Yaoyun Zhang

发表

Leveraging syntactic and semantic graph kernels to extract pharmacokinetic drug drug interactions from biomedical literature

Yaoyun Zhang, Heng-Yi Wu, Jun Xu, 2016, BMC Systems Biology.

Cloud evolved packet core network architecture based on Software-Defined Networking (SDN)

Yaoyun Zhang, Zhigang Tian, Zhan Xu, 2017 .

ICRCS at Intent2: Applying Rough Set and Semantic Relevance for Subtopic Mining

Xiaolong Wang, Yaoyun Zhang, Xiaoqiang Zhou, 2013, NTCIR.

Using question classification to model user intentions of different levels

Xiaolong Wang, Xuan Wang, Yaoyun Zhang, 2009, 2009 IEEE International Conference on Systems, Man and Cybernetics.

A Chinese question answering system based on web search

Yang Xiang, Xiaolong Wang, Yaoyun Zhang, 2014, 2014 International Conference on Machine Learning and Cybernetics.

CogQTaxo: Modeling human cognitive process with a three-dimensional question taxonomy

Xiaolong Wang, Xuan Wang, Yaoyun Zhang, 2010, 2010 International Conference on Machine Learning and Cybernetics.

Ontology-based Normalization for Disease-Lab test Relation Extraction

Cui Tao, Yaoyun Zhang, Jingqi Wang, 2014, ICBO.

Semantic Role Labeling of Clinical Text: Comparing Syntactic Parsers and Features

Yaoyun Zhang, Jingqi Wang, Hua Xu, 2016, AMIA.

Special issue of BMC medical informatics and decision making on health natural language processing

Yaoyun Zhang, Hua Xu, V. G. Vinod Vydiswaran, 2019, BMC Medical Informatics and Decision Making.

CLAMP-PA: A machine learning based pre-annotation pipeline for corpus construction of clinical concepts

Yaoyun Zhang, Jingqi Wang, Hua Xu, 2018, American Medical Informatics Association Annual Symposium.

Adapting Word Embeddings from Multiple Domains to Symptom Recognition from Psychiatric Notes

Yaoyun Zhang, Jingqi Wang, Hua Xu, 2018, AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science.

Grammatical Error Correction Using Feature Selection and Confidence Tuning

Yang Xiang, Xiaolong Wang, Yaoyun Zhang, 2013, IJCNLP.

Exploring Temporal Patterns of Suicidal Behavior on Twitter

Jingcheng Du, Yaoyun Zhang, Hua Xu, 2018, 2018 IEEE International Conference on Healthcare Informatics Workshop (ICHI-W).

Opioid2FHIR: A system for extracting FHIR-compatible opioid prescriptions from clinical text

Yaoyun Zhang, Hua Xu, Jingqi Wang, 2020, 2020 IEEE International Conference on Bioinformatics and Biomedicine (BIBM).

Lightweight predicate extraction for patient-level cancer information and ontology development

Cui Tao, Yaoyun Zhang, Hua Xu, 2017, BMC Medical Informatics and Decision Making.

Detecting Contradictory and Consistent Citations in Biomedical Literature

Yaoyun Zhang, Jun Xu, Hua Xu, 2017, AMIA.

Chemical named entity recognition in patents by domain knowledge and unsupervised feature learning

Hui Chen, Yaoyun Zhang, Jun Xu, 2016, Database J. Biol. Databases Curation.

Integrating Multiple On-line Knowledge Bases for Disease-Lab Test Relation Extraction

Yaoyun Zhang, Jingqi Wang, Ergin Soysal, 2015, AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science.

A new question analysis approach for community question answering system

Xiaolong Wang, Xuan Wang, Yaoyun Zhang, 2009, Int. J. Asian Lang. Process..

Detecting Body Location Modifiers of Disorders in Clinical Texts via Sequence Labeling

Yaoyun Zhang, Jun Xu, Hua Xu, 2017, AMIA.

A hybrid approach to automatic de-identification of psychiatric notes.

Yaoyun Zhang, Hua Xu, Yonghui Wu, 2017, Journal of biomedical informatics.

Building energy system simulation : A case study renovation of an apartment located in Gävle Sweden

Yaoyun Zhang, 2014 .

