Marta Szachniuk

发表

LCS-TA to identify similar fragments in RNA 3D structures

Tomasz Zok, Jakub Wiedemann, Maciej Milostan, 2017, BMC Bioinformatics.

Optimal pathway reconstruction on 3D NMR maps

Giovanni Felici, Jacek Blazewicz, Dominique de Werra, 2015, Discret. Appl. Math..

RNA FRABASE version 1.0: an engine with a database to search for the three-dimensional fragments within RNA structures

Marek Blazewicz, Marta Szachniuk, Mariusz Popenda, 2007, Nucleic Acids Res..

The Orderly Colored Longest Path Problem

Giovanni Felici, Marta Szachniuk, C De Cola, 2012 .

An Algorithm for an Automatic NOE Pathways Analysis of 2D NMR Spectra of RNA Duplexes

Jacek Blazewicz, Piotr Formanowicz, Marta Szachniuk, 2004, J. Comput. Biol..

RNA tertiary structure determination: NOE pathways construction by tabu search

Jacek Blazewicz, Marta Szachniuk, Adam Wójtowicz, 2005, Bioinform..

RNA FRABASE 2.0: an advanced web-accessible database with the capacity to search the three-dimensional fragments within RNA structures

Edmund K. Burke, Jacek Blazewicz, Marek Blazewicz, 2010, BMC Bioinformatics.

MCQ4Structures to compute similarity of molecule structures

Tomasz Zok, Marta Szachniuk, Mariusz Popenda, 2013, Central European Journal of Operations Research.

NMR Analysis of RNA Bulged Structures: Tabu Search Application in NOE Signal Assignment

Jacek Blazewicz, Marta Szachniuk, Ryszard W. Adamiak, 2005, 2005 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology.

RNApdbee—a webserver to derive secondary structures from pdb files of knotted and unknotted RNAs

Jacek Blazewicz, Tomasz Zok, Marta Szachniuk, 2014, Nucleic Acids Res..

The Orderly Colored Longest Path Problem - a survey of applications and new algorithms

Giovanni Felici, Jacek Blazewicz, Marta Szachniuk, 2014, RAIRO Oper. Res..

New functionality of RNAComposer: an application to shape the axis of miR160 precursor structure.

Tomasz Zok, Marta Szachniuk, Maciej Antczak, 2016, Acta biochimica Polonica.

Cerberus: A New Information Retrieval Tool for Marine Metagenomics

Renzo Kottmann, Frank Oliver Glöckner, Jacek Blazewicz, 2010 .

Automated RNA 3D Structure Prediction with RNAComposer.

Jacek Blazewicz, Marta Szachniuk, Ryszard W Adamiak, 2016, Methods in molecular biology.

New algorithms to represent complex pseudoknotted RNA structures in dot-bracket notation

Tomasz Zok, Marta Szachniuk, Maciej Antczak, 2017, Bioinform..

RNApdbee 2.0: multifunctional tool for RNA structure annotation

Jacek Blazewicz, Tomasz Zok, Marta Szachniuk, 2018, Nucleic Acids Res..

Building the library of RNA 3D nucleotide conformations using the clustering approach

Thomas Villmann, Jacek Blazewicz, Martin Riedel, 2015, Int. J. Appl. Math. Comput. Sci..

MLP accompanied beam search for the resonance assignment problem

Edmund K. Burke, Jacek Blazewicz, Erwin Pesch, 2013, J. Heuristics.

RNAfitme: a webserver for modeling nucleobase and nucleoside residue conformation in fixed-backbone RNA structures

Tomasz Zok, Marta Szachniuk, Maciej Antczak, 2018, BMC Bioinformatics.

Recent Advances in Operations Research in Computational Biology, Bioinformatics and Medicine

Giovanni Felici, Marta Szachniuk, Metin Türkay, 2016, RAIRO Oper. Res..

RNAvista: a webserver to assess RNA secondary structures with non-canonical base pairs

Jacek Blazewicz, Tomasz Zok, Marta Szachniuk, 2018, Bioinform..

RNAssess—a web server for quality assessment of RNA 3D structures

Jacek Blazewicz, Marta Szachniuk, Maciej Antczak, 2015, Nucleic Acids Res..

New in silico approach to assessing RNA secondary structures with non-canonical base pairs

Jacek Blazewicz, Tomasz Zok, Marta Szachniuk, 2015, BMC Bioinformatics.

An assignment walk through 3D NMR spectrum

Jacek Blazewicz, Marta Szachniuk, Mariusz Popenda, 2009, 2009 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology.

Evolutionary approach to NOE paths assignment in RNA structure elucidation

Jacek Blazewicz, Marta Szachniuk, Adam Wójtowicz, 2004, 2004 Symposium on Computational Intelligence in Bioinformatics and Computational Biology.

Virxicon: a lexicon of viral sequences

Thomas Villmann, Jacek Blazewicz, Marta Szachniuk, 2020, Bioinform..

Combinatorial analysis of 2D -NOESY spectra in Nuclear Magnetic Resonance spectroscopy of RNA molecules

Marta Szachniuk, M. Szachniuk, Marta Szachniuk, 2005 .

Sorting signal targeting mRNA into hepatic extracellular vesicles

Jacek Blazewicz, Marta Szachniuk, Agnieszka Rybarczyk, 2014, RNA biology.

Automated 3D structure composition for large RNAs

Jacek Blazewicz, Marta Szachniuk, Maciej Antczak, 2012, Nucleic acids research.

Discovering Structural Motifs in miRNA Precursors from the Viridiplantae Kingdom

Marta Szachniuk, Joanna Miskiewicz, M. Szachniuk, 2018, Molecules.