Masatoshi Nei

发表

ADAPTSITE: detecting natural selection at single amino acid sites

Takashi Gojobori, Yoshiyuki Suzuki, Masatoshi Nei, 2001, Bioinform..

Perspective My Memory of Walter Fitch (1929-2011) and Starting Molecular Biology and Evolution

Masatoshi Nei, M. Nei, 2014 .

MEGA: Molecular Evolutionary Genetics Analysis software for microcomputers

Sudhir Kumar, Masatoshi Nei, Koichiro Tamura, 1994, Comput. Appl. Biosci..

MEGA: A biologist-centric software for evolutionary analysis of DNA and protein sequences

Joel Dudley, Sudhir Kumar, Masatoshi Nei, 2008, Briefings Bioinform..

MEGA3: Integrated software for Molecular Evolutionary Genetics Analysis and sequence alignment

Sudhir Kumar, Masatoshi Nei, Koichiro Tamura, 2004, Briefings Bioinform..

MEGA2: molecular evolutionary genetics analysis software

Sudhir Kumar, Masatoshi Nei, Koichiro Tamura, 2001, Bioinform..

METREE: a program package for inferring and testing minimum-evolution trees

Andrey Rzhetsky, Masatoshi Nei, M. Nei, 1994, Comput. Appl. Biosci..

POPTREEW: web version of POPTREE for constructing population trees from allele frequency data and computing some other quantities.

Masatoshi Nei, Koichiro Tamura, Naoko Takezaki, 2014, Molecular biology and evolution.

Evolutionary Distance: Estimation

Masatoshi Nei, M. Nei, Jianzhi Zhang, 2006 .

The number of nucleotides required to determine the branching order of three species, with special reference to the human-chimpanzee-gorilla divergence

Masatoshi Nei, Naruya Saitou, N. Saitou, 2005, Journal of Molecular Evolution.

Assessing molecular phylogenies

Masatoshi Nei, Naoko Takezaki, M. Nei, 1995, Science.

Reanalysis of Murphy et al.’s Data Gives Various Mammalian Phylogenies and Suggests Overcredibility of Bayesian Trees

Masatoshi Nei, Kazuharu Misawa, M. Nei, 2003, Journal of Molecular Evolution.

Accuracy of estimated phylogenetic trees from molecular data

Yoshio Tateno, Masatoshi Nei, Fumio Tajima, 1983, Journal of Molecular Evolution.

Selectionism and neutralism in molecular evolution.

Masatoshi Nei, M. Nei, 2005, Molecular biology and evolution.

Overcredibility of molecular phylogenies obtained by Bayesian phylogenetics

Masatoshi Nei, G. Glazko, M. Nei, 2002, Proceedings of the National Academy of Sciences of the United States of America.

Genetic structure of human populations II. Differentiation of blood group gene frequencies among isolated populations1

Masatoshi Nei, M. Nei, Y. Imaizumi, 1966, Heredity.

Reliabilities of identifying positive selection by the branch-site and the site-prediction methods

Masatoshi Nei, M. Nei, Yoshiyuki Suzuki, 2009, Proceedings of the National Academy of Sciences.

Unbiased estimates of the number of nucleotide substitutions when substitution rate varies among different sites

Andrey Rzhetsky, Masatoshi Nei, M. Nei, 1994, Journal of Molecular Evolution.

Statistical properties of the ordinary least-squares, generalized least-squares, and minimum-evolution methods of phylogenetic inference

Andrey Rzhetsky, Masatoshi Nei, M. Nei, 1992, Journal of Molecular Evolution.

The evolution of animal chemosensory receptor gene repertoires: roles of chance and necessity

Masatoshi Nei, Yoshihito Niimura, M. Nei, 2008, Nature Reviews Genetics.

Evolution of genes and proteins.

Masatoshi Nei, M. Nei, R. K. Koehn, 1983 .

Accuracy of estimated phylogenetic trees from molecular data

Yoshio Tateno, Masatoshi Nei, Fumio Tajima, 2005, Journal of Molecular Evolution.

Purifying selection and birth-and-death evolution in the histone H4 gene family.

Masatoshi Nei, Helen Piontkivska, M. Nei, 2002, Molecular biology and evolution.

Mutation-Driven Evolution

Masatoshi Nei, M. Nei, 2013 .

