Zhihao Yang

发表

Neural network-based approaches for biomedical relation classification: A review

Yijia Zhang, Hongfei Lin, Zhihao Yang, 2019, J. Biomed. Informatics.

Construction of dynamic probabilistic protein interaction networks for protein complex identification

Yijia Zhang, Hongfei Lin, Zhihao Yang, 2016, BMC Bioinformatics.

ML-CNN: A novel deep learning based disease named entity recognition architecture

Hongfei Lin, Zhihao Yang, Yin Zhang, 2016, 2016 IEEE International Conference on Bioinformatics and Biomedicine (BIBM).

Extracting drug-drug interactions with hybrid bidirectional gated recurrent unit and graph convolutional network

Yijia Zhang, Hongfei Lin, Zhihao Yang, 2019, J. Biomed. Informatics.

Gene Name Automatic Recognition in Biomedical Literature

Hongfei Lin, Zhihao Yang, Jing Zhao, 2006, 2006 6th World Congress on Intelligent Control and Automation.

A Boosting Approach for Learning to Rank Using SVD with Partially Labeled Data

Hongfei Lin, Zhihao Yang, Yuan Lin, 2009, AIRS.

Deep neural network based protein-protein interaction extraction from biomedical literature

Hongfei Lin, Zhihao Yang, Ling Luo, 2015, 2015 IEEE International Conference on Bioinformatics and Biomedicine (BIBM).

CIDExtractor: A chemical-induced disease relation extraction system for biomedical literature

Hongfei Lin, Zhihao Yang, Yin Zhang, 2016, 2016 IEEE International Conference on Bioinformatics and Biomedicine (BIBM).

Biomedical event trigger detection by dependency-based word embedding

Yijia Zhang, Hongfei Lin, Zhihao Yang, 2015, 2015 IEEE International Conference on Bioinformatics and Biomedicine (BIBM).

Using Orthogonal Design in Selecting Health States for the Construction of EQ-5D-3L Value Set

Zhihao Yang, Nan Luo, J van Busschbach, 2016 .

DUTIR at TREC 2006: Genomics and Enterprise Tracks

Hongfei Lin, Zhihao Yang, Baoyan Liu, 2006, TREC.

GrEDeL: A Knowledge Graph Embedding Based Method for Drug Discovery From Biomedical Literatures

Hongfei Lin, Zhihao Yang, Michel Dumontier, 2019, IEEE Access.

Protein-Protein Interaction Article Classification: A Knowledge-enriched Self-Attention Convolutional Neural Network Approach

Yijia Zhang, Hongfei Lin, Zhihao Yang, 2018, 2018 IEEE International Conference on Bioinformatics and Biomedicine (BIBM).

Remote-controllable home system based load aggregation management system

Zhihao Yang, Haoming Liu, Chengkai Zhang, 2017, 2017 Chinese Automation Congress (CAC).

Exploiting the performance of dictionary-based bio-entity name recognition in biomedical literature

Hongfei Lin, Zhihao Yang, Yanpeng Li, 2008, Comput. Biol. Chem..

Combining labeled and unlabeled data for biomédical event extraction

Qian Xu, Hongfei Lin, Zhihao Yang, 2012, 2012 IEEE International Conference on Bioinformatics and Biomedicine Workshops.

Enhancing Biomedical Text Summarization Using Semantic Relation Extraction

Hongfei Lin, Zhihao Yang, Yanpeng Li, 2011, PloS one.

Two Approaches for Biomedical Text Classification

Zhihao Yang, Yanpeng Li, Honfei Lin, 2007, 2007 1st International Conference on Bioinformatics and Biomedical Engineering.

Predicting protein complexes in protein interaction networks: A supervised learning based method

Hongfei Lin, Zhihao Yang, Nan Tang, 2013, BIBM.

PPIExtractor: A Protein Interaction Extraction and Visualization System for Biomedical Literature

Hongfei Lin, Zhihao Yang, Zhehuan Zhao, 2013, IEEE Transactions on NanoBioscience.

Identifying protein complexes with fuzzy machine learning model

Hongfang Liu, Bo Xu, Hongfei Lin, 2013, Proteome Science.

Data integration and supervised learning based protein complex detection method

Xiaohua Hu, Hongfei Lin, Zhihao Yang, 2014, 2014 IEEE International Conference on Bioinformatics and Biomedicine (BIBM).

