Yoram Louzoun

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HLA class I haplotype diversity is consistent with selection for frequent existing haplotypes

Idan Alter, Loren Gragert, Stephanie Fingerson, 2017, PLoS Comput. Biol..

A combined network and machine learning approaches for product market forecasting pdf

Shlomo Havlin, Jun Meng, Yoram Louzoun, 2018, ArXiv.

Bacteria Modulate the CD8+ T Cell Epitope Repertoire of Host Cytosol-Exposed Proteins to Manipulate the Host Immune Response

Yoram Louzoun, Yaakov Maman, Ran Nir-Paz, 2011, PLoS Comput. Biol..

Estimating Differential Entropy using Recursive Copula Splitting

Yoram Louzoun, Gil Ariel, 2020, Entropy.

Edge sign prediction based on a combination of network structural topology and sign propagation

Yoram Louzoun, Keren Cohen, Roi Naaman, 2019, J. Complex Networks.

Power Laws for Heavy-Tailed Distributions: Modeling Allele and Haplotype Diversity for the National Marrow Donor Program

Loren Gragert, Martin Maiers, Yoram Louzoun, 2015, PLoS Comput. Biol..

Topology of products similarity network for market forecasting

Jun Meng, Yoram Louzoun, Shlomo Havlin, 2019, Appl. Netw. Sci..

Regional based query in graph active learning pdf

Yoram Louzoun, Roy Abel, Y. Louzoun, 2019, ArXiv.

Evolution through bursts: Network structure develops through localized bursts in time and space

Jacob Goldenberg, Lev Muchnik, Yoram Louzoun, 2016, Network Science.

GRIMM: GRaph IMputation and Matching for HLA Genotypes

Joel Schneider, Loren Gragert, Martin Maiers, 2018, bioRxiv.

Autoencoder based local T cell repertoire density can be used to classify samples and T cell receptors

Yoram Louzoun, Shirit Dvorkin, Reut Levi, 2020, bioRxiv.

Topological based classification using graph convolutional networks pdf

Yoram Louzoun, Roy Abel, Idan Benami, 2019, ArXiv.

MIPMLP – Microbiome Preprocessing Machine Learning Pipeline

Yoram Louzoun, Yoel Y Jasner, Anna Belogolovski, 2020, bioRxiv.

Prediction of Specific TCR-Peptide Binding From Large Dictionaries of TCR-Peptide Pairs

Yoram Louzoun, Ido Springer, Hanan Besser, 2020, Frontiers in Immunology.

Feedback between node and network dynamics can produce real-world network properties

Jacob Goldenberg, Lev Muchnik, Yoram Louzoun, 2012 .

Directed triadic closure and edge deletion mechanism induce asymmetry in directed edge properties

Lev Muchnik, Yoram Louzoun, Hilla Brot, 2015, The European Physical Journal B.

Mid size cliques are more common in real world networks than triangles

Yoram Louzoun, Noa Slater, Royi Itzhack, 2014, Network Science.

Emergence of Intentional Procedures in Self-Organizing Neural Networks

Henri Atlan, Yoram Louzoun, 2010 .

Explicit Gradient Learning pdf

Yoram Louzoun, Sarit Kraus, Noa Agmon, 2020, ArXiv.

Topological based classification of paper domains using graph convolutional networks pdf

Yoram Louzoun, Keren Cohen, Idan Benami, 2019, ArXiv.

What cycles the cell? -Robust autonomous cell cycle models.

Yoram Louzoun, Orit Lavi, Orit Lavi, 2009, Mathematical medicine and biology : a journal of the IMA.

Viruses selectively mutate their CD8+ T-cell epitopes—a large-scale immunomic analysis

Yoram Louzoun, Ran Levi, Lea Tsaban, 2009, Bioinform..

GRIMM: GRaph IMputation and matching for HLA genotypes

Joel Schneider, Loren Gragert, Martin Maiers, 2019, Bioinform..

Antigen Epitope Density Dependent Cell Surface Discrimination and the Role of the Lipid Rafts

Yoram Louzoun, German Nudelman, 2004, METMBS.

Long-term context-dependent genetic adaptation of the viral genetic cloud

Yoram Louzoun, Marco Vignuzzi, Tzipi Braun, 2018, Bioinform..

Yoram Louzoun, Matan Bodaker, Eran Meshorer, 2014, Bioinform..

