheidegger, Mauricio Reyes, Alain Jungo, 2021, Comput. Methods Programs Biomed..

Fully Automatic Segmentation of Brain Tumor Images Using Support Vector Machine Classification in Combination with Hierarchical Conditional Random Field Regularization

Stefan Bauer, Lutz-Peter Nolte, Mauricio Reyes, 2011, MICCAI.

Advanced Design System for Infantile Cranium Shape Model Growth Prediction

Mauricio Reyes, Philipp Jürgens, Kamal Shahim, 2016, MIAR.

3D Face Reconstruction from Video Using 3D Morphable Model and Silhouette

Edilson de Aguiar, Thiago Oliveira-Santos, Mauricio Reyes, 2014, 2014 27th SIBGRAPI Conference on Graphics, Patterns and Images.

Patient-Specific Semi-supervised Learning for Postoperative Brain Tumor Segmentation

Stefan Bauer, Mauricio Reyes, Raphael Meier, 2014, MICCAI.

Statistical Shape Space Analysis Based on Level Sets

Lutz-Peter Nolte, Miguel Ángel González Ballester, Mauricio Reyes, 2008, MIAR.

Adolescent Brain Cognitive Development Neurocognitive Prediction: First Challenge, ABCD-NP 2019, Held in Conjunction with MICCAI 2019, Shenzhen, China, October 13, 2019, Proceedings

Richard McKinley, Mauricio Reyes, Roland Wiest, 2019, ABCD-NP@MICCAI.

Patient-specific estimation of detailed cochlear shape from clinical CT images

Marco Caversaccio, Hans Martin Kjer, Jens Fagertun, 2017, International Journal of Computer Assisted Radiology and Surgery.

Towards Uncertainty-Assisted Brain Tumor Segmentation and Survival Prediction

Víctor M. Pérez-García, Richard McKinley, Mauricio Reyes, 2017, BrainLes@MICCAI.

Evaluation of a portable image overlay projector for the visualisation of surgical navigation data: phantom studies

Stefan Weber, Kate A. Gavaghan, Thiago Oliveira-Santos, 2012, International Journal of Computer Assisted Radiology and Surgery.

Multiscale Modeling for Image Analysis of Brain Tumor Studies

Stefan Bauer, Mauricio Reyes, Philippe Büchler, 2012, IEEE Transactions on Biomedical Engineering.

Hierarchical Markov Random Fields Applied to Model Soft Tissue Deformations on Graphics Hardware

Lutz-Peter Nolte, Rasmus Reinhold Paulsen, Mauricio Reyes, 2009, Recent Advances in the 3D Physiological Human.

Skull-stripping for Tumor-bearing Brain Images pdf

Stefan Bauer, Lutz-Peter Nolte, Mauricio Reyes, 2012, ArXiv.

Femur specific polyaffine model to regularize the log-domain demons registration

Xavier Pennec, Mauricio Reyes, Lucas E. Ritacco, 2011, Medical Imaging.

Prediction of Cranio-Maxillofacial Surgical Planning Using an Inverse Soft Tissue Modelling Approach

Philippe C. Cattin, Lutz-Peter Nolte, Mauricio Reyes, 2013, MICCAI.

Anatomical variability of organs via principal factor analysis from the construction of an abdominal probabilistic atlas

Ronald M. Summers, Marius George Linguraru, Miguel Ángel González Ballester, 2009, 2009 IEEE International Symposium on Biomedical Imaging: From Nano to Macro.

Assessment of Peri-Articular Implant Fitting Based on Statistical Finite Element Modeling

Nils Reimers, Mauricio Reyes, Serena Bonaretti, 2008 .

Understanding and Interpreting Machine Learning in Medical Image Computing Applications

Victor Alves, Mauricio Reyes, Raphael Meier, 2018, Lecture Notes in Computer Science.

Prediction of Trabecular Bone Anisotropy from Quantitative Computed Tomography Using Supervised Learning and a Novel Morphometric Feature Descriptor

Mauricio Reyes, Vimal Chandran, Philippe Zysset, 2015, MICCAI.

Correction tool for Active Shape Model based lumbar muscle segmentation

Stephen J. Ferguson, Mauricio Reyes, Waldo Valenzuela, 2015, 2015 37th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC).

Parametric regression of 3D medical images through the exploration of non-parametric regression models

Xavier Pennec, Mauricio Reyes, Christof Seiler, 2010, 2010 IEEE International Symposium on Biomedical Imaging: From Nano to Macro.

