M. S. Chapman

发表

M. S. Chapman, 1994, Comput. Appl. Biosci..

Fitting of high-resolution structures into electron microscopy reconstruction images.

M. S. Chapman, F. Fabiola, 2005, Structure.

Study of the Structural Dynamics of the E. coli 70S Ribosome Using Real-Space Refinement

M. S. Chapman, A. Sali, S. Harvey, 2003, Cell.

Real space refinement of acto-myosin structures from sectioned muscle.

M. S. Chapman, L. F. Chen, E. Blanc, 2001, Journal of structural biology.

ResLog plots as an empirical metric of the quality of cryo-EM reconstructions.

Michael S. Spilman, M. S. Chapman, S. Stagg, 2014, Journal of structural biology.

An improved hydrogen bond potential: Impact on medium resolution protein structures

Richard Bertram, Andrei Korostelev, Michael S Chapman, 2002, Protein science : a publication of the Protein Society.

Structure of adeno-associated virus-2 in complex with neutralizing monoclonal antibody A20.

M. S. Chapman, S. Stagg, K. Taylor, 2012, Virology.

Characterization of the Capsid Protein Glycosylation of Adeno-Associated Virus Type 2 by High-Resolution Mass Spectrometry

M. S. Chapman, M. Emmett, A. Korostelev, 2006, Journal of Virology.

Adeno-associated Virus Receptor-binding: Flexible Domains and Alternative Conformations through cryo-Electron Tomography of AAV2 and AAV5 complexes

M. S. Chapman, S. Stagg, G. Hu, 2022, bioRxiv.

Adeno-associated virus-2 and its primary cellular receptor--Cryo-EM structure of a heparin complex.

M. S. Chapman, K. Taylor, J. O'Donnell, 2009, Virology.

The structure of adeno-associated virus serotype 3B (AAV-3B): insights into receptor binding and immune evasion.

M. S. Chapman, T. F. Lerch, Q. Xie, 2010, Virology.

An essential receptor for adeno-associated virus infection

M. S. Chapman, J. Carette, Y. Ishikawa, 2015, Nature.

Adeno-associated Virus (AAV) Serotypes Have Distinctive Interactions with Domains of the Cellular AAV Receptor

M. S. Chapman, J. Carette, O. Davulcu, 2017, Journal of Virology.

Tertiary structure of plant RuBisCO: domains and their contacts.

M S Chapman, M. S. Chapman, D. Eisenberg, 1988, Science.

Crystal structure of human rhinovirus serotype 1A (HRV1A).

M S Chapman, M A McKinlay, M. S. Chapman, 1989, Journal of molecular biology.

A comparison of the anti-rhinoviral drug binding pocket in HRV14 and HRV1A.

M S Chapman, M G Rossmann, M. S. Chapman, 1994, Journal of molecular biology.

Atomic modeling of cryo-electron microscopy reconstructions--joint refinement of model and imaging parameters.

Michael S Chapman, M. S. Chapman, A. Trzynka, 2013, Journal of structural biology.

The three-dimensional structure of canine parvovirus and its functional implications.

M S Chapman, M G Rossmann, M. S. Chapman, 1991, Science.

Structure of AAV-DJ, a retargeted gene therapy vector: cryo-electron microscopy at 4.5 Å resolution.

M. S. Chapman, S. Stagg, K. Taylor, 2012, Structure.

Bias in cross-validated free R factors: mitigation of the effects of non-crystallographic symmetry.

M. S. Chapman, F. Fabiola, A. Korostelev, 2006, Acta crystallographica. Section D, Biological crystallography.

Induced fit in arginine kinase.

M S Chapman, M. S. Chapman, W. Ellington, 2000, Biophysical journal.

Impact of a Poisson-Boltzmann electrostatic restraint on protein structures refined at medium resolution.

M. S. Chapman, A. Korostelev, M. O. Fenley, 2004, Acta crystallographica. Section D, Biological crystallography.

The 2.8 Å Electron Microscopy Structure of Adeno-Associated Virus-DJ Bound by a Heparinoid Pentasaccharide

M. S. Chapman, S. Stagg, D. Sousa, 2017, Molecular therapy. Methods & clinical development.

A pseudo-plaque method for infectious particle assay and clonal isolation of adeno-associated virus.

M. S. Chapman, J. Hare, T. F. Lerch, 2010, Journal of virological methods.

Structure, sequence, and function correlations among parvoviruses.

