Salvador Martínez-Bartolomé

发表

Semi‐automatic tool to describe, store and compare proteomics experiments based on MIAPE compliant reports

Andrew R Jones, J Alberto Medina-Aunon, Juan P Albar, 2010, Proteomics.

Java API for MIAPE Generation

Salvador Martínez-Bartolomé, Emilio Salazar Donate, Miguel Ángel López-García, 2010 .

The mzIdentML Data Standard Version 1.2, Supporting Advances in Proteome Informatics*

Harald Barsnes, Martin Eisenacher, Yasset Perez-Riverol, 2017, Molecular & Cellular Proteomics.

The ProteoRed MIAPE web toolkit: A User-friendly Framework to Connect and Share Proteomics Standards*

J Alberto Medina-Aunon, Juan P Albar, Salvador Martínez-Bartolomé, 2011, Molecular & Cellular Proteomics.

The Minimal Information about a Proteomics Experiment (MIAPE) from the Proteomics Standards Initiative.

Juan P Albar, Salvador Martínez-Bartolomé, Pierre-Alain Binz, 2014, Methods in molecular biology.

Proteomics INTegrator (PINT): An Online Tool To Store, Query, and Visualize Large Proteomics Experiment Results.

John R Yates, Salvador Martínez-Bartolomé, Daniel B McClatchy, 2019, Journal of proteome research.

Properties of Average Score Distributions of SEQUEST

Salvador Martínez-Bartolomé, Jesús Vázquez, Pedro Navarro, 2008, Molecular & Cellular Proteomics.

A standardized framing for reporting protein identifications in mzIdentML 1.2

Martin Eisenacher, Juan Antonio Vizcaíno, Andrew R Jones, 2014, Proteomics.

Guidelines for reporting the use of gel image informatics in proteomics

Johann Joets, Andrew R Jones, Christine Hoogland, 2010, Nature Biotechnology.

Storing, reporting and comparing proteomics experiments using the miape generator tool

José María Carazo, Salvador Martínez-Bartolomé, J. Alberto Medina-Aunon, 2009 .

Impact of the identification strategy on the reproducibility of DDA and DIA results.

John R Yates, Salvador Martínez-Bartolomé, Daniel B McClatchy, 2020, Journal of proteome research.

Multicenter experiment for quality control of peptide-centric LC-MS/MS analysis - A longitudinal performance assessment with nLC coupled to orbitrap MS analyzers.

Juan P Albar, Carla Pasquarello, Alexander Scherl, 2015, Journal of proteomics.

Multi-Site Assessment of ProteoRed Plasma Reference Sample for Benchmarking LC-MS Platform Performance

Salvador Martínez-Bartolomé, Francesc Canals, Eliandre de Oliveira, 2011 .

Guidelines for reporting quantitative mass spectrometry based experiments in proteomics.

Martin Eisenacher, Salvador Martínez-Bartolomé, Pierre-Alain Binz, 2013, Journal of proteomics.

PACOM: A Versatile Tool for Integrating, Filtering, Visualizing, and Comparing Multiple Large Mass Spectrometry Proteomics Data Sets.

John R Yates, Salvador Martínez-Bartolomé, Gorka Prieto, 2018, Journal of proteome research.

Miape web toolkit: a user-friendly work frame to conncect and share proteomics standards in the lab

Salvador Martínez-Bartolomé, Miguel Ángel López-García, J. Alberto Medina-Aunon, 2011 .

and the mzidValidator

Juan Antonio Vizcaíno, Henning Hermjakob, Ritesh Krishna, 2013 .

A toolkit for the mzIdentML standard: the ProteoIDViewer, the mzidLibrary and the mzidValidator

Juan Antonio Vizcaíno, Henning Hermjakob, Ritesh Krishna, 2013 .

A new versatile file translator for Proteomics standards

Salvador Martínez-Bartolomé, J. Alberto Medina-Aunon, Juan Pablo Albar-Ramírez, 2010 .

Tools (Viewer, Library and Validator) that Facilitate Use of the Peptide and Protein Identification Standard Format, Termed mzIdentML

Juan Antonio Vizcaíno, Henning Hermjakob, Ritesh Krishna, 2013, Molecular & Cellular Proteomics.

Statistical model for large-scale peptide identification in databases from tandem mass spectra using SEQUEST.

Salvador Martínez-Bartolomé, Fernando Martín-Maroto, Daniel López-Ferrer, 2004, Analytical chemistry.

ΔF508 CFTR interactome remodeling promotes rescue of Cystic Fibrosis

Salvador Martínez-Bartolomé, John R. Yates, Mathieu Lavallée-Adam, 2015, Nature.

From Raw Data to Biological Discoveries: A Computational Analysis Pipeline for Mass Spectrometry-Based Proteomics

Salvador Martínez-Bartolomé, John R. Yates, Mathieu Lavallée-Adam, 2015, Journal of The American Society for Mass Spectrometry.

Increased proteomic complexity in Drosophila hybrids during development

John R Yates, Salvador Martínez-Bartolomé, Mathieu Lavallée-Adam, 2018, Science Advances.