Brian Yuan Chen

发表

A statistical model of overlapping volume in ligand binding cavities

Brian Yuan Chen, Soutir Bandyopadhyay, S. Bandyopadhyay, 2011, 2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops (BIBMW).

A gesture-based interface for the exploration and classification of protein binding cavities

Brian Yuan Chen, Zachary A. Daniels, Steven R. Stinson, 2014, MARS '14.

A statistical model of electrostatic isopotential variation in serine protease binding cavities

Brian Yuan Chen, Rachel Y. Okun, B. Chen, 2015, 2015 IEEE International Conference on Bioinformatics and Biomedicine (BIBM).

Predicting protein-ligand binding specificity based on ensemble clustering

Brian Yuan Chen, Ziyi Guo, 2015, 2015 IEEE International Conference on Bioinformatics and Biomedicine (BIBM).

Aligning ligand binding cavities by optimizing superposed volume

Katya Scheinberg, Brian Yuan Chen, Ruobing Chen, 2012, 2012 IEEE International Conference on Bioinformatics and Biomedicine.

Variational Bayesian clustering on protein cavity conformations for detecting influential amino acids

Brian Yuan Chen, Ziyi Guo, 2014, BCB.

VASP-S: A Volumetric Analysis and Statistical Model for Predicting Steric Influences on Protein-Ligand Binding Specificity

Brian Yuan Chen, Soutir Bandyopadhyay, S. Bandyopadhyay, 2011, 2011 IEEE International Conference on Bioinformatics and Biomedicine.

Conformational Sampling Reveals Amino Acids with a Steric Influence on Specificity

Brian Yuan Chen, Ziyi Guo, 2015, J. Comput. Biol..

Isolating Influential Regions of Electrostatic Focusing in Protein and DNA Structure

Wenjie Yang, Brian Yuan Chen, Seth Blumenthal, 2013, IEEE/ACM Transactions on Computational Biology and Bioinformatics.

A flexible volumetric comparison of protein cavities can reveal patterns in ligand binding specificity

Brian Yuan Chen, Soutir Bandyopadhyay, Ziyi Guo, 2014, BCB.

Superposition of protein structures using electrostatic isopotentials

Katya Scheinberg, Brian Yuan Chen, Ziyi Guo, 2015, 2015 IEEE International Conference on Bioinformatics and Biomedicine (BIBM).

A Regionalizable Statistical Model of Intersecting Regions in protein-ligand binding Cavities

Brian Yuan Chen, Soutir Bandyopadhyay, S. Bandyopadhyay, 2012, J. Bioinform. Comput. Biol..

A map of binding cavity conformations reveals differences in binding specificity

Brian Yuan Chen, Ziyi Guo, Ziyi Guo, 2016, 2016 IEEE International Conference on Bioinformatics and Biomedicine (BIBM).