The emergence of goals in a self-organizing network: A non-mentalist model of intentional actions

Henri Atlan, Yoram Louzoun, H. Atlan, 2007, Neural Networks.

World-Size Global Markets Lead to Economic Instability

Jacob Goldenberg, David Mazursky, Yoram Louzoun, 2003, Artificial Life.

Dynamical and mechanistic reconstructive approaches of T lymphocyte dynamics: using visual modeling languages to bridge the gap between immunologists, theoreticians, and programmers

Hillel Kugler, Yoram Louzoun, Rob J. de Boer, 2013 .

Self-emergence of knowledge trees: extraction of the Wikipedia hierarchies.

Yoram Louzoun, Sorin Solomon, Royi Itzhack, 2007, Physical review. E, Statistical, nonlinear, and soft matter physics.

Bioinformatics Original Paper Copying Nodes versus Editing Links: the Source of the Difference between Genetic Regulatory Networks and the Www

Lev Muchnik, Yoram Louzoun, Sorin Solomon, 2022 .

Mutation parameters from DNA sequence data using graph theoretic measures on lineage trees

Steven H. Kleinstein, Yoram Louzoun, Reuma Magori-Cohen, 2006, ISMB.

Kernel Multi Label Vector Optimization (kMLVO): A Unified Multi-Label Classification Formalism

Yoram Louzoun, Gilad Liberman, Tal Vider-Shalit, 2013, LION.

Random distance dependent attachment as a model for neural network generation in the Caenorhabditis elegans

Yoram Louzoun, Royi Itzhack, Y. Louzoun, 2010, Bioinform..

T 1 Mapping, AIF and Pharmacokinetic Parameter Extraction from Dynamic Contrast Enhancement MRI Data

Olivier Colliot, Yoram Louzoun, Dafna Ben-Bashat, 2011, MBIA.

MHC-I prediction using a combination of T cell epitopes and MHC-I binding peptides.

Yoram Louzoun, Tal Vider-Shalit, Y. Louzoun, 2011, Journal of immunological methods.

Yoram Louzoun, Yonatan Rosen, Y. Louzoun, 2016, J. Complex Networks.

Precise score for the prediction of peptides cleaved by the proteasome

Yoram Louzoun, Ido Ginodi, Lea Tsaban, 2008, Bioinform..

Explicit Gradient Learning for Black-Box Optimization

Yoram Louzoun, Sarit Kraus, Noa Agmon, 2020, ICML.

Unbiased classification of spatial strategies in the Barnes maze

Yoram Louzoun, Tomer Illouz, Ravit Madar, 2016, Bioinform..

Two stage approach to functional network reconstruction for binary time-series

Yoram Louzoun, Pablo Piedrahita, Navit Dori, 2019, The European Physical Journal B.

Planted Dense Subgraphs in Dense Random Graphs Can Be Recovered using Graph-based Machine Learning pdf

Yoram Louzoun, Itay Levinas, 2022, ArXiv.

Quadratic GCN for Graph Classification pdf

Yoram Louzoun, Omer Nagar, Shoval Frydman, 2019, ArXiv.

BFS based distributed algorithm for parallel local directed sub-graph enumeration

Yoram Louzoun, Itay Levinas, Roy Scherz, 2022 .

Exposing individual differences through network topology pdf

Lev Muchnik, Yoram Louzoun, Adam Zaidel, 2021, ArXiv.

The Restricted DH Gene Reading Frame Usage in the Expressed Human Antibody Repertoire Is Selected Based upon its Amino Acid Content

Yoram Louzoun, Jacob Glanville, Lea Tsaban, 2013, The Journal of Immunology.

A Systems Immunology Approach to the Host-Tumor Interaction: Large-Scale Patterns of Natural Autoantibodies Distinguish Healthy and Tumor-Bearing Mice

Yoram Louzoun, Irun R. Cohen, Francisco J. Quintana, 2009, PloS one.

HIV time hierarchy: winning the war while, loosing all the battles

Henri Atlan, Yoram Louzoun, Uri Hershberg, 2000, nlin/0006023.

Circulating lymphocyte subsets in normal adults are variable and can be clustered into subgroups

Yoram Louzoun, E. L. Luning Prak, Y. Louzoun, 2011, Cytometry. Part B, Clinical cytometry.

