Daichi Shigemizu

发表

Extraction and Analysis of Chemical Modification Patterns in Drug Development

Susumu Goto, Minoru Kanehisa, Shujiro Okuda, 2009, J. Chem. Inf. Model..

PathPred: an enzyme-catalyzed metabolic pathway prediction server

Susumu Goto, Masaaki Kotera, Yuki Moriya, 2010, Nucleic Acids Res..

Using Functional Signatures to Identify Repositioned Drugs for Breast, Myelogenous Leukemia and Prostate Cancer

Yajie Wang, Chia-Ling Huang, Zhenjun Hu, 2012, PLoS Comput. Biol..

Publisher Correction: IMSindel: An accurate intermediate-size indel detection tool incorporating de novo assembly and gapped global-local alignment with split read analysis

Tatsuhiko Tsunoda, Kouichi Ozaki, Shujiro Okuda, 2018, Scientific Reports.

Hierarchical Maximum Likelihood Clustering Approach

Alok Sharma, Tatsuhiko Tsunoda, Daichi Shigemizu, 2017, IEEE Transactions on Biomedical Engineering.

Stepwise iterative maximum likelihood clustering approach

Alok Sharma, Yosvany López, Tatsuhiko Tsunoda, 2016, BMC Bioinformatics.

Clustering of Small-Sample Single-Cell RNA-Seq Data via Feature Clustering and Selection

Daichi Shigemizu, Edwin Vans, Alok Sharma, 2019, PRICAI.

Computational Prediction of Lysine Pupylation Sites in Prokaryotic Proteins Using Position Specific Scoring Matrix into Bigram for Feature Extraction

Abdollah Dehzangi, Daichi Shigemizu, Abel Avitesh Chandra, 2019, PRICAI.

GlyStruct: glycation prediction using structural properties of amino acid residues

Abdollah Dehzangi, Alok Sharma, Daichi Shigemizu, 2019, BMC Bioinformatics.

Network-Based Analysis and Characterization of Adverse Drug-Drug Interactions

Susumu Goto, Masaaki Kotera, Minoru Kanehisa, 2011, J. Chem. Inf. Model..

DeepInsight: A methodology to transform a non-image data to an image for convolution neural network architecture

Tatsuhiko Tsunoda, Daichi Shigemizu, Keith A. Boroevich, 2019, Scientific Reports.

Searching for Regulatory Elements of Alternative Splicing Events Using Phylogenetic Footprinting

Osamu Maruyama, Daichi Shigemizu, O. Maruyama, 2004, WABI.

Computational Pipelines and Workflows in Bioinformatics

Ronesh Sharma, Yosvany López, Tatsuhiko Tsunoda, 2019, Encyclopedia of Bioinformatics and Computational Biology.

JAMIR-eQTL: Japanese genome-wide identification of microRNA expression quantitative trait loci across dementia types

Kouichi Ozaki, Daichi Shigemizu, Shumpei Niida, 2021, Database J. Biol. Databases Curation.

Novel Calmodulin Mutations Associated With Congenital Arrhythmia Susceptibility

Takeshi Tsuchiya, Thomas Meitinger, Tatsuhiko Tsunoda, 2014, Circulation. Cardiovascular genetics.

The Construction of Risk Prediction Models Using GWAS Data and Its Application to a Type 2 Diabetes Prospective Cohort

Yusuke Nakamura, Tatsuhiko Tsunoda, Daichi Shigemizu, 2014, PloS one.

Integrated analysis of human genetic association study and mouse transcriptome suggests LBH and SHF genes as novel susceptible genes for amyloid-β accumulation in Alzheimer’s disease

Tatsuhiko Tsunoda, Takashi Morihara, Daichi Shigemizu, 2018, Human Genetics.

Chromothripsis-like chromosomal rearrangements induced by ionizing radiation using proton microbeam irradiation system

Tatsuhiko Tsunoda, Daichi Shigemizu, Teruaki Konishi, 2016, Oncotarget.

A comparison of machine learning classifiers for dementia with Lewy bodies using miRNA expression data

Tatsuhiko Tsunoda, Kouichi Ozaki, Daichi Shigemizu, 2019, BMC Medical Genomics.

A practical method to detect SNVs and indels from whole genome and exome sequencing data

Tatsuhiko Tsunoda, Daichi Shigemizu, Hidewaki Nakagawa, 2013, Scientific Reports.

Performance comparison of four commercial human whole-exome capture platforms

Tatsuhiko Tsunoda, Daichi Shigemizu, Keith A. Boroevich, 2015, Scientific Reports.

High-Risk Ovarian Cancer Based on 126-Gene Expression Signature Is Uniquely Characterized by Downregulation of Antigen Presentation Pathway

Tatsuhiko Tsunoda, Hiroyuki Seki, Daichi Shigemizu, 2012, Clinical Cancer Research.

Characterization and classification of adverse drug interactions.

Susumu Goto, Masaaki Kotera, Minoru Kanehisa, 2010, Genome informatics. International Conference on Genome Informatics.

IRX4 at 5p15 suppresses prostate cancer growth through the interaction with vitamin D receptor, conferring prostate cancer susceptibility.

Yusuke Nakamura, Tatsuhiko Tsunoda, Daichi Shigemizu, 2012, Human molecular genetics.

A combination of targeted enrichment methodologies for whole-exome sequencing reveals novel pathogenic mutations

Tatsuhiko Tsunoda, Daichi Shigemizu, Keith A. Boroevich, 2015, Scientific Reports.