Melaxtech: A report for CLEF 2020 - ChEMU Task of Chemical Reaction Extraction from Patent

Zhi Zhang, Yaoyun Zhang, Jingqi Wang, 2020, CLEF.

ICRC_HITSZ at RITE: Leveraging Multiple Classifiers Voting for Textual Entailment Recognition

Xiaolong Wang, Xuan Wang, Yaoyun Zhang, 2011, NTCIR.

Interweaving Domain Knowledge and Unsupervised Learning for Psychiatric Stressor Extraction from Clinical Notes

Yaoyun Zhang, Jun Xu, Hua Xu, 2017, IEA/AIE.

Parsing Clinical Text: How Good are the state-of-the-art Deep Learning Based Parsers?

Yaoyun Zhang, Hua Xu, Firat Tiryaki, 2018, 2018 IEEE International Conference on Healthcare Informatics Workshop (ICHI-W).

Toward a normalized clinical drug knowledge base in China—applying the RxNorm model to Chinese clinical drugs

Cui Tao, Li Wang, Yi Zhou, 2018, J. Am. Medical Informatics Assoc..

Detecting Anatomical Entities in Clinical Text

Jingcheng Du, Yaoyun Zhang, Jingqi Wang, 2018, American Medical Informatics Association Annual Symposium.

A study of deep learning approaches for medication and adverse drug event extraction from clinical text

Jingcheng Du, Yang Xiang, Cui Tao, 2019, J. Am. Medical Informatics Assoc..

Integrating shortest dependency path and sentence sequence into a deep learning framework for relation extraction in clinical text

Zhiheng Li, Zhihao Yang, Yaoyun Zhang, 2019, BMC Medical Informatics and Decision Making.

Guideline-driven data quality assessment- A case study of warfarin management

Yaoyun Zhang, Chunhua Weng, Hua Xu, 2018, AMIA.

Problematic Situation Analysis and Automatic Recognition for Chinese Online Conversational System

Yang Xiang, Xiaolong Wang, Yaoyun Zhang, 2014, CIPS-SIGHAN.

Ontological representation–oriented term normalization and standardization of the Research Domain Criteria

Jingcheng Du, Cui Tao, Yang Xiang, 2019, Health informatics journal.

Recognizing Disjoint Clinical Concepts in Clinical Text Using Machine Learning-based Methods

Xiaolong Wang, Yaoyun Zhang, Jingqi Wang, 2015, AMIA.

Bias Modeling for Distantly Supervised Relation Extraction

Yang Xiang, Yaoyun Zhang, Xiaolong Wang, 2015 .

A comparison of conditional random fields and structured support vector machines for chemical entity recognition in biomedical literature

Xiaolong Wang, Yaoyun Zhang, Jingqi Wang, 2015, Journal of Cheminformatics.

GWAS Finder: Search Engine for GWAS Datasets in Biomedical Literature

Yaoyun Zhang, Hua Xu, Xiao Dong, 2016, AMIA.

Diversifying Question Recommendations in Community-Based Question Answering

Xiaolong Wang, Xuan Wang, Yaoyun Zhang, 2011, ICONIP.

A Study of Neural Word Embeddings for Named Entity Recognition in Clinical Text

Yaoyun Zhang, Jun Xu, Hua Xu, 2015, AMIA.

Recognizing software names in biomedical literature using machine learning

Yaoyun Zhang, Qiang Wei, Hua Xu, 2019, Health Informatics J..

Applying a deep learning-based sequence labeling approach to detect attributes of medical concepts in clinical text

Yang Xiang, Zhiheng Li, Yaoyun Zhang, 2019, BMC Medical Informatics and Decision Making.

Evaluation of Vector Space Models for Medical Disorders Information Retrieval

Yaoyun Zhang, Hua Xu, Trevor Cohen, 2013, CLEF.

Parsing clinical text using the state-of-the-art deep learning based parsers: a systematic comparison

Yaoyun Zhang, Min Jiang, Hua Xu, 2019, BMC Medical Informatics and Decision Making.

Term Standardization and Normalization for Research Domain Criteria (RDoC)

Jingcheng Du, Yaoyun Zhang, Hua Xu, 2018, 2018 IEEE International Conference on Healthcare Informatics Workshop (ICHI-W).