Dynamical analysis of a degenerate primary and secondary humoral immune response

Gyan Bhanot, Yoram Louzoun, G. Bhanot, 2003, Bulletin of mathematical biology.

The Emergence of Spatial Complexity in the immune System

Henri Atlan, Yoram Louzoun, Sorin Solomon, 2000 .

Volatility driven market in a generalized Lotka–Voltera formalism

Yoram Louzoun, Sorin Solomon, 2001 .

The evolution of mathematical immunology

Yoram Louzoun, Y. Louzoun, 2007, Immunological reviews.

An optimal algorithm for counting network motifs

Yoram Louzoun, Royi Itzhack, Y. Louzoun, 2007 .

Empirical extraction of mechanisms underlying real world network generation

Jacob Goldenberg, Lev Muchnik, Tom Erez, 2010 .

Evidence for Shaping of Light Chain Repertoire by Structural Selection

Yuval Elhanati, Thierry Mora, Aleksandra M. Walczak, 2018, Front. Immunol..

Inevitably reborn: The reawakening of extinct innovations ☆

Jacob Goldenberg, David Mazursky, Yoram Louzoun, 2004 .

Modeling complexity in biology

Henri Atlan, Yoram Louzoun, Sorin Solomon, 2001 .

The mutation patterns in B-cell immunoglobulin receptors reflect the influence of selection acting at multiple time-scales

Steven H. Kleinstein, Yoram Louzoun, Gur Yaari, 2015, Philosophical Transactions of the Royal Society B: Biological Sciences.

A mathematical model for pancreatic cancer growth and treatments.

Avner Friedman, Yoram Louzoun, Chuan Xue, 2014, Journal of theoretical biology.

Multi Step Selection in Ig H Chains is Initially Focused on CDR3 and Then on Other CDR Regions

Yoram Louzoun, Gilad Liberman, Jacob Glanville, 2013, Front. Immunol..

System-wide Analysis of the T Cell Response.

Liran Carmel, Yoram Louzoun, Daniel C. Douek, 2016, Cell reports.

Estimating Hypermutation Rates from Clonal Tree Data 1

Steven H. Kleinstein, Yoram Louzoun, Mark J. Shlomchik, 2003, The Journal of Immunology.

Virus-epitope vaccine design: informatic matching the HLA-I polymorphism to the virus genome.

Yoram Louzoun, Tal Vider-Shalit, Y. Louzoun, 2007, Molecular immunology.

Long loops of information flow in genetic networks highlight an inherent directionality

Yoram Louzoun, Royi Itzhack, Lea Tsaban, 2013 .

Support vector machine-based differentiation between aggressive and chronic periodontitis using microbial profiles.

Magda Feres, Yoram Louzoun, Simi Haber, 2018, International dental journal.

T1 Mapping using variable flip angle SPGR data with flip angle correction

Dafna Ben Bashat, Yoram Louzoun, Gilad Liberman, 2014, Journal of magnetic resonance imaging : JMRI.

Functional connectivity of the prefrontal cortex and the amygdala in posttraumatic stress disorder

Yoram Louzoun, Asaf Gilboa, Hava Lester, 2003, Biological Psychiatry.

Proliferation and competition in discrete biological systems

Henri Atlan, Yoram Louzoun, Sorin Solomon, 2003, Bulletin of mathematical biology.

Resting regional cerebral perfusion in recent posttraumatic stress disorder

Yoram Louzoun, Asaf Gilboa, Nanette Freedman, 2003, Biological Psychiatry.

Adaptive shut-down of EEG activity predicts critical acidemia in the near-term ovine fetus

Yoram Louzoun, Nathan Gold, Martin G. Frasch, 2015, Physiological reports.

T-cell epitope repertoire as predicted from human and viral genomes.

Yoram Louzoun, Y. Louzoun, M. Weigert, 2006, Molecular immunology.

Automatic multi-modal MR tissue classification for the assessment of response to bevacizumab in patients with glioblastoma.

Dafna Ben Bashat, Yoram Louzoun, Gilad Liberman, 2013, European journal of radiology.

Editing Anti-DNA B Cells by Vλx

Yoram Louzoun, Y. Louzoun, M. Weigert, 2004, The Journal of experimental medicine.

Directionality of real world networks as predicted by path length in directed and undirected graphs

Yoram Louzoun, Yonatan Rosen, Y. Louzoun, 2014 .