Samuel Alizon

发表

Using multiple infection history to infer contact network structure

Christian Selinger, Samuel Alizon, C. Selinger, 2019, bioRxiv.

Epidemic Spread on Weighted Networks

Samuel Alizon, Christel Kamp, Mathieu Moslonka-Lefebvre, 2013, PLoS Comput. Biol..

Modelling the evolution of how vector-borne parasites manipulate the vector's host choice

Samuel Alizon, 2017 .

The Evolutionary Dynamics of a Rapidly Mutating Virus within and between Hosts: The Case of Hepatitis C Virus

Samuel Alizon, Fabio Luciani, F. Luciani, 2009, PLoS Comput. Biol..

PLOS Computational Biology 2016 Reviewer and Editorial Board Thank You

Matthias Bethge, Gunnar Blohm, Kevin Bretonnel Cohen, 2017, PLoS Comput. Biol..

Epithelial stratification shapes infection dynamics

Samuel Alizon, Ingeborg Zehbe, Robert Jackson, 2017, bioRxiv.

Assessing the accuracy of Approximate Bayesian Computation approaches to infer epidemiological parameters from phylogenies

Olivier Gascuel, Samuel Alizon, E Saulnier, 2016, bioRxiv.

Predicting epidemics on weighted networks

Samuel Alizon, Christel Kamp, Mathieu Moslonka-Lefebvre, 2012, 1208.6497.

Simulating trajectories and phylogenies from population dynamics models with TiPS

Olivier Gascuel, Samuel Alizon, Marc Choisy, 2020 .

Évolution de la virulence des parasites : apports des modèles emboîtés. (Parasite virulence evolution : insights from embedded models)

Samuel Alizon, Samuel Alizon, 2006 .

Dynamics and evolution of infectious diseases. (Dynamique et évolution des maladies infectieuses)

Samuel Alizon, 2013 .

Inferring epidemiological parameters from phylogenies using regression-ABC: A comparative study

Olivier Gascuel, Samuel Alizon, Emma Saulnier, 2017, PLoS Comput. Biol..

Within-Host Stochastic Emergence Dynamics of Immune-Escape Mutants

Samuel Alizon, Matthew Hartfield, Samuel Alizon, 2015, PLoS Comput. Biol..

Weighting for sex acts to understand the spread of STI on networks.

Sebastian Bonhoeffer, Samuel Alizon, Mathieu Moslonka-Lefebvre, 2012, Journal of theoretical biology.

Within-host bacterial growth dynamics with both mutation and horizontal gene transfer

Samuel Alizon, Ramses Djidjou-Demasse, Mircea T. Sofonea, 2020, Journal of Mathematical Biology.

Age-structured non-pharmaceutical interventions for optimal control of COVID-19 epidemic

Samuel Alizon, Quentin Richard, Marc Choisy, 2021, PLoS Comput. Biol..

Co-infection and super-infection models in evolutionary epidemiology

Samuel Alizon, Samuel Alizon, 2013, Interface Focus.

Modelling the Course of an HIV Infection: Insights from Ecology and Evolution

Carsten Magnus, Samuel Alizon, Samuel Alizon, 2012, Viruses.

Virulence and Pathogenesis of HIV-1 Infection: An Evolutionary Perspective

Sebastian Bonhoeffer, Samuel Alizon, Christophe Fraser, 2014, Science.

Multiple infections and the evolution of virulence.

Samuel Alizon, Y. Michalakis, J. D. de Roode, 2013, Ecology letters.

Quantifying the epidemic spread of Ebola virus (EBOV) in Sierra Leone using phylodynamics

Samuel Alizon, Carmen Lía Murall, S. Lion, 2014, Virulence.

Linking within- and between-host dynamics in the evolutionary epidemiology of infectious diseases.

Troy Day, Samuel Alizon, Nicole Mideo, 2008, Trends in ecology & evolution.

Clinical applications of pathogen phylogenies.

Samuel Alizon, Carmen Lía Murall, Matthew Hartfield, 2014, Trends in molecular medicine.

Multiple Infections, Immune Dynamics, and the Evolution of Virulence

Samuel Alizon, Samuel Alizon, M. van Baalen, 2008, The American Naturalist.

Within-host and between-host evolutionary rates across the HIV-1 genome

Samuel Alizon, Christophe Fraser, C. Fraser, 2013, Retrovirology.

Introducing the Outbreak Threshold in Epidemiology

Samuel Alizon, Matthew Hartfield, Samuel Alizon, 2013, PLoS pathogens.