Itai Yanai

发表

The GeneCards/spl trade/ family of databases: GeneCards, GeneLoc, GeneNote and GeneAnnot

Doron Lancet, Marilyn Safran, Vered Chalifa-Caspi, 2003, Computational Systems Bioinformatics. CSB2003. Proceedings of the 2003 IEEE Bioinformatics Conference. CSB2003.

The mid-developmental transition and the evolution of animal body plans

Leon Anavy, Itai Yanai, Oleg Simakov, 2016, Nature.

GeneAnnot: Interfacing GeneCards with high-throughput gene expression compendia

Doron Lancet, Marilyn Safran, Vered Chalifa-Caspi, 2003, Briefings Bioinform..

Genome-wide midrange transcription profiles reveal expression level relationships in human tissue specification

Doron Lancet, Eytan Domany, Marilyn Safran, 2005, Bioinform..

The GeneCardsTM Family of Databases: GeneCards, GeneLoc, GeneNote and GeneAnnot

Doron Lancet, Marilyn Safran, Vered Chalifa-Caspi, 2003 .

Getting Started in Gene Expression Microarray Analysis

Donna K. Slonim, Itai Yanai, D. Slonim, 2009, PLoS Comput. Biol..

An introduction to high-throughput sequencing experiments: design and bioinformatics analysis.

Itai Yanai, Rachelly Normand, I. Yanai, 2013, Methods in molecular biology.

Accurate denoising of single-cell RNA-Seq data using unbiased principal component analysis

Itai Yanai, Dalia Barkley, Florian Wagner, 2019, bioRxiv.

Brave New Patents: The Law of DNA Worship

Itai Yanai, 2001 .

Predictome: a database of putative functional links between proteins

Charles DeLisi, Julian Mintseris, Itai Yanai, 2002, Nucleic Acids Res..

ELOPER: elongation of paired-end reads as a pre-processing tool for improved de novo genome assembly

Itai Yanai, David H. Silver, Shay Ben-Elazar, 2013, Bioinform..

Does the data do the talking? Confirmation bias in the interpretation of data visualizations

Itai Yanai, Martin J. Lercher, 2021 .

Computational biologists: moving to the driver's seat

Itai Yanai, I. Yanai, E. Chmielnicki, 2017, Genome Biology.

Identifying functional links between genes using conserved chromosomal proximity.

Charles DeLisi, Itai Yanai, Joseph C Mellor, 2002, Trends in genetics : TIG.

A Distinct Gene Module for Dysfunction Uncoupled from Activation in Tumor-Infiltrating T Cells

Aviv Regev, Itai Yanai, Monika S. Kowalczyk, 2016, Cell.

Core promoter T-blocks correlate with gene expression levels in C. elegans.

Itai Yanai, Tamar Hashimshony, T. Hashimshony, 2011, Genome research.

Rewiring of the Yeast Transcriptional Network Through the Evolution of Motif Usage

Sven Bergmann, Itai Yanai, Judith Berman, 2005, Science.

An avidin‐like domain that does not bind biotin is adopted for oligomerization by the extracellular mosaic protein fibropellin

Zhiping Weng, Itai Yanai, Charles R Cantor, 2005, Protein science : a publication of the Protein Society.

scDual-Seq: mapping the gene regulatory program of Salmonella infection by host and pathogen single-cell RNA-sequencing

Itai Yanai, Tamar Hashimshony, T. Hashimshony, 2017, Genome Biology.

Developmental constraints shape the evolution of the nematode mid-developmental transition

Itai Yanai, I. Yanai, Harel Zalts, 2017, Nature Ecology &Evolution.

Alternative splicing and gene duplication are inversely correlated evolutionary mechanisms

Doron Lancet, Itai Yanai, D. Lancet, 2005, Nature Genetics.

Seeing is believing: new methods for in situ single-cell transcriptomics

Itai Yanai, Tamar Hashimshony, T. Hashimshony, 2014, Genome Biology.

BLIND ordering of large-scale transcriptomic developmental timecourses

Leon Anavy, Itai Yanai, Michal Levin, 2014, Development.

Pairing of competitive and topologically distinct regulatory modules enhances patterned gene expression

Itai Yanai, Donna K Slonim, Shai S Shen-Orr, 2008, Molecular systems biology.

Developmental milestones punctuate gene expression in the Caenorhabditis embryo.

Itai Yanai, Michal Levin, Tamar Hashimshony, 2012, Developmental cell.

Comparison of diverse developmental transcriptomes reveals that coexpression of gene neighbors is not evolutionarily conserved.

Itai Yanai, I. Yanai, C. Hunter, 2009, Genome research.

Peer Bork, Itai Yanai, Shannon K McWeeney, 2006, Trends in genetics : TIG.

Spatiotemporal transcriptomics reveals the evolutionary history of the endoderm germ layer

Itai Yanai, Michal Levin, Tamar Hashimshony, 2014, Nature.

Mapping gene expression in two Xenopus species: evolutionary constraints and developmental flexibility.

Leonid Peshkin, Itai Yanai, Paul Jorgensen, 2011, Developmental cell.

New skin for the old RNA-Seq ceremony: the age of single-cell multi-omics

Itai Yanai, Maayan Baron, 2017, Genome Biology.

Integrating microarray-based spatial transcriptomics and single-cell RNA-seq reveals tissue architecture in pancreatic ductal adenocarcinomas

Itai Yanai, Florian Wagner, Dalia Barkley, 2020, Nature Biotechnology.