Probability of Fixation of Nonfunctional Genes at Duplicate Loci

Masatoshi Nei, M. Nei, A. K. Roychoudhury, 1973, The American Naturalist.

Genomic drift and copy number variation of sensory receptor genes in humans

Masatoshi Nei, Yoshihiro Kawahara, M. Nei, 2007, Proceedings of the National Academy of Sciences.

A simple method for predicting the functional differentiation of duplicate genes and its application to MIKC-type MADS-box genes

Masatoshi Nei, Kerstin Kaufmann, Günter Theißen, 2005, Nucleic acids research.

Estimation of average number of nucleotide substitutions when the rate of substitution varies with nucleotide

Takashi Gojobori, Masatoshi Nei, M. Nei, 2005, Journal of Molecular Evolution.

Origins and Evolution of MicroRNA Genes in Drosophila Species

Masatoshi Nei, Sayaka Miura, M. Nei, 2010, Genome biology and evolution.

Inconsistency of the maximum parsimony method when the rate of nucleotide substitution is constant

Masatoshi Nei, Naoko Takezaki, M. Nei, 1994, Journal of Molecular Evolution.

Molecular evolution of the nontandemly repeated genes of the histone 3 multigene family.

Masatoshi Nei, Helen Piontkivska, M. Nei, 2002, Molecular biology and evolution.

Origin and evolution of influenza virus hemagglutinin genes.

Masatoshi Nei, M. Nei, Yoshiyuki Suzuki, 2002, Molecular biology and evolution.

Genetic Distance between Populations

Masatoshi Nei, M. Nei, 1972, The American Naturalist.

Human Polymorphic Genes: World Distribution

Masatoshi Nei, M. Nei, A. K. Roychoudhury, 1988 .

The neutral theory of molecular evolution in the genomic era.

Masatoshi Nei, M. Nei, Yoshiyuki Suzuki, 2010, Annual review of genomics and human genetics.

The Wilhelmine E. Key 2001 Invitational Lecture. Estimation of divergence times for a few mammalian and several primate species.

Masatoshi Nei, G. Glazko, M. Nei, 2002, The Journal of heredity.

Concerted and nonconcerted evolution of the Hsp70 gene superfamily in two sibling species of nematodes.

Masatoshi Nei, Nikolas Nikolaidis, M. Nei, 2004, Molecular biology and evolution.

Type I MADS-box genes have experienced faster birth-and-death evolution than type II MADS-box genes in angiosperms

Gynheung An, Masatoshi Nei, Hong Ma, 2004, Proceedings of the National Academy of Sciences of the United States of America.

Evolutionary change of the numbers of homeobox genes in bilateral animals.

Masatoshi Nei, M. Nei, J. Nam, 2005, Molecular biology and evolution.

Acceleration of genomic evolution caused by enhanced mutation rate in endocellular symbionts

Takeshi Itoh, Masatoshi Nei, M. Nei, 2002, Proceedings of the National Academy of Sciences of the United States of America.

Simulation study of the reliability and robustness of the statistical methods for detecting positive selection at single amino acid sites.

Masatoshi Nei, M. Nei, Yoshiyuki Suzuki, 2002, Molecular biology and evolution.

Estimation of the number of amino acid substitutions per site when the substitution rate varies among sites

Masatoshi Nei, M. Nei, T. Ota, 1994, Journal of Molecular Evolution.

False-positive selection identified by ML-based methods: examples from the Sig1 gene of the diatom Thalassiosira weissflogii and the tax gene of a human T-cell lymphotropic virus.

Masatoshi Nei, M. Nei, Yoshiyuki Suzuki, 2004, Molecular biology and evolution.

Evolutionary dynamics of olfactory receptor genes in fishes and tetrapods

Masatoshi Nei, Yoshihito Niimura, M. Nei, 2005, Proceedings of the National Academy of Sciences of the United States of America.

Comparative evolutionary analysis of olfactory receptor gene clusters between humans and mice.

Masatoshi Nei, Yoshihito Niimura, M. Nei, 2005, Gene.

Origins and evolution of the recA/RAD51 gene family: Evidence for ancient gene duplication and endosymbiotic gene transfer

Masatoshi Nei, Hong Ma, Hongzhi Kong, 2006, Proceedings of the National Academy of Sciences.