Martin Hirst

发表

De novo transcriptome assembly with ABySS

Inanç Birol, Steven J. M. Jones, Shaun D. Jackman, 2009, Bioinform..

JointSNVMix: a probabilistic model for accurate detection of somatic mutations in normal/tumour paired next-generation sequencing data

Sohrab P. Shah, Ali Bashashati, Ryan D. Morin, 2012, Bioinform..

Feature-based classifiers for somatic mutation detection in tumour–normal paired sequencing data

Gholamreza Haffari, Anne Condon, Sohrab P. Shah, 2011, Bioinform..

Genomic analysis of a rare human tumor

Inanç Birol, Obi L. Griffith, Steven J. M. Jones, 2010, BMC Bioinformatics.

deFuse: An Algorithm for Gene Fusion Discovery in Tumor RNA-Seq Data

Süleyman Cenk Sahinalp, Malachi Griffith, Sohrab P. Shah, 2011, PLoS Comput. Biol..

Research and Verification

Martin Hirst, 2018 .

Automated high throughput nucleic acid purification from formalin-fixed paraffin-embedded tissue samples for next generation sequence analysis

Martin Jones, Steven J. M. Jones, Martin Hirst, 2017, PloS one.

SNVMix: predicting single nucleotide variants from next-generation sequencing of tumors

Kevin P. Murphy, Sohrab P. Shah, Ryan D. Morin, 2010, Bioinform..

Encyclopedia of Life Sciences. Print version (26 volumes)

Wf Bynum, Martin Hirst, Pj Delves, 2007 .

High-Resolution Single-Cell DNA Methylation Measurements Reveal Epigenetically Distinct Hematopoietic Stem Cell Subpopulations

Martin Hirst, Kieran O'Neill, Emma Laks, 2018, Stem cell reports.

Robust high-performance nanoliter-volume single-cell multiple displacement amplification on planar substrates

Ali Bashashati, Martin Hirst, Kaston Leung, 2016, Proceedings of the National Academy of Sciences.

Complete genomic landscape of a recurring sporadic parathyroid carcinoma

Steven J. M. Jones, Inanc Birol, Thomas Zeng, 2013, The Journal of pathology.

Spark: A navigational paradigm for genomic data exploration

Ting Wang, Henriette O'Geen, Martin Hirst, 2012, Genome research.

BMC Genomics BioMed Central Methodology article

Steven J. M. Jones, Malachi Griffith, Thomas Zeng, 2006 .

Analysis of Normal Human Mammary Epigenomes Reveals Cell-Specific Active Enhancer States and Associated Transcription Factor Networks.

Steven J. M. Jones, Martin Hirst, Richard A. Moore, 2016, Cell reports.

Intermediate DNA methylation is a conserved signature of genome regulation

Ting Wang, Manolis Kellis, Martin Hirst, 2015, Nature Communications.

DNA barcoding reveals diverse growth kinetics of human breast tumour subclones in serially passaged xenografts

Martin Hirst, Annaick Carles, Michelle Moksa, 2014, Nature Communications.

The Human Epigenome Browser at Washington University

David Haussler, Jingchun Zhu, Ivan Smirnov, 2011, Nature Methods.

Human Illness from Avian Influenza H7N3, British Columbia

Martin Hirst, Mel Krajden, Raymond Tellier, 2004, Emerging infectious diseases.

Epigenetic and transcriptional determinants of the human breast

Malachi Griffith, Michael T. McManus, Martin Hirst, 2015, Nature Communications.

Global analysis of in vivo Foxa2-binding sites in mouse adult liver using massively parallel sequencing

Thomas Zeng, Richard Varhol, Martin Hirst, 2008, Nucleic acids research.

DNA hypomethylation within specific transposable element families associates with tissue-specific enhancer landscape

Keith L. Ligon, Martin Hirst, Marco A. Marra, 2013, Nature Genetics.

Whole-Genome Profiling of Mutagenesis in Caenorhabditis elegans

Steven J. M. Jones, Martin Hirst, Stephane Flibotte, 2010, Genetics.

The shaping and functional consequences of the microRNA landscape in breast cancer

Andrea Sottoriva, Yongjun Zhao, Martin Hirst, 2013, Nature.

In-depth characterization of the microRNA transcriptome in a leukemia progression model.

Malachi Griffith, Thomas Zeng, Ryan D. Morin, 2008, Genome research.

The genetic landscape of high-risk neuroblastoma

Steven J. M. Jones, Adam Kiezun, Shaun D. Jackman, 2013, Nature Genetics.

Locus co-occupancy, nucleosome positioning, and H3K4me1 regulate the functionality of FOXA2-, HNF4A-, and PDX1-bound loci in islets and liver.

Inanc Birol, Yongjun Zhao, Martin Hirst, 2010, Genome research.

Evolution of an adenocarcinoma in response to selection by targeted kinase inhibitors

Steven J. M. Jones, Inanc Birol, Malachi Griffith, 2010, Genome Biology.

A mouse atlas of gene expression: large-scale digital gene-expression profiles from precisely defined developing C57BL/6J mouse tissues and cells.

Sarah Barber, Steven J. M. Jones, Richard Varhol, 2005, Proceedings of the National Academy of Sciences of the United States of America.

The genome sequence of the spontaneously hypertensive rat: Analysis and functional significance.

Inanç Birol, Edwin Cuppen, Paul Flicek, 2010, Genome research.

Concurrent CIC mutations, IDH mutations, and 1p/19q loss distinguish oligodendrogliomas from other cancers

Wei Wu, Steven J. M. Jones, Shaun D. Jackman, 2012, The Journal of pathology.

DNA template strand sequencing of single-cells maps genomic rearrangements at high resolution

Yongjun Zhao, Martin Hirst, Mark Hills, 2012, Nature Methods.

High-resolution profiling and discovery of planarian small RNAs

Martin Hirst, Nikolaus Rajewsky, Marco Marra, 2009, Proceedings of the National Academy of Sciences.

Use of mutation profiles to refine the classification of endometrial carcinomas

Thomas Zeng, Martin Hirst, Kane Tse, 2012, The Journal of pathology.

Human Illness from Avian Influenza H7N3

British Columbia, Martin Hirst, Mel Krajden, 2004 .