Brainlesion: Glioma, Multiple Sclerosis, Stroke and Traumatic Brain Injuries

Heinz Handels, Oskar Maier, Stefan Winzeck, 2017, Lecture Notes in Computer Science.

Integrated segmentation of brain tumor images for radiotherapy and neurosurgery

Stefan Bauer, Lutz-Peter Nolte, Mauricio Reyes, 2013, Int. J. Imaging Syst. Technol..

Fast and uncertainty-aware cerebral cortex morphometry estimation using random forest regression

Mauricio Reyes, Christian Rummel, Roland Wiest, 2018, 2018 IEEE 15th International Symposium on Biomedical Imaging (ISBI 2018).

Brainlesion: Glioma, Multiple Sclerosis, Stroke and Traumatic Brain Injuries

Bjoern H. Menze, Heinz Handels, Oskar Maier, 2015, Lecture Notes in Computer Science.

Segmenting the Ischemic Penumbra: A Decision Forest Approach with Automatic Threshold Finding

Levin Häni, Richard McKinley, Mauricio Reyes, 2015, Brainles@MICCAI.

Hierarchical segmentation-assisted multimodal registration for MR brain images

Lutz-Peter Nolte, Mauricio Reyes, Huanxiang Lu, 2013, Comput. Medical Imaging Graph..

Simultaneous Multiscale Polyaffine Registration by Incorporating Deformation Statistics

Xavier Pennec, Mauricio Reyes, Christof Seiler, 2012, MICCAI.

Hierarchical patch generation for multilevel statistical shape analysis by principal factor analysis decomposition

Ronald M. Summers, Marius George Linguraru, Mauricio Reyes, 2010, Medical Imaging.

Automatic Landmark Propagation for Left and Right Symmetry Assessment of Tibia and Femur: A Computational Anatomy Based Approach

Nils Reimers, Mauricio Reyes, Christof Seiler, 2009 .

Diffusion weighted imaging distortion correction using hybrid multimodal image registration

Philippe C. Cattin, Lutz-Peter Nolte, Mauricio Reyes, 2011, 2011 IEEE International Symposium on Biomedical Imaging: From Nano to Macro.

Efficient Active Learning for Image Classification and Segmentation using a Sample Selection and Conditional Generative Adversarial Network pdf

Jean-Philippe Thiran, Dwarikanath Mahapatra, Mauricio Reyes, 2018, MICCAI.

Automatic brain tumor grading from MRI data using convolutional neural networks and quality assessment

Victor Alves, Mauricio Reyes, Raphael Meier, 2018 .

Segmentation of brain tumor images based on atlas-registration combined with a Markov-Random-Field lesion growth model

Stefan Bauer, Lutz-Peter Nolte, Mauricio Reyes, 2011, 2011 IEEE International Symposium on Biomedical Imaging: From Nano to Macro.

Automatic multi-resolution shape modeling of multi-organ structures

Ronald M. Summers, Marius George Linguraru, Juan J. Cerrolaza, 2015, Medical Image Anal..

Statistical model based shape prediction from a combination of direct observations and various surrogates: Application to orthopaedic research

Gábor Székely, Lutz-Peter Nolte, Mauricio Reyes, 2012, Medical Image Anal..

Supervised learning for bone shape and cortical thickness estimation from CT images for finite element analysis

Thomas Gerig, Mauricio Reyes, Vimal Chandran, 2019, Medical Image Anal..

Facial nerve image enhancement from CBCT using supervised learning technique

Kate A. Gavaghan, Stefan Weber, Nicolas Gerber, 2015, 2015 37th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC).

Perturb-and-MPM: Quantifying Segmentation Uncertainty in Dense Multi-Label CRFs pdf

Mauricio Reyes, Raphael Meier, Alain Jungo, 2017, ArXiv.

Clusterization of deformation modes for quantitative evaluation on factor analysis techniques on statistical shape modelling

Marius George Linguraru, Mauricio Reyes, Lutz-P. Nolte, 2008 .

Portable image overlay projection for the visualization of surgical planning and navigation data

Stefan Weber, Thiago Oliveira-Santos, Mauricio Reyes, 2011 .

Automated Intervertebral Disc Detection from Low Resolution, Sparse MRI Images for the Planning of Scan Geometries

Guoyan Zheng, Yasuo Sakurai, Mauricio Reyes, 2010, MLMI.

