Peter R. Baker

发表

Current challenges in software solutions for mass spectrometry-based quantitative proteomics

Bas van Breukelen, Albert J. R. Heck, Pedro R. Cutillas, 2012, Amino Acids.

Three dimensional printing with fine metal powders

Peter R. Baker, P. Baker, 1997 .

Proteomics Standards Initiative Extended FASTA Format (PEFF)

Harald Barsnes, Martin Eisenacher, Yasset Perez-Riverol, 2019, bioRxiv.

Glyco-centric lectin magnetic bead array (LeMBA) − proteomics dataset of human serum samples from healthy, Barrett׳s esophagus and esophageal adenocarcinoma individuals

David Chen, Michelle M. Hill, Robert J. Chalkley, 2016, Data in brief.

Matching Cross-linked Peptide Spectra: Only as Good as the Worse Identification*

Robert J. Chalkley, Peter R. Baker, A. L. Burlingame, 2013, Molecular & Cellular Proteomics.

Mass spectrometric characterization of the affinity-purified human 26S proteasome complex.

Peter R. Baker, Lan Huang, P. Baker, 2007, Biochemistry.

Current challenges in software solutions for mass spectrometry-based quantitative proteomics

Peter R. Baker, Salvatore Cappadona, A. Heck, 2012, Amino Acids.

Modification Site Localization Scoring Integrated into a Search Engine*

Peter R Baker, Jonathan C Trinidad, Robert J Chalkley, 2011, Molecular & Cellular Proteomics.

Protein interaction landscapes revealed by advanced in vivo cross-linking–mass spectrometry

Robyn M. Kaake, Peter R. Baker, Ilan E. Chemmama, 2021, Proceedings of the National Academy of Sciences.

Matching Cross-linked Peptide Spectra: Only as Good as the Worse Identification.

Peter R. Baker, A. Burlingame, P. Baker, 2014, Molecular & cellular proteomics : MCP.

as the worse identification

Peter R. Baker, A. Burlingame, P. Baker, 2013 .

The Identification of Protein-Protein Interactions of the Nuclear Pore Complex of Saccharomyces cerevisiae Using High Throughput Matrix-assisted Laser Desorption Ionization Time-of-Flight Tandem Mass Spectrometry*

Peter R Baker, Katalin F Medzihradszky, Alma L Burlingame, 2002, Molecular & Cellular Proteomics.

SPINDLY mediates O-fucosylation of hundreds of proteins and sugar-dependent growth in Arabidopsis

Peter R. Baker, P. Baker, Shouling Xu, 2023, The Plant cell.

Role of accurate mass measurement (+/- 10 ppm) in protein identification strategies employing MS or MS/MS and database searching.

Peter R. Baker, A. Burlingame, K. Clauser, 1999, Analytical chemistry.

In-depth Analysis of Tandem Mass Spectrometry Data from Disparate Instrument Types*S

Peter R Baker, Robert J Chalkley, Katalin F Medzihradszky, 2008, Molecular & Cellular Proteomics.

Comprehensive Analysis of a Multidimensional Liquid Chromatography Mass Spectrometry Dataset Acquired on a Quadrupole Selecting, Quadrupole Collision Cell, Time-of-flight Mass Spectrometer

Peter R. Baker, A. Burlingame, K. Medzihradszky, 2005, Molecular & Cellular Proteomics.

Comprehensive Analysis of a Multidimensional Liquid Chromatography Mass Spectrometry Dataset Acquired on a Quadrupole Selecting, Quadrupole Collision Cell, Time-of-flight Mass Spectrometer

Lan Huang, Peter R Baker, Robert J Chalkley, 2005, Molecular & Cellular Proteomics.

Use of a glycosylation site database to improve glycopeptide identification from complex mixtures

Peter R Baker, Robert J Chalkley, Peter R. Baker, 2016, Analytical and Bioanalytical Chemistry.

MS-Viewer: A Web-based Spectral Viewer for Proteomics Results*

Peter R Baker, Robert J Chalkley, Peter R. Baker, 2014, Molecular & Cellular Proteomics.

Improving Software Performance for Peptide Electron Transfer Dissociation Data Analysis by Implementation of Charge State- and Sequence-Dependent Scoring*

Peter R Baker, Robert J Chalkley, Katalin F Medzihradszky, 2010, Molecular & Cellular Proteomics.

Quantitative Analysis of Synaptic Phosphorylation and Protein Expression*S

Peter R. Baker, A. Burlingame, C. Specht, 2008, Molecular & Cellular Proteomics.

Finding Chimeras: a Bioinformatics Strategy for Identification of Cross-linked Peptides*

Peter R Baker, Robert J Chalkley, Alma L Burlingame, 2009, Molecular & Cellular Proteomics.

Improved identification of O-linked glycopeptides from ETD data with optimized scoring for different charge states and cleavage specificities

Peter R. Baker, K. Medzihradszky, P. Baker, 2010, Amino Acids.

Mass Spectrometric Analysis, Automated Identification and Complete Annotation of O-Linked Glycopeptides

Robert J Chalkley, Katalin F Medzihradszky, Alma L Burlingame, 2010, European journal of mass spectrometry.

The effectiveness of filtering glycopeptide peak list files for Y ions.

Peter R Baker, Robert J Chalkley, Adam Pap, 2020, Molecular omics.

Proteomics Standards Initiative Extended FASTA Format (PEFF)

Harald Barsnes, Martin Eisenacher, Yasset Perez-Riverol, 2019, bioRxiv.