Building a Biomedical Bilingual Parallel Corpus between Chinese and English from PubMed

Yaoyun Zhang, Hua Xu, Lingyi Tang, 2018, American Medical Informatics Association Annual Symposium.

Citation Sentiment Analysis in Clinical Trial Papers

Yaoyun Zhang, Jun Xu, Jingqi Wang, 2015, AMIA.

What Can Neural Networks Learn from Unlabeled Clinical Narratives?

Yaoyun Zhang, Jun Xu, Hua Xu, 2016, AMIA.

Precision medicine for breast cancer: extracting rich genetic and phenotypic information from Chinese clinical narratives

Yaoyun Zhang, Qin Zhang, Yuankai Ren, 2019, American Medical Informatics Association Annual Symposium.

A pilot study of mining association between psychiatric stressors and symptoms in tweets

Jingcheng Du, Cui Tao, Yaoyun Zhang, 2017, 2017 IEEE International Conference on Bioinformatics and Biomedicine (BIBM).

Domain Adaptation for Semantic Role Labeling of Clinical Text

Yaoyun Zhang, Jingqi Wang, Hua Xu, 2015, AMIA.

Search Datasets in Literature: A Case Study of GWAS

Yaoyun Zhang, Hua Xu, Xiao Dong, 2017, AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science.

Identifying Disease Hierarchical Relation with Concept Embeddings and Distant Supervision

Yaoyun Zhang, Hua Xu, Lingyi Tang, 2017, AMIA.

Extracting genetic alteration information for personalized cancer therapy from ClinicalTrials.gov

Yaoyun Zhang, Hua Xu, Trevor Cohen, 2016, J. Am. Medical Informatics Assoc..

Comparing Cancer Information Needs for Consumers in the US and China

Yaoyun Zhang, Jun Xu, Hua Xu, 2017, MedInfo.

HITSZ-ICRC: Exploiting Classification Approach for Answer Selection in Community Question Answering

Xiaolong Wang, Yaoyun Zhang, Jun Xu, 2015, *SEMEVAL.

The International Conference on Intelligent Biology and Medicine 2018: Medical Informatics Thematic Track (MedicalInfo2018)

Cui Tao, Kai Wang, Yaoyun Zhang, 2019, BMC Medical Informatics and Decision Making.

UTHealth at SemEval-2016 Task 12: an End-to-End System for Temporal Information Extraction from Clinical Notes

Yaoyun Zhang, Jun Xu, Jingqi Wang, 2016, *SEMEVAL.

Detect Attributes of Medical Concepts via Sequence Labeling

Yang Xiang, Zhiheng Li, Yaoyun Zhang, 2019, 2019 IEEE International Conference on Healthcare Informatics (ICHI).

COVID-19 SignSym: a fast adaptation of a general clinical NLP tool to identify and normalize COVID-19 signs and symptoms to OMOP common data model

Yaoyun Zhang, Masoud Rouhizadeh, Huy Anh Pham, 2021, J. Am. Medical Informatics Assoc..

Extracting entities with attributes in clinical text via joint deep learning

Yaoyun Zhang, Qingcai Chen, Buzhou Tang, 2019, J. Am. Medical Informatics Assoc..

Extraction of BI-RADS findings from breast ultrasound reports in Chinese using deep learning approaches

Xin Zhang, Li Wang, Yaoyun Zhang, 2018, Int. J. Medical Informatics.

Erratum to: Extracting drug-enzyme relation from literature as evidence for drug drug interaction

Jingcheng Du, Cui Tao, Yaoyun Zhang, 2016, J. Biomed. Semant..

Towards practical temporal relation extraction from clinical notes: An analysis of direct temporal relations

Cui Tao, Yaoyun Zhang, Jun Xu, 2017, 2017 IEEE International Conference on Bioinformatics and Biomedicine (BIBM).

UTH_CCB: A report for SemEval 2014 – Task 7 Analysis of Clinical Text

Yaoyun Zhang, Jingqi Wang, Hua Xu, 2014, *SEMEVAL.

Time-sensitive clinical concept embeddings learned from large electronic health records

Yang Xiang, Cui Tao, Zhiheng Li, 2019, BMC Medical Informatics and Decision Making.