Finite element model for patient-specific functional simulations of cochlear implants

Marco Caversaccio, Hans Martin Kjer, Rasmus Reinhold Paulsen, 2013 .

PV Farm Operation withIndependent Reactive Power Compensation Regardless of the Active Power Level Generation

José R. Espinoza, Samir Kouro, Luis Moran, 2018, IECON 2018 - 44th Annual Conference of the IEEE Industrial Electronics Society.

Few-shot brain segmentation from weakly labeled data with deep heteroscedastic multi-task networks pdf

Richard McKinley, Mauricio Reyes, Christian Rummel, 2019, ArXiv.

Nabla-net: A Deep Dag-Like Convolutional Architecture for Biomedical Image Segmentation

Tom Gundersen, Richard McKinley, Andrew Chan, 2016, BrainLes@MICCAI.

Patient Specific Simulation for Planning of Cochlear Implantation Surgery

Hans Martin Kjer, Jens Fagertun, Rasmus R. Paulsen, 2014, CLIP@MICCAI.

Highly Accurate Facial Nerve Segmentation Refinement From CBCT/CT Imaging Using a Super-Resolution Classification Approach

Stefan Weber, Nicolas Gerber, Mauricio Reyes, 2018, IEEE Transactions on Biomedical Engineering.

Multi-modal diffeomorphic demons registration based on point-wise mutual information

Philippe C. Cattin, Yasuo Sakurai, Stefan Weber, 2010, 2010 IEEE International Symposium on Biomedical Imaging: From Nano to Macro.

Integrated Spatio-Temporal Segmentation of Longitudinal Brain Tumor Imaging Studies

Stefan Bauer, Lutz-Peter Nolte, Mauricio Reyes, 2013, MCV.

Statismo - A framework for PCA based statistical models

Philippe C. Cattin, Tobias Gass, Thomas Albrecht, 2012, The Insight Journal.

Informative sample generation using class aware generative adversarial networks for classification of chest Xrays

Dwarikanath Mahapatra, Mauricio Reyes, Jean-Philippe Thiran, 2019, Comput. Vis. Image Underst..

Uncertainty-driven Sanity Check: Application to Postoperative Brain Tumor Cavity Segmentation pdf

Mauricio Reyes, Raphael Meier, Alain Jungo, 2018, ArXiv.

Magnetic Resonance Fingerprinting Reconstruction via Spatiotemporal Convolutional Neural Networks pdf

Sairam Geethanath, Olivier Scheidegger, Mauricio Reyes, 2018, MLMIR@MICCAI.

Interpretability vs. Complexity: The Friction in Deep Neural Networks

Mauricio Reyes, João Santos, José P. Amorim, 2020, 2020 International Joint Conference on Neural Networks (IJCNN).

STATISTICAL FINITE ELEMENT ANALYSIS FOR BONE MODELING

Nils Reimers, Mauricio Reyes, Serena Bonaretti, 2008 .

Population-specific evaluation of implant bone fitting using PCA shape space and level sets

Nils Reimers, Lutz-Peter Nolte, Marius George Linguraru, 2009, 2009 IEEE International Symposium on Biomedical Imaging: From Nano to Macro.

High-Throughput Glomeruli Analysis of μ CT Kidney Images Using Tree Priors and Scalable Sparse Computation

Philipp Baumann, Mauricio Reyes, Ruslan Hlushchuk, 2016, MICCAI.

Enhancing interpretability of automatically extracted machine learning features: application to a RBM‐Random Forest system on brain lesion segmentation

Victor Alves, Richard McKinley, Mauricio Reyes, 2018, Medical Image Anal..

Interpretability of anatomical variability analysis of abdominal organs via clusterization of decomposition modes

Ronald M. Summers, Marius George Linguraru, Mauricio Reyes, 2008, 2008 30th Annual International Conference of the IEEE Engineering in Medicine and Biology Society.

Interest points localization for brain image using landmark‐annotated atlas

Lutz-Peter Nolte, Mauricio Reyes, Huanxiang Lu, 2012, Int. J. Imaging Syst. Technol..

Mesh-based vs. Image-based Statistical Model of Appearance of the Human Femur: A Preliminary Comparison Study for the Creation of Finite Element Meshes

Mauricio Reyes, Serena Bonaretti, Christelle Boichon, 2011 .

using statistical shape space analysis based on

Nils Reimers, Mauricio Reyes, Stefan Weber, 2010 .

