Guillaume Marçais

发表

Asymptotically optimal minimizers schemes

Carl Kingsford, Guillaume Marçais, Dan F. DeBlasio, 2018, bioRxiv.

Compact Universal k-mer Hitting Sets

Ron Shamir, Carl Kingsford, Guillaume Marçais, 2016, WABI.

Harvestman: a framework for hierarchical feature learning and selection from whole genome sequencing data

Christopher James Langmead, Guillaume Marçais, Carl Kingsford, 2020, bioRxiv.

Title of thesis: GENOME ASSEMBLY TECHNIQUES

James A. Yorke, Carl Kingsford, Guillaume Marçais, 2011 .

An Automated Benchmarking Toolset

Alan Mink, Guillaume Marçais, Michel Courson, 2000, HPCN Europe.

A fast, lock-free approach for efficient parallel counting of occurrences of k-mers

Carl Kingsford, Guillaume Marçais, G. Marçais, 2011, Bioinform..

Parsimonious reconstruction of network evolution

Robert Patro, Carl Kingsford, Emre Sefer, 2011, Algorithms for Molecular Biology.

The MaSuRCA genome assembler

Michael Roberts, Steven Salzberg, James A. Yorke, 2013, Bioinform..

Asymptotically optimal minimizers schemes

Carl Kingsford, Guillaume Marçais, Dan DeBlasio, 2018 .

Decoding the massive genome of loblolly pine using haploid DNA and novel assembly strategies

Le-Shin Wu, Guillaume Marçais, Mark Yandell, 2014, Genome Biology.

Lower density selection schemes via small universal hitting sets with short remaining path length pdf

Guillaume Marçais, Carl Kingsford, Hongyu Zheng, 2020, RECOMB.

Designing small universal k-mer hitting sets for improved analysis of high-throughput sequencing

Ron Shamir, Carl Kingsford, Guillaume Marçais, 2017, PLoS Comput. Biol..

Improved design and analysis of practical minimizers.

Guillaume Marçais, Carl Kingsford, Hongyu Zheng, 2020, Bioinformatics.

Construction of optimal minimizers schemes

Carl Kingsford, Guillaume Marçais, Dan DeBlasio, 2018, RECOMB 2018.

Improved design and analysis of practical minimizers

Guillaume Marçais, Carl Kingsford, Hongyu Zheng, 2020, bioRxiv.

Improving the performance of minimizers and winnowing schemes

Ron Shamir, Carl Kingsford, Guillaume Marçais, 2017, bioRxiv.

Locality-sensitive hashing for the edit distance

Prashant Pandey, Carl Kingsford, Guillaume Marçais, 2019, Bioinform..

Genome Assembly Techniques

Guillaume Marçais, G. Marçais, 2011 .

Practical universal k-mer sets for minimizer schemes

Carl Kingsford, Guillaume Marçais, Dan F. DeBlasio, 2019, bioRxiv.

Practical Universal k-mer Sets for Minimizer Schemes

Guillaume Marçais, Carl Kingsford, Dan DeBlasio, 2019, BCB.

Sketching and Sublinear Data Structures in Genomics

Carl Kingsford, Guillaume Marçais, Rob Patro, 2019, Annual Review of Biomedical Data Science.

Locality-sensitive hashing for the edit distance

Prashant Pandey, Carl Kingsford, Guillaume Marçais, 2019, bioRxiv.

QuorUM: An Error Corrector for Illumina Reads

James A. Yorke, Guillaume Marçais, Aleksey Zimin, 2013, PloS one.

Parsimonious Reconstruction of Network Evolution

Robert Patro, Carl Kingsford, Emre Sefer, 2011, WABI.

MUMmer4: A fast and versatile genome alignment system

Adam M. Phillippy, Steven Salzberg, Guillaume Marçais, 2018, PLoS Comput. Biol..

Harvestman: a framework for hierarchical feature learning and selection from whole genome sequencing data

Carl Kingsford, Guillaume Marçais, Trevor S. Frisby, 2021, BMC Bioinform..

Lower Density Selection Schemes via Small Universal Hitting Sets with Short Remaining Path Length

Carl Kingsford, Guillaume Marçais, Hongyu Zheng, 2021, J. Comput. Biol..

Sequence-specific minimizers via polar sets

Carl Kingsford, Guillaume Marçais, Hongyu Zheng, 2021, Bioinform..

No evidence of an association between mitochondrial DNA variants and osteoarthritis in 7393 cases and 5122 controls

James A. Yorke, Guillaume Marçais, Aleksey V. Zimin, 2012, Annals of the rheumatic diseases.

Hybrid assembly of the large and highly repetitive genome of Aegilops tauschii , a progenitor of bread wheat , with the mega-reads algorithm

Sergey Koren, Guillaume Marçais, Steven L Salzberg, 2016 .

A new rhesus macaque assembly and annotation for next-generation sequencing analyses

Guillaume Marçais, Steven L Salzberg, Betsy Ferguson, 2014, Biology Direct.