Sten Linnarsson

发表

SAMstrt: statistical test for differential expression in single-cell transcriptome with spike-in normalization

Shintaro Katayama, Juha Kere, Virpi Töhönen, 2013, Bioinform..

STRT-seq-2i: dual-index 5ʹ single cell and nucleus RNA-seq on an addressable microwell array

Rebecca Hodge, Syed Husain, Jaromir Mikes, 2017, bioRxiv.

RNA velocity of single cells

Erik Sundström, Zehua Liu, Viktor Petukhov, 2018, Nature.

Population-scale testing can suppress the spread of infectious disease

Ioannis Kontoyiannis, Jussi Taipale, Sten Linnarsson, 2021, 2104.06857.

Base Preferences in Non-Templated Nucleotide Incorporation by MMLV-Derived Reverse Transcriptases

Pawel Zajac, Sten Linnarsson, Peter Lönnerberg, 2013, PloS one.

Topographical transcriptome mapping of the mouse medial ganglionic eminence by spatially resolved RNA-seq

Pawel Zajac, Sten Linnarsson, Peter Lönnerberg, 2014, Genome Biology.

Classes and continua of hippocampal CA1 inhibitory neurons revealed by single-cell transcriptomics

Kenneth D Harris, Jens Hjerling-Leffler, Peter Somogyi, 2017, bioRxiv.

Counting absolute number of molecules using unique molecular identifiers

Jussi Taipale, Sten Linnarsson, Anna Vähärautio, 2011 .

Molecular architecture of the mouse nervous system

Kenneth D. Harris, Gioele La Manno, Ernest Arenas, 2018 .

The promise of spatial transcriptomics for neuroscience in the era of molecular cell typing

Lars E. Borm, Ed Lein, Sten Linnarsson, 2017, Science.

Highly multiplexed and strand-specific single-cell RNA 5′ end sequencing

Pawel Zajac, Jian-Bing Fan, Sten Linnarsson, 2012, Nature Protocols.

A secretagogin locus of the mammalian hypothalamus controls stress hormone release

Mathias Uhlen, Miklós Palkovits, Sally L Shirran, 2015, The EMBO journal.

Genetic identification of brain cell types underlying schizophrenia

Gerome Breen, Trygve E Bakken, Rebecca D Hodge, 2017, Nature Genetics.

Evolution of cellular diversity in primary motor cortex of human, marmoset monkey, and mouse

Christof Koch, Brian D. Aevermann, Richard H. Scheuermann, 2020, bioRxiv.

Integration of electrophysiological recordings with single-cell RNA-seq data identifies novel neuronal subtypes

Yuchio Yanagawa, Gábor Szabó, Sten Linnarsson, 2015, Nature Biotechnology.

Oligodendrocyte heterogeneity in the mouse juvenile and adult central nervous system

Jens Hjerling-Leffler, William D. Richardson, Gioele La Manno, 2016, Science.

Molecular interrogation of hypothalamic organization reveals distinct dopamine neuronal subtypes

Yuchio Yanagawa, Karl Deisseroth, Christoph Bock, 2016, Nature Neuroscience.

Corrigendum: Characterization and target genes of nine human PRD-like homeobox domain genes expressed exclusively in early embryos

Kaarel Krjutškov, Robert Månsson, Juha Kere, 2016, Scientific reports.

Neuronal atlas of the dorsal horn defines its architecture and links sensory input to transcriptional cell types

Ole Kiehn, Gioele La Manno, Sten Linnarsson, 2018, Nature Neuroscience.

Diversity of Interneurons in the Dorsal Striatum Revealed by Single-Cell RNA Sequencing and PatchSeq

Kenneth D. Harris, Jens Hjerling-Leffler, Hermany Munguba, 2018, Cell reports.

Alternative TSSs are co‐regulated in single cells in the mouse brain

Sten Linnarsson, Peter Lönnerberg, S. Linnarsson, 2017, Molecular systems biology.

Single-Cell RNA-Seq Reveals Lineage and X Chromosome Dynamics in Human Preimplantation Embryos

Rickard Sandberg, Björn Reinius, Fredrik Lanner, 2016, Cell.

The Human Cell Atlas White Paper

Roland Eils, Hans Clevers, Mary Carmichael, 2018, 1810.05192.

A PBX1 transcriptional network controls dopaminergic neuron development and is impaired in Parkinson's disease

Tomas Bergman, Ernest Arenas, Anna Falk, 2016, The EMBO journal.

A comparative strategy for single-nucleus and single-cell transcriptomes confirms accuracy in predicted cell-type expression from nuclear RNA

Kun Zhang, Peter V Kharchenko, Sten Linnarsson, 2017, Scientific Reports.

The Human Cell Atlas

Roland Eils, Alexander van Oudenaarden, Hans Clevers, 2017, bioRxiv.

Rapid genome sequencing with short universal tiling probes

Ellef Hersoug, Sten Linnarsson, Peter Lönnerberg, 2008, Nature Biotechnology.

Single-cell mRNA isoform diversity in the mouse brain

Sten Linnarsson, S. Linnarsson, Kasper Karlsson, 2017, BMC Genomics.

Single-Cell Transcriptomics Reveals that Differentiation and Spatial Signatures Shape Epidermal and Hair Follicle Heterogeneity

Maria Kasper, Gioele La Manno, Sten Linnarsson, 2016, Cell systems.