Deep graph search based disease related knowledge summarization from biomedical literature

Hongfei Lin, Zhihao Yang, Jian Wang, 2014, 2014 IEEE International Conference on Bioinformatics and Biomedicine (BIBM).

Opinion Mining in e-Learning System

Hongfei Lin, Zhihao Yang, Dan Song, 2007, 2007 IFIP International Conference on Network and Parallel Computing Workshops (NPC 2007).

A parallel fuzzy rule discovery algorithm and future goods automated trading system

Xiaodong Liu, Zhihao Yang, Xiaolin Liu, 2017, 2017 36th Chinese Control Conference (CCC).

KeSACNN: a protein-protein interaction article classification approach based on deep neural network

Jian Wang, Hongfei Lin, Zhihao Yang, 2019 .

Ontology integration to identify protein complex in protein interaction networks

Bo Xu, Hongfei Lin, Zhihao Yang, 2010, 2010 IEEE International Conference on Bioinformatics and Biomedicine (BIBM).

A hybrid protein-protein interaction triple extraction method for biomedical literature

Hongfei Lin, Zhihao Yang, Cong Sun, 2017, 2017 IEEE International Conference on Bioinformatics and Biomedicine (BIBM).

Parallel Dynamic Analysis of a Large-Scale Water Conveyance Tunnel under Seismic Excitation Using ALE Finite-Element Method

Zhihao Yang, Xianlong Jin, Xiaoqing Wang, 2016 .

A parallel C4.5 decision tree algorithm based on MapReduce

Xiaodong Liu, Zhihao Yang, Xiaolin Liu, 2017, Concurr. Comput. Pract. Exp..

Biomedical event trigger detection by dependency-based word embedding

Hongfei Lin, Zhihao Yang, Yuanyuan Sun, 2015, BIBM.

The impact of protein interaction networks' characteristics on computational complex detection methods.

Bo Xu, Xiaoxia Liu, Hongfei Lin, 2018, Journal of theoretical biology.

Classifying protein complexes from candidate subgraphs using fuzzy machine learning model

Hongfang Liu, Kavishwar B. Wagholikar, Bo Xu, 2012, 2012 IEEE International Conference on Bioinformatics and Biomedicine Workshops.

DUTIR at the CCKS-2018 Task1: A Neural Network Ensemble Approach for Chinese Clinical Named Entity Recognition

Hongfei Lin, Zhihao Yang, Ling Luo, 2018, CCKS Tasks.

Identifying Protein Complexes from PPI Networks Using GO Semantic Similarity

Yijia Zhang, Hongfei Lin, Zhihao Yang, 2011, 2011 IEEE International Conference on Bioinformatics and Biomedicine.

An attention‐based BiLSTM‐CRF approach to document‐level chemical named entity recognition

Hongfei Lin, Zhihao Yang, Yin Zhang, 2018, Bioinform..

Integrating shortest dependency path and sentence sequence into a deep learning framework for relation extraction in clinical text

Zhiheng Li, Zhihao Yang, Yaoyun Zhang, 2019, BMC Medical Informatics and Decision Making.

Enhancing the accuracy of knowledge discovery: a supervised learning method

Feng Zhou, Hongfei Lin, Zhihao Yang, 2014, BMC Bioinformatics.

BioWordVec, improving biomedical word embeddings with subword information and MeSH

Qingyu Chen, Zhiyong Lu, Hongfei Lin, 2019, Scientific Data.

A neural network approach to chemical and gene/protein entity recognition in patents

Yin Zhang, Hongfei Lin, Zhihao Yang, 2018, Journal of Cheminformatics.

Hierarchical Recurrent Convolutional Neural Network for Chemical-protein Relation Extraction from Biomedical Literature

Yijia Zhang, Hongfei Lin, Zhihao Yang, 2018, 2018 IEEE International Conference on Bioinformatics and Biomedicine (BIBM).

KeSACNN: a protein-protein interaction article classification approach based on deep neural network

Jian Wang, Hongfei Lin, Zhihao Yang, 2019, Int. J. Data Min. Bioinform..

SVM-based Protein-Protein Interaction Extraction from Medline abstracts

Hongfei Lin, Zhihao Yang, Baojin Cui, 2007, 2007 Second International Conference on Bio-Inspired Computing: Theories and Applications.

A multi-task learning based approach to biomedical entity relation extraction

Yijia Zhang, Hongfei Lin, Zhihao Yang, 2018, 2018 IEEE International Conference on Bioinformatics and Biomedicine (BIBM).

