Yanjun Xu

发表

Identification and comprehensive characterization of lncRNAs with copy number variations and their driving transcriptional perturbed subpathways reveal functional significance for cancer

Feng Li, Haixiu Yang, Jingwen Wang, 2019, Briefings Bioinform..

RNAactDrug: a comprehensive database of RNAs associated with drug sensitivity from multi-omics data

Jing Xiao, Feng Li, Haixiu Yang, 2019, Briefings Bioinform..

ncDRMarker: a computational method for identifying non-coding RNA signatures of drug resistance based on heterogeneous network

Hongbo Shi, Haixiu Yang, Desi Shang, 2020, Annals of translational medicine.

Dissection of miRNA-miRNA Interaction in Esophageal Squamous Cell Carcinoma

Qianlan Yao, Junwei Han, Dawei Xiao, 2013, PloS one.

LncSubpathway: a novel approach for identifying dysfunctional subpathways associated with risk lncRNAs by integrating lncRNA and mRNA expression profiles and pathway topologies

Haixiu Yang, Desi Shang, Tan Wu, 2017, Oncotarget.

Subpathway-GMir: identifying miRNA-mediated metabolic subpathways by integrating condition-specific genes, microRNAs, and pathway topologies

Haixiu Yang, Desi Shang, Zeguo Sun, 2015, Oncotarget.

Subpathway-GM: identification of metabolic subpathways via joint power of interesting genes and metabolites and their topologies within pathways

Qianlan Yao, Haixiu Yang, Desi Shang, 2013, Nucleic acids research.

Characterizing the Network of Drugs and Their Affected Metabolic Subpathways

Yan Wang, Qianlan Yao, Desi Shang, 2012, PloS one.

Prioritizing Candidate Disease Metabolites Based on Global Functional Relationships between Metabolites in the Context of Metabolic Pathways

Qianlan Yao, Haixiu Yang, Desi Shang, 2014, PloS one.

MPINet: Metabolite Pathway Identification via Coupling of Global Metabolite Network Structure and Metabolomic Profile

Qianlan Yao, Haixiu Yang, Desi Shang, 2014, BioMed research international.

Subpathway-LNCE: Identify dysfunctional subpathways competitively regulated by lncRNAs through integrating lncRNA-mRNA expression profile and pathway topologies

Zeguo Sun, Xinrui Shi, Li Feng, 2016, Oncotarget.

Topologically inferring pathway activity toward precise cancer classification via integrating genomic and metabolomic data: prostate cancer as a case

Wei Liu, Jian Zhang, Wei Wang, 2015, Scientific Reports.

Prioritization of rheumatoid arthritis risk subpathways based on global immune subpathway interaction network and random walk strategy.

Wenhua Lv, Ruijie Zhang, Yongshuai Jiang, 2015, Molecular bioSystems.

A global view of network of lncRNAs and their binding proteins.

Qianlan Yao, Haixiu Yang, Desi Shang, 2015, Molecular bioSystems.

Identification of miRNA-Mediated Core Gene Module for Glioma Patient Prediction by Integrating High-Throughput miRNA, mRNA Expression and Pathway Structure

Lei Han, Wei Yan, Qianlan Yao, 2014, PloS one.

Network Analysis Reveals Functional Cross-links between Disease and Inflammation Genes

Yun Xiao, Yanjun Xu, Juan Xu, 2013, Scientific Reports.

Identifying subpathway signatures for individualized anticancer drug response by integrating multi-omics data

Desi Shang, Yanjun Xu, Yingqi Xu, 2019, Journal of Translational Medicine.