Allen D. Delaney

发表

Assessment of algorithms for high throughput detection of genomic copy number variation in oligonucleotide microarray data

Marco A. Marra, Hong Qian, Giulia C. Kennedy, 2007, BMC Bioinformatics.

Sequence biases in large scale gene expression profiling data

Obi L. Griffith, Marco A. Marra, Asim S. Siddiqui, 2006, Nucleic acids research.

Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells.

Ryan D. Morin, Allen D. Delaney, M. Marra, 2008, Genome research.

Genome-wide profiles of STAT1 DNA association using chromatin immunoprecipitation and massively parallel sequencing

Allen D. Delaney, Steven J. M. Jones, O. Griffith, 2007, Nature Methods.

Conserved Role of Intragenic DNA Methylation in Regulating Alternative Promoters

Allen D. Delaney, D. Haussler, M. Marra, 2010, Nature.

Frequent mutation of histone modifying genes in non-Hodgkin lymphoma

Steven J. M. Jones, Shaun D. Jackman, Ryan D. Morin, 2011, Nature.

ARID1A mutations in endometriosis-associated ovarian carcinomas.

Richard A. Moore, Allen D. Delaney, S. Fereday, 2010, The New England journal of medicine.

Mutational evolution in a lobular breast tumour profiled at single nucleotide resolution

Ryan D. Morin, Richard A. Moore, Trevor J Pugh, 2009, Nature.

In-depth characterization of the microRNA transcriptome in a leukemia progression model.

Malachi Griffith, Thomas Zeng, Ryan D. Morin, 2008, Genome research.

A Male with Unilateral Microphthalmia Reveals a Role for TMX3 in Eye Development

Allen D. Delaney, H. Baier, P. Kwok, 2010, PloS one.

Alternative expression analysis by RNA sequencing

Steven J. M. Jones, Ryan D. Morin, Trevor J Pugh, 2010, Nature Methods.

Tumor-associated macrophages and survival in classic Hodgkin's lymphoma.

Steven J. M. Jones, Christian Steidl, Javeed Iqbal, 2010, The New England journal of medicine.

Comparison of sequencing-based methods to profile DNA methylation and identification of monoallelic epigenetic modifications

Michael Q. Zhang, Haussler, Allen D. Delaney, 2010, Nature Biotechnology.

LNCaP Atlas: Gene expression associated with in vivo progression to castration-recurrent prostate cancer

Allen D. Delaney, G. Wang, M. Marra, 2010, BMC Medical Genomics.

Prospective isolation and molecular characterization of hematopoietic stem cells with durable self-renewal potential.

Allen D. Delaney, M. Marra, D. Kent, 2009, Blood.

A mouse atlas of gene expression: large-scale digital gene-expression profiles from precisely defined developing C57BL/6J mouse tissues and cells.

Sarah Barber, Steven J. M. Jones, Richard Varhol, 2005, Proceedings of the National Academy of Sciences of the United States of America.

Transcriptome analysis of the normal human mammary cell commitment and differentiation process.

Marco Marra, Steven McKinney, Samuel Aparicio, 2008, Cell stem cell.

Somatic mutation of EZH2 (Y641) in Follicular and Diffuse Large B-cell Lymphomas of Germinal Center Origin

Ryan D. Morin, Richard A. Moore, Allen D. Delaney, 2010, Nature Genetics.

Comprehensive microRNA expression profiling of the hematopoietic hierarchy

Allen D. Delaney, M. Marra, D. Kent, 2010, Proceedings of the National Academy of Sciences.

A maternally inherited chromosome 18q22.1 deletion in a male with late‐presenting diaphragmatic hernia and microphthalmia–evaluation of DSEL as a candidate gene for the diaphragmatic defect

Allen D. Delaney, G. Shaw, A. Delaney, 2010, American journal of medical genetics. Part A.

Epigenetic and transcriptional determinants of the human breast

Malachi Griffith, Michael T. McManus, Martin Hirst, 2015, Nature Communications.

Retinoblastoma-binding proteins 4 and 9 are important for human pluripotent stem cell maintenance.

Elizabeth D. Wederell, Allen D. Delaney, M. Marra, 2011, Experimental hematology.

LongSAGE profiling of nine human embryonic stem cell lines

Steven J. M. Jones, Ryan D. Morin, Allen D. Delaney, 2007, Genome Biology.

Novel deletions of 14q11.2 associated with developmental delay, cognitive impairment and similar minor anomalies in three children

Jan M Friedman, Lionel Willatt, Howard Martin, 2007, Journal of Medical Genetics.

Next-generation tag sequencing for cancer gene expression profiling.

Ryan D. Morin, Allen D. Delaney, M. Marra, 2009, Genome research.

Large-scale production of SAGE libraries from microdissected tissues, flow-sorted cells, and cell lines.

Allen D. Delaney, M. Marra, M. Hirst, 2006, Genome research.

Tag‐Seq: Next‐Generation Tag Sequencing for Gene Expression Profiling

Allen D. Delaney, M. Marra, M. Hirst, 2012 .

Mutation Discovery in Regions of Segmental Cancer Genome Amplifications with CoNAn-SNV: A Mixture Model for Next Generation Sequencing of Tumors

Allen D. Delaney, M. Marra, M. Hirst, 2012, PloS one.

Molecular cloning of the cDNA and chromosomal localization of the gene for a putative seven-transmembrane segment (7-TMS) receptor isolated from human spleen.

Allen D. Delaney, A. Delaney, K. Schappert, 1993, Genomics.

Detection of pathogenic copy number variants in children with idiopathic intellectual disability using 500 K SNP array genomic hybridization

Allen D. Delaney, M. Marra, A. Delaney, 2009, BMC Genomics.

Oligonucleotide microarray analysis of genomic imbalance in children with mental retardation.

Sarah Barber, Steven J. M. Jones, Martin Krzywinski, 2006, American journal of human genetics.

High resolution analysis of follicular lymphoma genomes reveals somatic recurrent sites of copy‐neutral loss of heterozygosity and copy number alterations that target single genes

Allen D. Delaney, R. Gascoyne, J. Connors, 2010, Genes, chromosomes & cancer.

Global analysis of in vivo Foxa2-binding sites in mouse adult liver using massively parallel sequencing

Thomas Zeng, Richard Varhol, Martin Hirst, 2008, Nucleic acids research.

Sequence Variant Discovery in DNA Repair Genes from Radiosensitive and Radiotolerant Prostate Brachytherapy Patients

Richard A. Moore, Trevor J Pugh, Allen D. Delaney, 2009, Clinical Cancer Research.