Disease-specific protein complex detection in the human protein interaction network with a supervised learning method

Xiaoxia Liu, Hongfei Lin, Zhihao Yang, 2016, 2016 IEEE International Conference on Bioinformatics and Biomedicine (BIBM).

A supervised term ranking model for diversity enhanced biomedical information retrieval

Jian Wang, Yijia Zhang, Zhihao Yang, 2019, BMC Bioinformatics.

Passage retrieval based hidden knowledge discovery from biomedical literature

Hongfei Lin, Zhihao Yang, Ran Chen, 2011, Expert Syst. Appl..

HMNPPID: A Database of Protein-protein Interactions Associated with Human Malignant Neoplasms

Yijia Zhang, Hongfei Lin, Zhihao Yang, 2018, 2018 IEEE International Conference on Bioinformatics and Biomedicine (BIBM).

Integrating experimental and literature protein-protein interaction data for protein complex prediction

Yijia Zhang, Hongfei Lin, Zhihao Yang, 2015, BMC Genomics.

HMNPPID—human malignant neoplasm protein–protein interaction database

Jian Wang, Zhiheng Li, Yijia Zhang, 2019, Human Genomics.

Back-stepping Sliding Mode Control Based on Invariant Set and Nonlinear Disturbance Observer for HSV with Attitude Constraints

Zhihao Yang, Zhi Chen, Jian Fu, 2019, 2019 Chinese Control Conference (CCC).

Exploring Answer Information for Question Classification in Community Question Answering

Hongfei Lin, Zhihao Yang, Jian Wang, 2018, J. Multiple Valued Log. Soft Comput..

Drug name recognition in biomedical texts: a machine-learning-based method.

Hongfei Lin, Zhihao Yang, Yanpeng Li, 2014, Drug discovery today.

Exploring the relation between the characteristics of protein interaction networks and the performances of computational complex detection methods

Xiaoxia Liu, Hongfei Lin, Zhihao Yang, 2014, 2014 IEEE International Conference on Bioinformatics and Biomedicine (BIBM).

Exploiting the contextual cues for bio-entity name recognition in biomedical literature

Hongfei Lin, Zhihao Yang, Yanpeng Li, 2008, J. Biomed. Informatics.

Fractal descriptor applied to the classification of HEp-2 cell patterns

Bo Song, Zhihao Yang, Yuanyuan Sun, 2014, 2014 IEEE International Conference on Bioinformatics and Biomedicine (BIBM).

A Deep Learning Approach With Deep Contextualized Word Representations for Chemical–Protein Interaction Extraction From Biomedical Literature

Hongfei Lin, Zhihao Yang, Jian Wang, 2019, IEEE Access.

Ontology integration to identify protein complex in protein interaction networks

Bo Xu, Hongfei Lin, Zhihao Yang, 2010, BIBM.

DIGNiFI: Discovering causative genes for orphan diseases using protein-protein interaction networks

Zhiyong Lu, Hongfei Lin, Zhihao Yang, 2016, BMC Systems Biology.

Full-attention Based Drug Drug Interaction Extraction Exploiting User-generated Content

Feng Xia, Bo Xu, Wei Zheng, 2018, 2018 IEEE International Conference on Bioinformatics and Biomedicine (BIBM).

Protein-Protein Interactions Extraction from Biomedical Literatures

Hongfei Lin, Zhihao Yang, Yanpeng Li, 2011 .

Applying Feature Coupling Generalization for Protein-Protein Interaction Extraction

Hongfei Lin, Zhihao Yang, Yanpeng Li, 2009, 2009 IEEE International Conference on Bioinformatics and Biomedicine.

Improve Diversity-oriented Biomedical Information Retrieval using Supervised Query Expansion

Yijia Zhang, Hongfei Lin, Zhihao Yang, 2018, 2018 IEEE International Conference on Bioinformatics and Biomedicine (BIBM).

An effective neural model extracting document level chemical-induced disease relations from biomedical literature

Bo Xu, Xiaoxia Liu, Yijia Zhang, 2018, J. Biomed. Informatics.

Feature Selection and Fault Diagnosis Method for Switchgear Cabinet

Zhihao Yang, Xiang Hu, Jing Zhang, 2015 .

A Knowledge Graph based Bidirectional Recurrent Neural Network Method for Literature-based Discovery

Yijia Zhang, Hongfei Lin, Zhihao Yang, 2018, 2018 IEEE International Conference on Bioinformatics and Biomedicine (BIBM).