Surface-Based Brain Morphometry for the Prediction of Fluid Intelligence in the Neurocognitive Prediction Challenge 2019

Richard McKinley, Mauricio Reyes, Roland Wiest, 2019, ABCD-NP@MICCAI.

Brainlesion: Glioma, Multiple Sclerosis, Stroke and Traumatic Brain Injuries

Spyridon Bakas, Theo van Walsum, Mauricio Reyes, 2018, Lecture Notes in Computer Science.

Towards automatic MRI volumetry for treatment selection in acute ischemic stroke patients

Stefan Bauer, Mauricio Reyes, Roland Wiest, 2014, 2014 36th Annual International Conference of the IEEE Engineering in Medicine and Biology Society.

STATISTICAL SHAPE ANALYSIS VIA PRINCIPAL FACTOR ANALYSIS

Nicholas Ayache, Lutz-Peter Nolte, Kostas Marias, 2007, 2007 4th IEEE International Symposium on Biomedical Imaging: From Nano to Macro.

Generalized Multiresolution Hierarchical Shape Models via Automatic Landmark Clusterization

Marius George Linguraru, Juan J. Cerrolaza, Miguel Ángel González Ballester, 2014, MICCAI.

Learning Bloch Simulations for MR Fingerprinting by Invertible Neural Networks

Olivier Scheidegger, Mauricio Reyes, Alain Jungo, 2020, MLMIR@MICCAI.

Common Limitations of Image Processing Metrics: A Picture Story pdf

Ronald M. Summers, Sotirios A. Tsaftaris, Lena Maier-Hein, 2021, ArXiv.

Interpretability-Driven Sample Selection Using Self Supervised Learning for Disease Classification and Segmentation

Ling Shao, Dwarikanath Mahapatra, Mauricio Reyes, 2021, IEEE Transactions on Medical Imaging.

Prediction of Stroke Lesion at 90-Day Follow-Up by Fusing Raw DSC-MRI With Parametric Maps Using Deep Learning

Victor Alves, Mauricio Reyes, Joana Amorim, 2021, IEEE Access.

The predictive value of segmentation metrics on dosimetry in organs at risk of the brain

Peter Manser, Mauricio Reyes, Daniel M. Aebersold, 2021, Medical Image Anal..

Deep Learning-based Type Identification of Volumetric MRI Sequences

Thiago Oliveira-Santos, Mauricio Reyes, Claudine Badue, 2021, 2020 25th International Conference on Pattern Recognition (ICPR).

pymia: A Python package for data handling and evaluation in deep learning-based medical image analysis

Olivier Scheidegger, Mauricio Reyes, Alain Jungo, 2020, Comput. Methods Programs Biomed..

Clinically Oriented Translational Cancer Multilevel Modeling: The ContraCancrum Project

Roland Opfer, Steffen Renisch, Enjie Liu, 2009 .

Analysis of 3D soft tissue changes after 1- and 2-jaw orthognathic surgery in mandibular prognathism patients.

Mauricio Reyes, Yoon-Ji Kim, Lucia H. S. Cevidanes, 2013, Journal of oral and maxillofacial surgery : official journal of the American Association of Oral and Maxillofacial Surgeons.

A hybrid multimodal non-rigid registration of MR images based on diffeomorphic demons

Philippe C. Cattin, Mauricio Reyes, Huanxiang Lu, 2010, 2010 Annual International Conference of the IEEE Engineering in Medicine and Biology.

Pooling-free fully convolutional networks with dense skip connections for semantic segmentation , with application to segmentation of white matter lesions

Richard McKinley, Mauricio Reyes, Alain Jungo, 2017 .

Fully Automated Enhanced Tumor Compartmentalization: Man vs. Machine Reloaded

Mauricio Reyes, Raphael Meier, Roland Wiest, 2016, PloS one.

FISICO: Fast Image SegmentatIon COrrection

Levin Häni, Mauricio Reyes, Roland Wiest, 2016, PloS one.

Segmentation of Peripheral Nerves From Magnetic Resonance Neurography: A Fully-Automatic, Deep Learning-Based Approach

Olivier Scheidegger, Mauricio Reyes, Waldo Valenzuela, 2018, Front. Neurol..

Allograft Selection for Transepiphyseal Tumor Resection Around the Knee Using Three-Dimensional Surface Registration

Lutz-Peter Nolte, Mauricio Reyes, Domingo L. Muscolo, 2011, Annals of Biomedical Engineering.

