Lawrence Shapiro

发表

New York-Structural GenomiX Research Consortium (NYSGXRC): A Large Scale Center for the Protein Structure Initiative

Stephen K. Burley, Andrej Sali, Mark R. Chance, 2005, Journal of Structural and Functional Genomics.

Free Energy Perturbation Calculation of Relative Binding Free Energy between Broadly Neutralizing Antibodies and the gp120 Glycoprotein of HIV-1

Tongqing Zhou, Baoshan Zhang, Robert Abel, 2017, Journal of molecular biology.

The lanceolate hair rat phenotype results from a missense mutation in a calcium coordinating site of the desmoglein 4 gene.

Neil Crossley, Lawrence Shapiro, L. Shapiro, 2004, Genomics.

The Diversity of Cadherins and Implications for a Synaptic Adhesive Code in the CNS

David R. Colman, Lawrence Shapiro, L. Shapiro, 1999, Neuron.

Viral variants that initiate and drive maturation of V1V2-directed HIV-1 broadly neutralizing antibodies

Lynn Morris, Chaim A. Schramm, John R Mascola, 2015, Nature Medicine.

Molecular Modification of N-Cadherin in Response to Synaptic Activity

David R. Colman, Lawrence Shapiro, L. Shapiro, 2000, Neuron.

cAb-Rep: A Database of Curated Antibody Repertoires for Exploring Antibody Diversity and Predicting Antibody Prevalence

Peter D. Kwong, Lawrence Shapiro, Zizhang Sheng, 2019, bioRxiv.

Positive-unlabeled convolutional neural networks for particle picking in cryo-electron micrographs

Bonnie Berger, Tristan Bepler, Julia Brasch, 2019, Nature Methods.

Structural basis of cell-cell adhesion by cadherins

Peter D. Kwong, Wayne A. Hendrickson, David R. Colman, 1995, Nature.

Sequence and structural determinants of strand swapping in cadherin domains: do all cadherins bind through the same adhesive interface?

Barry Honig, Lawrence Shapiro, B. Honig, 2008, Journal of molecular biology.

Gene-Specific Substitution Profiles Describe the Types and Frequencies of Amino Acid Changes during Antibody Somatic Hypermutation

Peter D. Kwong, John R. Mascola, James C. Mullikin, 2017, Front. Immunol..

Crystal structure , conformational fixation , and entry-related interactions of mature ligand-free HIV-1 Env

Young Do Kwon, Tongqing Zhou, Baoshan Zhang, 2016 .

Transforming binding affinities from 3D to 2D with application to cadherin clustering

Yinghao Wu, Barry Honig, Lawrence Shapiro, 2011, Nature.

Cadherin-mediated cell-cell adhesion: sticking together as a family.

Fabiana Bahna, Barry Honig, Lawrence Shapiro, 2003, Current opinion in structural biology.

Structural and energetic determinants of adhesive binding specificity in type I cadherins

Julia Brasch, Fabiana Bahna, Barry Honig, 2014, Proceedings of the National Academy of Sciences.

Correction for Briët et al., Violating the Shannon capacity of metric graphs with entanglement

Katherine A. Fitzgerald, Fabiana Bahna, Barry Honig, 2013, Proceedings of the National Academy of Sciences.

Maturation and Diversity of the VRC01-Antibody Lineage over 15 Years of Chronic HIV-1 Infection

Young Do Kwon, Tongqing Zhou, Baoshan Zhang, 2015, Cell.

Disulfide-Dependent Multimeric Assembly of Resistin Family Hormones

Philipp E. Scherer, Lawrence Shapiro, L. Shapiro, 2004, Science.

Antibodyomics: bioinformatics technologies for understanding B‐cell immunity to HIV‐1

Peter D. Kwong, John R. Mascola, Chaim A. Schramm, 2017, Immunological reviews.

Type II Cadherin Ectodomain Structures: Implications for Classical Cadherin Specificity

Fabiana Bahna, Barry Honig, Thomas M. Jessell, 2006, Cell.

γ-Protocadherin structural diversity and functional implications

Seetha Mannepalli, Fabiana Bahna, Tom Maniatis, 2016, eLife.

