Marcus H. Stoiber

发表

BasecRAWller: Streaming Nanopore Basecalling Directly from Raw Signal

James B. Brown, Marcus H. Stoiber, James B. Brown, 2017, bioRxiv.

Low-frequency and rare exome chip variants associate with fasting glucose and type 2 diabetes susceptibility

Inês Barroso, Jiyoung Heo, Beverley Balkau, 2015, Nature communications.

Comparative Analysis of the Transcriptome across Distant Species

Peter J. Bickel, Raymond K. Auerbach, Peter J. Park, 2014, Nature.

Diversity and dynamics of the Drosophila transcriptome

James B. Brown, Benjamin W. Booth, Marcus H. Stoiber, 2014, Nature.

Biological Networks: Dynamics, Mechanisms and Responses

Marcus H. Stoiber, 2015 .

Lawrence Berkeley National Laboratory Recent Work Title Extensive cross-regulation of post-transcriptional regulatory networks in Drosophila Permalink

James B. Brown, Marcus H. Stoiber, P. Bickel, 2015 .

Multiomic atlas with functional stratification and developmental dynamics of zebrafish cis-regulatory elements

Juan M. Vaquerizas, Anne E. Eagle, Piotr J. Balwierz, 2022, Nature genetics.

Early transcriptional response pathways in Daphnia magna are coordinated in networks of crustacean‐specific genes

James B. Brown, Marcus H. Stoiber, D. Rusch, 2018, Molecular ecology.

Genome-guided transcript assembly from integrative analysis of RNA sequence data

James B. Brown, Benjamin W. Booth, Marcus H. Stoiber, 2014, Nature Biotechnology.

Discovery of widespread transcription initiation at microsatellites predictable by sequence-based deep neural network

Martin S. Taylor, Jay W. Shin, Thomas J. Ha, 2021, Nature Communications.

De novo Identification of DNA Modifications Enabled by Genome-Guided Nanopore Signal Processing

Ji Eun Lee, Rob Egan, Joshua Quick, 2017, bioRxiv.

Extensive cross-regulation of post-transcriptional regulatory networks in Drosophila

James B. Brown, Michael O Duff, Brenton R Graveley, 2015, Genome research.

Diverse Hormone Response Networks in 41 Independent Drosophila Cell Lines

Marcus H. Stoiber, S. Celniker, L. Cherbas, 2016, G3: Genes, Genomes, Genetics.

Integrated annotation and analysis of genomic features reveal new types of functional elements and large-scale epigenetic phenomena in the developing zebrafish

Juan M. Vaquerizas, Anne E. Eagle, Piotr J. Balwierz, 2021 .

Age-related gene expression in luminal epithelial cells is driven by a microenvironment made from myoepithelial cells

James B. Brown, Rosalyn W. Sayaman, Marcus H. Stoiber, 2017, Aging.

*-DCC: A platform to collect, annotate, and explore a large variety of sequencing experiments

James B Brown, James B. Brown, Matthias Hörtenhuber, 2020, GigaScience.

Comparative Analysis of the Transcriptome across Distant Species

Dmitri D. Pervouchine, Gennifer E. Merrihew, Benjamin W. Booth, 2014, Nature.

Genome-guided transcript assembly from integrative analysis of RNA sequence data

Benjamin W. Booth, Marcus H. Stoiber, R. Hoskins, 2016 .