Urban Bren

发表

Carcinogenesis induced by Aflatoxin B1: A computational study

Tibor Kuna, Urban Bren, 2015, 2015 IEEE 15th International Conference on Bioinformatics and Bioengineering (BIBE).

Novel geometric approach for photosensor construction based on dye-sensitization of TiO2 nanoparticles on stainless steel

Urban Bren, Martin Rozman, Dimitra Sygkridou, 2019, Sensors and Actuators A: Physical.

Dynamic Behavior of Avian Influenza A Virus Neuraminidase Subtype H5N1 in Complex with Oseltamivir, Zanamivir, Peramivir, and Their Phosphonate Analogues

Thanyada Rungrotmongkol, Urban Bren, Thanyarat Udommaneethanakit, 2009, J. Chem. Inf. Model..

Development and Validation of Empirical Force Field Parameters for Netropsin

Milan Hodoscek, Urban Bren, Joze Koller, 2005, J. Chem. Inf. Model..

Pyranose Dehydrogenase Ligand Promiscuity: A Generalized Approach to Simulate Monosaccharide Solvation, Binding, and Product Formation

Dietmar Haltrich, Chris Oostenbrink, Wilfred F. van Gunsteren, 2014, PLoS Comput. Biol..

Potential Energy Function for Fentanyl-Based Opioid Pain Killers

Milan Hodoscek, Urban Bren, Christoph Stein, 2020, J. Chem. Inf. Model..

Molecular dynamics simulations give insight into d-glucose dioxidation at C2 and C3 by Agaricus meleagris pyranose dehydrogenase

Dietmar Haltrich, Chris Oostenbrink, Urban Bren, 2013, Journal of Computer-Aided Molecular Design.

Cytochrome P450 3A4 Inhibition by Ketoconazole: Tackling the Problem of Ligand Cooperativity Using Molecular Dynamics Simulations and Free-Energy Calculations

Chris Oostenbrink, Urban Bren, C. Oostenbrink, 2012, J. Chem. Inf. Model..

Discovery of Novel Potential Human Targets of Resveratrol by Inverse Molecular Docking

Urban Bren, Janez Konc, Samo Lešnik, 2019, J. Chem. Inf. Model..

CHARMM Force-Field Parameters for Morphine, Heroin, and Oliceridine, and Conformational Dynamics of Opioid Drugs

Milan Hodoscek, Urban Bren, Samo Lesnik, 2021, J. Chem. Inf. Model..

Steric and electrostatic effects at the C2 atom substituent influence replication and miscoding of the DNA deamination product deoxyxanthosine and analogs by DNA polymerases.

Urban Bren, F. Guengerich, C. Rizzo, 2009, Journal of molecular biology.

Guanine alkylation by the potent carcinogen aflatoxin B1: quantum chemical calculations.

Urban Bren, F Peter Guengerich, Janez Mavri, 2007, Chemical research in toxicology.

Cooperative binding of aflatoxin B1 by cytochrome P450 3A4: a computational study.

Chris Oostenbrink, Urban Bren, Julian E. Fuchs, 2014, Chemical research in toxicology.

Decomposition of the solvation free energies of deoxyribonucleoside triphosphates using the free energy perturbation method.

Urban Bren, Jan Florián, Václav Martínek, 2006, The journal of physical chemistry. B.

Free energy simulations of uncatalyzed DNA replication fidelity: structure and stability of T.G and dTTP.G terminal DNA mismatches flanked by a single dangling nucleotide.

Urban Bren, Jan Florian, J. Florián, 2006, The journal of physical chemistry. B.

DNA duplex stability: the role of preorganized electrostatics.

Urban Bren, Matevz Bren, Jan Florián, 2010, The journal of physical chemistry. B.

Microwave catalysis through rotationally hot reactive species.

Urban Bren, Janez Mavri, J. Mavri, 2008, The journal of physical chemistry. A.

Inherent stereospecificity in the reaction of aflatoxin B(1) 8,9-epoxide with deoxyguanosine and efficiency of DNA catalysis.

Urban Bren, F Peter Guengerich, F. Guengerich, 2009, Chemical research in toxicology.

Individual degrees of freedom and the solvation properties of water.

Urban Bren, Dušanka Janežič, 2012, The Journal of chemical physics.

Do all pieces make a whole? Thiele cumulants and the free energy decomposition

Urban Bren, Matevž Bren, Jan Florián, 2007 .