BioPPISVMExtractor: A protein-protein interaction extractor for biomedical literature using SVM and rich feature sets

Hongfei Lin, Zhihao Yang, Yanpeng Li, 2010, J. Biomed. Informatics.

WECA: A WordNet-Encoded Collocation-Attention Network for Homographic Pun Recognition

Di Wu, Hongfei Lin, Zhihao Yang, 2018, EMNLP.

Research on fuzzy rules extraction of futures trading based on MapReduce

Xiaodong Liu, Zhihao Yang, Xiaolin Liu, 2017, 2017 IEEE 2nd International Conference on Cloud Computing and Big Data Analysis (ICCCBDA).

A protein-protein interaction extraction approach based on deep neural network

Hongfei Lin, Zhihao Yang, Jian Wang, 2016, Int. J. Data Min. Bioinform..

Hash Subgraph Pairwise Kernel for Protein-Protein Interaction Extraction

Yijia Zhang, Hongfei Lin, Zhihao Yang, 2012, IEEE/ACM Transactions on Computational Biology and Bioinformatics.

Biomolecular event trigger detection using neighborhood hash features.

Yijia Zhang, Hongfei Lin, Zhihao Yang, 2013, Journal of theoretical biology.

Learning to rank for biomedical information retrieval

Hongfei Lin, Zhihao Yang, Bo Xu, 2015, 2015 IEEE International Conference on Bioinformatics and Biomedicine (BIBM).

Learning an enriched representation from unlabeled data for protein-protein interaction extraction

Xiaohua Hu, Hongfei Lin, Zhihao Yang, 2010, BMC Bioinformatics.

Semi-supervised method for biomedical event extraction

Qian Xu, Hongfei Lin, Zhihao Yang, 2013, Proteome Science.

Chemical-protein interaction extraction from biomedical literature: a hierarchical recurrent convolutional neural network method

Jian Wang, Hongfei Lin, Zhihao Yang, 2019, Int. J. Data Min. Bioinform..

Identifying protein complexes based on node embeddings obtained from protein-protein interaction networks

Bo Xu, Xiaoxia Liu, Hongfei Lin, 2018, BMC Bioinform..

A method for predicting protein complex in dynamic PPI networks

Yijia Zhang, Hongfei Lin, Zhihao Yang, 2016, BMC Bioinformatics.

Filtering Gene Ontology semantic similarity for identifying protein complexes in large protein interaction networks

Yijia Zhang, Hongfei Lin, Zhihao Yang, 2012, Proteome Science.

Incorporating User Generated Content for Drug Drug Interaction Extraction Based on Full Attention Mechanism

Zhihao Yang, Zhehuan Zhao, Jian Wang, 2019, IEEE Transactions on NanoBioscience.

DUTIR at TREC 2007 Genomics Track

Xiao Zhang, Hongfei Lin, Zhihao Yang, 2007, TREC.

Bi-directional Capsule Network Model for Chinese Biomedical Community Question Answering

Hongfei Lin, Zhihao Yang, Bo Xu, 2019, NLPCC.

Protein Complex Prediction in Large Ontology Attributed Protein-Protein Interaction Networks

Bo Xu, Yijia Zhang, Hongfei Lin, 2013, IEEE/ACM Transactions on Computational Biology and Bioinformatics.

Drug–drug interaction extraction via hierarchical RNNs on sequence and shortest dependency paths

Wei Zheng, Yijia Zhang, Hongfei Lin, 2017, Bioinform..

A graph kernel based on context vectors for extracting drug-drug interactions

Yijia Zhang, Hongfei Lin, Zhihao Yang, 2016, J. Biomed. Informatics.

DUTIR at TREC 2007 Blog Track

Qin Tang, Hongfei Lin, Zhihao Yang, 2007, TREC.

Hongfei Lin, Zhihao Yang, Jian Wang, 2015, BioMed research international.

Two Phase Indexes Based Passage Retrieval in Biomedical Texts

Hongfei Lin, Zhihao Yang, Ran Chen, 2007, LSMS.

Asymptotic mean square stability analysis for cellular neural networks with random delays

Zhihao Yang, Jinbo Liu, Enwen Zhu, 2010, 2010 International Conference on Networking, Sensing and Control (ICNSC).

Integrating Various Resources for Gene Name Normalization

Hongfei Lin, Zhihao Yang, Yanpeng Li, 2012, PloS one.

A hybrid model based on neural networks for biomedical relation extraction

Yijia Zhang, Hongfei Lin, Zhihao Yang, 2018, J. Biomed. Informatics.