Enhanced Potency of a Broadly Neutralizing HIV-1 Antibody In Vitro Improves Protection against Lentiviral Infection In Vivo

Young Do Kwon, Mario Roederer, Tongqing Zhou, 2014, Journal of Virology.

Structure-Function Analysis of Cell Adhesion by Neural (N-) Cadherin

Wayne A. Hendrickson, David R. Colman, Lawrence Shapiro, 1998, Neuron.

Crystal structure of YdcE protein from Bacillus subtilis

Fabiana Bahna, Lawrence Shapiro, L. Shapiro, 2003, Proteins.

Structural Basis for Broad and Potent Neutralization of HIV-1 by Antibody VRC01

Tongqing Zhou, Gary J. Nabel, Peter D. Kwong, 2010, Science.

Multidonor analysis reveals structural elements, genetic determinants, and maturation pathway for HIV-1 neutralization by VRC01-class antibodies.

Young Do Kwon, Tongqing Zhou, Baoshan Zhang, 2013, Immunity.

Structural genomics target selection for the New York consortium on membrane protein structure

Marco Punta, Burkhard Rost, John F. Hunt, 2009, Journal of Structural and Functional Genomics.

Routine Single Particle CryoEM Sample and Grid Characterization by Tomography

William J. Rice, Anchi Cheng, Bridget Carragher, 2017 .

Identification of a CD4-Binding-Site Antibody to HIV that Evolved Near-Pan Neutralization Breadth.

Tongqing Zhou, Baoshan Zhang, Sam Darko, 2016, Immunity.

Optimization of protein production in mammalian cells with a coexpressed fluorescent marker.

Wayne A Hendrickson, Lawrence Shapiro, I. Schieren, 2004, Structure.

Delineating Antibody Recognition in Polyclonal Sera from Patterns of HIV-1 Isolate Neutralization

Tongqing Zhou, Lynn Morris, Gwo-Yu Chuang, 2013, Science.

Crystal Structures of the Adenylate Sensor from Fission Yeast AMP-Activated Protein Kinase

Lawrence Shapiro, L. Shapiro, Robert Townley, 2007, Science.

The New York Consortium on Membrane Protein Structure (NYCOMPS): a high-throughput platform for structural genomics of integral membrane proteins

Marco Punta, Ming Zhou, Thomas Szyperski, 2010, Journal of Structural and Functional Genomics.

Structures from Anomalous Diffraction of Native Biological Macromolecules

Julia Brasch, Wayne A. Hendrickson, Lawrence Shapiro, 2012, Science.

Mining the antibodyome for HIV-1–neutralizing antibodies with next-generation sequencing and phylogenetic pairing of heavy/light chains

Baoshan Zhang, Peter D. Kwong, John R. Mascola, 2013, Proceedings of the National Academy of Sciences.

P-cadherin is a p63 target gene with a crucial role in the developing human limb bud and hair follicle

Lawrence Shapiro, Yutaka Shimomura, L. Shapiro, 2008, Development.

A pH-dependent switch mediates conformational masking of SARS-CoV-2 spike

Tongqing Zhou, Baoshan Zhang, Richard A. Friesner, 2020, bioRxiv : the preprint server for biology.

Specificity of cell-cell adhesion by classical cadherins: Critical role for low-affinity dimerization through beta-strand swapping.

Lawrence Shapiro, B. Honig, C. Chen, 2005, Proceedings of the National Academy of Sciences of the United States of America.

SONAR: A High-Throughput Pipeline for Inferring Antibody Ontogenies from Longitudinal Sequencing of B Cell Transcripts

Peter D. Kwong, John R. Mascola, Chaim A. Schramm, 2016, Front. Immunol..

De novo identification of VRC01 class HIV-1–neutralizing antibodies by next-generation sequencing of B-cell transcripts

Tongqing Zhou, Baoshan Zhang, James C Mullikin, 2013, Proceedings of the National Academy of Sciences.

New Member of the V1V2-Directed CAP256-VRC26 Lineage That Shows Increased Breadth and Exceptional Potency

Lynn Morris, Gwo-Yu Chuang, Peter D. Kwong, 2015, Journal of Virology.

Molecular design principles underlying β-strand swapping in the adhesive dimerization of cadherins

Fabiana Bahna, Barry Honig, Lawrence Shapiro, 2011, Nature Structural &Molecular Biology.