Comparative Evaluation of Pelvic Allograft Selection Methods

Lutz-Peter Nolte, Mauricio Reyes, Laurent Paul, 2013, Annals of Biomedical Engineering.

Image-based vs. mesh-based statistical appearance models of the human femur: implications for finite element simulations.

Mauricio Reyes, Serena Bonaretti, Christof Seiler, 2014, Medical engineering & physics.

Segmenting the ischemic penumbra: a spatial Random Forest approach with automatic threshold finding

Levin Häni, Richard McKinley, Mauricio Reyes, 2015 .

Brain Morphometry Estimation: From Hours to Seconds Using Deep Learning

Mauricio Reyes, Christian Rummel, Roland Wiest, 2020, Frontiers in Neurology.

Population-Based Design of Mandibular Fixation Plates with Bone Quality and Morphology Considerations

Lutz-Peter Nolte, Tateyuki Iizuka, Mauricio Reyes, 2012, Annals of Biomedical Engineering.

Stroke Lesion Outcome Prediction Based on MRI Imaging Combined With Clinical Information

Victor Alves, Mauricio Reyes, Roland Wiest, 2018, Front. Neurol..

Including the trabecular anisotropy from registered microCT data in homogenized FE model improves the bone's mechanical predictions

Mauricio Reyes, Philippe Büchler, Elham Taghizadeh, 2014 .

Soft-Tissue Simulation for Cranio-Maxillofacial Surgery: Clinical Needs and Technical Aspects

Mauricio Reyes, Philipp Jürgens, Hyungmin Kim, 2011 .

Navigation-guided harvesting of autologous iliac crest graft for mandibular reconstruction.

Hans-Florian Zeilhofer, Mauricio Reyes, Rolf Ewers, 2011, Journal of oral and maxillofacial surgery : official journal of the American Association of Oral and Maxillofacial Surgeons.

Three-dimensional surgical simulation.

Mauricio Reyes, Martin Styner, Timothy Turvey, 2010, American journal of orthodontics and dentofacial orthopedics : official publication of the American Association of Orthodontists, its constituent societies, and the American Board of Orthodontics.

MICCAI 2012 Challenge on Multimodal Brain Tumor Segmentation

Mauricio Reyes, Jan Unkelbach, Andras Jakab, 2012 .

Evidence Based Development of a Novel Lateral Fibula Plate (VariAx Fibula) Using a Real CT Bone Data Based Optimization Process During Device Development

Nils Reimers, Mauricio Reyes, Serena Bonaretti, 2012, The open orthopaedics journal.

Fully automatic GBM segmentation in the TCGA-GBM dataset: Prognosis and correlation with VASARI features

Mauricio Reyes, Raphael Meier, Roland Wiest, 2015, Scientific Reports.

Comparison of actual surgical outcomes and 3-dimensional surgical simulations.

Mauricio Reyes, Martin Styner, Timothy Turvey, 2010, Journal of oral and maxillofacial surgery : official journal of the American Association of Oral and Maxillofacial Surgeons.

A novel registration-based methodology for prediction of trabecular bone fabric from clinical QCT: A comprehensive analysis

Mauricio Reyes, Vimal Chandran, Philippe Zysset, 2017, PloS one.

Fast Correction Method for Abdominal Multi-Organ Segmentation Using 2 D / 3 D Free Form Deformation and Posterior Shape Models

Ronald M. Summers, Marius George Linguraru, Mauricio Reyes, 2015 .

Image registration for triggered and non‐triggered DTI of the human kidney: Reduced variability of diffusion parameter estimation

Mauricio Reyes, Chris Boesch, Maryam Seif, 2015, Journal of Magnetic Resonance Imaging.

Development and Implementation of a Web-Enabled 3 D Consultation Tool for Breast Augmentation Surgery Based on 3 D-Image Reconstruction of 2 D Pictures

Mauricio Reyes, Radu Olariu, Pablo de Heras Ciechomski, 2012 .

Automatic estimation of extent of resection and residual tumor volume of patients with glioblastoma.

Mauricio Reyes, Raphael Meier, Roland Wiest, 2017, Journal of neurosurgery.

A multiscale imaging and modelling dataset of the human inner ear

Marco Caversaccio, Hans Martin Kjer, Mario Ceresa, 2017, Scientific Data.