Improving the Performance of Bio-Entity Name Recognition in Biomedical Literature via the Contextual Cues

Hongfei Lin, Zhihao Yang, Yanpeng Li, 2007 .

DUTIR at TREC 2007 Enterprise Track

Hongfei Lin, Zhihao Yang, Hui Ren, 2007, TREC.

Uncertainty sampling-based active learning for protein-protein interaction extraction from biomedical literature

Hongfei Lin, Zhihao Yang, Baojin Cui, 2009, Expert Syst. Appl..

Combining multiple disambiguation methods for gene mention normalization

Ning Xia, Hongfei Lin, Zhihao Yang, 2011, Expert Syst. Appl..

SemaTyP: a knowledge graph based literature mining method for drug discovery

Xiaoxia Liu, Hongfei Lin, Zhihao Yang, 2018, BMC Bioinformatics.

Ranking support vector machine for multiple kernels output combination in protein–protein interaction extraction from biomedical literature

Yuan Lin, Hongfei Lin, Zhihao Yang, 2011, Proteomics.

Document triage for identifying protein–protein interactions affected by mutations: a neural network ensemble approach

Hongfei Lin, Zhihao Yang, Ling Luo, 2018, Database J. Biol. Databases Curation.

Discover potential adverse drug reactions using the skip-gram model

Hongfei Lin, Zhihao Yang, Bo Xu, 2015, 2015 IEEE International Conference on Bioinformatics and Biomedicine (BIBM).

2012 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2012, Philadelphia, PA, USA, October 4-7, 2012

Xiaohua Hu, Yunming Ye, Majid Sarrafzadeh, 2012, IEEE International Conference on Bioinformatics and Biomedicine.

Optimal Dispatching Strategy of Load Aggregators Considering Peak Load Shifting

Zhihao Yang, Haoming Liu, Ying Wei, 2019, 2019 IEEE Innovative Smart Grid Technologies - Asia (ISGT Asia).

Detecting Potential Adverse Drug Reactions Using Association Rules and Embedding Models

Hongfei Lin, Zhihao Yang, Bo Xu, 2017, ISBRA.

A multiple distributed representation method based on neural network for biomedical event extraction

Hongfei Lin, Zhihao Yang, Jianhai Zhang, 2017, BMC Medical Informatics and Decision Making.

Predicting User Relationship from Scratch

Hongfei Lin, Zhihao Yang, Xiaoxia Liu, 2015, SMP.

Incorporating Dictionary Features into Conditional Random Fields for Gene/Protein Named Entity Recognition

Hongfei Lin, Zhihao Yang, Yanpeng Li, 2007, PAKDD Workshops.

PPIExtractor: A protein-protein interaction Extractor for biomédical literature

Hongfei Lin, Zhihao Yang, Zhehuan Zhao, 2012, 2012 IEEE International Conference on Bioinformatics and Biomedicine.

Biomedical event trigger detection based on convolutional neural network

Honglei Li, Hongfei Lin, Zhihao Yang, 2016, Int. J. Data Min. Bioinform..

Drug drug interaction extraction from biomedical literature using syntax convolutional neural network

Hongfei Lin, Zhihao Yang, Ling Luo, 2016, Bioinform..

Learning to rank using query-level regression

Hongfei Lin, Zhihao Yang, Zheng Ye, 2011, SIGIR.

Exploring Useful Features for Biomedical Event Trigger Detection

Qian Xu, Hongfei Lin, Zhihao Yang, 2013, J. Multiple Valued Log. Soft Comput..

Adverse drug reaction detection via a multihop self-attention mechanism

Jian Wang, Yijia Zhang, Hongfei Lin, 2019, BMC Bioinformatics.

Detection of protein complexes from multiple protein interaction networks using graph embedding

Hongfei Lin, Zhihao Yang, Xiaoxia Liu, 2019, Artif. Intell. Medicine.

Detecting adverse drug reactions from social media based on multi-channel convolutional neural networks

Hongfei Lin, Zhihao Yang, Chen Shen, 2018, Neural Computing and Applications.

Neighborhood hash graph kernel for protein-protein interaction extraction

Yijia Zhang, Hongfei Lin, Zhihao Yang, 2011, J. Biomed. Informatics.

Incorporating rich background knowledge for gene named entity classification and recognition

Hongfei Lin, Zhihao Yang, Yanpeng Li, 2009, BMC Bioinformatics.