A Hybrid Model For Grammatical Error Correction

Yang Xiang, Xiaolong Wang, Yaoyun Zhang, 2013, CoNLL Shared Task.

Extracting drug-enzyme relation from literature as evidence for drug drug interaction

Jingcheng Du, Cui Tao, Yaoyun Zhang, 2016, J. Biomed. Semant..

An Extended Overview of the CLEF 2020 ChEMU Lab: Information Extraction of Chemical Reactions from Patents

Yaoyun Zhang, Patrick Ruch, Daniel M. Lowe, 2020, CLEF.

Extracting psychiatric stressors for suicide from social media using deep learning

Jingcheng Du, Cui Tao, Yaoyun Zhang, 2018, BMC Medical Informatics and Decision Making.

Psychiatric stressor recognition from clinical notes to reveal association with suicide

Yaoyun Zhang, Rui Li, Hua Xu, 2018, Health Informatics J..

NCCD-RxNorm: Linking Chinese Clinical Drugs to International Drug Vocabulary

Yaoyun Zhang, Jing Li, Mui Van Zandt, 2020, 2020 IEEE International Conference on Bioinformatics and Biomedicine (BIBM).

Improved classification based on predictive association rules

Lin Yao, Xuan Wang, Yaoyun Zhang, 2009, 2009 IEEE International Conference on Systems, Man and Cybernetics.

Identifying direct temporal relations between time and events from clinical notes

Cui Tao, Yaoyun Zhang, Jun Xu, 2018, BMC Medical Informatics and Decision Making.

Diversifying Information Needs in Results of Question Retrieval

Xiaolong Wang, Xuan Wang, Yaoyun Zhang, 2011, IJCNLP.

Clinical Abbreviation Disambiguation Using Neural Word Embeddings

Yaoyun Zhang, Jun Xu, Hua Xu, 2015, BioNLP@IJCNLP.

Leveraging existing corpora for de-identification of psychiatric notes using domain adaptation

Yaoyun Zhang, Hua Xu, Kirk Roberts, 2017, AMIA.

UTH-CCB: The Participation of the SemEval 2015 Challenge – Task 14

Yaoyun Zhang, Jun Xu, Jingqi Wang, 2015, *SEMEVAL.

Expressing Biomedical Ontologies in Natural Language for Expert Evaluation

Cui Tao, Yaoyun Zhang, Hua Xu, 2019, MedInfo.

CLAMP-ATR: A deep learning pipeline for attribute recognition of clinical concepts

Yaoyun Zhang, Hua Xu, Jingqi Wang, 2019, American Medical Informatics Association Annual Symposium.

Evaluating Word Embeddings from Multiple Domains for Symptom Recognition in Psychiatric Notes

Yaoyun Zhang, Hua Xu, Yonghui Wu, 2017, AMIA.

CD-REST: a system for extracting chemical-induced disease relation in literature

Yaoyun Zhang, Jun Xu, Jingqi Wang, 2016, Database J. Biol. Databases Curation.

Cloud evolved packet core network architecture based on Software-Defined Networking (SDN)

Yaoyun Zhang, Zhigang Tian, Zhan Xu, 2017 .

Understanding Consumers' Information Needs about Breast Cancer by Analyzing Online Questions

Yaoyun Zhang, Hua Xu, Hua Xu, 2013, AMIA.

Knowledge-Based Approach for Named Entity Recognition in Biomedical Literature: A Use Case in Biomedical Software Identification

Cui Tao, Yaoyun Zhang, Hua Xu, 2017, IEA/AIE.

Distant Supervision for Relation Extraction via Group Selection

Yang Xiang, Xiaolong Wang, Yaoyun Zhang, 2015, ICONIP.

A Preliminary Study of Coupling Transfer Learning with Active Learning for Clinical Named Entity Recognition between Two Institutions

Yaoyun Zhang, Hua Xu, Joshua C. Denny, 2014, AMIA.

Semantic Chunk Annotation for questions using Maximum Entropy

Xuan Wang, Wing W. Y. Ng, Yaoyun Zhang, 2008, 2008 IEEE International Conference on Systems, Man and Cybernetics.