Chemical-protein interaction extraction from biomedical literature: a hierarchical recurrent convolutional neural network method

Jian Wang, Yijia Zhang, Zhihao Yang, 2019 .

Predicting Best Answerers for New Questions: An Approach Leveraging Distributed Representations of Words in Community Question Answering

Hongfei Lin, Zhihao Yang, Bo Xu, 2015, 2015 Ninth International Conference on Frontier of Computer Science and Technology.

Improve Biomedical Information Retrieval Using Modified Learning to Rank Methods

Liang Yang, Bo Xu, Hongfei Lin, 2018, IEEE/ACM Transactions on Computational Biology and Bioinformatics.

A syntactic rule-based method for automatic pathway information extraction from biomédical literature

Hongfei Lin, Zhihao Yang, Yanhua Wang, 2012, 2012 IEEE International Conference on Bioinformatics and Biomedicine Workshops.

Integrating multiple biomedical resources for protein complex prediction

Bo Xu, Yijia Zhang, Hongfei Lin, 2013, 2013 IEEE International Conference on Bioinformatics and Biomedicine.

Generating User-oriented Text Summarization Based on Social Networks Using Topic Models

Hongfei Lin, Zhihao Yang, Bo Xu, 2016, SMP.

Detecting Potential Adverse Drug Reactions from Health-Related Social Networks

Hongfei Lin, Zhihao Yang, Bo Xu, 2016, NLPCC/ICCPOL.

Enhancing Biomedical Named Entity Classification Using Terabyte Unlabeled Data

Hongfei Lin, Zhihao Yang, Yanpeng Li, 2008, AIRS.

Multiple kernel learning in protein-protein interaction extraction from biomedical literature

Xiao Zhang, Hongfei Lin, Zhihao Yang, 2011, Artif. Intell. Medicine.

PC-SENE: A node embedding based method for protein complex detection

Bo Xu, Yijia Zhang, Hongfei Lin, 2018, 2018 IEEE International Conference on Bioinformatics and Biomedicine (BIBM).

Enhancing the accuracy of knowledge discovery: A supervised learning method

Feng Zhou, Hongfei Lin, Zhihao Yang, 2013, 2013 IEEE International Conference on Bioinformatics and Biomedicine.

A network embedding model for pathogenic genes prediction by multi-path random walking on heterogeneous network

Jian Wang, Zhihao Yang, Bo Xu, 2019, BMC Medical Genomics.

Protein Complexes Detection Based on Global Network Representation Learning

Feng Xia, Bo Xu, Yijia Zhang, 2018, 2018 IEEE International Conference on Bioinformatics and Biomedicine (BIBM).

Disease named entity recognition from biomedical literature using a novel convolutional neural network

Hongfei Lin, Zhihao Yang, Lei Wang, 2017, BMC Medical Genomics.

Supervised Learning Based Hypothesis Generation from Biomedical Literature

Hongfei Lin, Zhihao Yang, Shengtian Sang, 2015, BioMed research international.

TREC 2005 Genomics Track Experiments at DUTAI

Hongfei Lin, Zhihao Yang, Baoyan Liu, 2005, TREC.

DUTIR in BioNLP-ST 2016: Utilizing Convolutional Network and Distributed Representation to Extract Complicate Relations

Honglei Li, Hongfei Lin, Zhihao Yang, 2016, BioNLP.

Multipath2vec: Predicting Pathogenic Genes via Heterogeneous Network Embedding

Yu Liu, Feng Xia, Lei Liu, 2018, 2018 IEEE International Conference on Bioinformatics and Biomedicine (BIBM).

DUTIR at TREC 2008 Relevance Feedback Track

Hongfei Lin, Zhihao Yang, Yuan Lin, 2008, TREC.

BioPPIExtractor: A protein-protein interaction extraction system for biomedical literature

Hongfei Lin, Zhihao Yang, Baodong Wu, 2009, Expert Syst. Appl..

Chemical–protein interaction extraction via contextualized word representations and multihead attention

Yijia Zhang, Zhihao Yang, Yuanyuan Sun, 2019, Database J. Biol. Databases Curation.

An attention-based effective neural model for drug-drug interactions extraction

Yijia Zhang, Hongfei Lin, Zhihao Yang, 2017, BMC Bioinformatics.

Ranking SVM for multiple kernels output combination in protein-protein interaction extraction from biomedical literature

Hongfei Lin, Zhihao Yang, Nan Tang, 2010, 2010 IEEE International Conference on Bioinformatics and Biomedicine (BIBM).