M. S. Chapman, M. Rossmann, Michael G. Rossmann, 1993, Virology.

The active site cysteine of arginine kinase: structural and functional analysis of partially active mutants.

M. S. Chapman, W. Ellington, M. O. Fenley, 2004, Biochemistry.

A crystal form of ribulose-1,5-bisphosphate carboxylase/oxygenase from Nicotiana tabacum in the activated state.

M. S. Chapman, D. Eisenberg, S. Suh, 1987, Journal of molecular biology.

Characterization of interactions between heparin/glycosaminoglycan and adeno-associated virus.

M. S. Chapman, R. Linhardt, O. Davulcu, 2013, Biochemistry.

Cryo-electron Microscopy of Adeno-associated Virus

M. S. Chapman, S. Stagg, O. Davulcu, 2022, Chemical reviews.

Structure determination of adeno-associated virus 2: three complete virus particles per asymmetric unit.

M. S. Chapman, T. Somasundaram, Q. Xie, 2003, Acta crystallographica. Section D, Biological crystallography.

The Structure of Lombricine Kinase

M. S. Chapman, F. Fabiola, O. Kirillova, 2011, The Journal of Biological Chemistry.

Adeno-Associated Virus Receptor-Binding: Flexible Domains and Alternative Conformations through Cryo-Electron Tomography of Adeno-Associated Virus 2 (AAV2) and AAV5 Complexes

M. S. Chapman, S. Stagg, G. Hu, 2022, Journal of virology.

Corrigendum: An essential receptor for adeno-associated virus infection

M. S. Chapman, J. Carette, Y. Ishikawa, 2016, Nature.

Expression, purification from inclusion bodies, and crystal characterization of a transition state analog complex of arginine kinase: A model for studying phosphagen kinases

M. S. Chapman, W. Ellington, T. Somasundaram, 1997, Protein science : a publication of the Protein Society.

Crystallization and preliminary X-ray structural studies of adeno-associated virus serotype 6.

M. S. Chapman, J. Hare, Heather M Ongley, 2008, Acta crystallographica. Section F, Structural biology and crystallization communications.

Crystal structures of wild-type and mutated cyclophilin B that causes hyperelastosis cutis in the American quarter horse

M. S. Chapman, Y. Ishikawa, J. Nix, 2012, BMC Research Notes.

The role of phosphagen specificity loops in arginine kinase

M. S. Chapman, W. Ellington, A. Azzi, 2004, Protein science : a publication of the Protein Society.

The Putative Catalytic Bases Have, at Most, an Accessory Role in the Mechanism of Arginine Kinase*

M. S. Chapman, P. Pruett, W. Ellington, 2003, Journal of Biological Chemistry.

Anomeric effect in "high energy" phosphate bonds. Selective destabilization of the scissile bond and modulation of the exothermicity of hydrolysis.

Joshua A. Plumley, M. S. Chapman, J. Evanseck, 2008, Journal of the American Chemical Society.

Crystal structure of the human collagen XV trimerization domain: a potent trimerizing unit common to multiplexin collagens.

M. S. Chapman, H. Bächinger, T. F. Lerch, 2010, Matrix biology : journal of the International Society for Matrix Biology.

Subunit dissociation and metal binding by Escherichia coli apo-manganese superoxide dismutase.

J. W. Whittaker, M. S. Chapman, O. Kirillova, 2011, Archives of biochemistry and biophysics.

Atomic structure of viral particles

M. S. Chapman, M. Agbandje-McKenna, 2005 .

Crystal structures of wild-type and mutated cyclophilin B that causes hyperelastosis cutis in the American quarter horse

M. S. Chapman, Y. Ishikawa, J. Nix, 2012, BMC Research Notes.

Transition state structure of arginine kinase: implications for catalysis of bimolecular reactions.

M. S. Chapman, E. Blanc, W. Ellington, 1998, Proceedings of the National Academy of Sciences of the United States of America.

Modelling of the human intercellular adhesion molecule‐1, the human rhinovirus major group receptor

M S Chapman, M G Rossmann, M. S. Chapman, 1990, Proteins.

The influence of frame alignment with dose compensation on the quality of single particle reconstructions.

Scott M Stagg, Alex J Noble, Michael S Chapman, 2015, Journal of structural biology.

Crystal structure of human collagen XVIII trimerization domain: A novel collagen trimerization Fold.

Michael S Chapman, M. S. Chapman, Takako Sasaki, 2009, Journal of molecular biology.

Structure of human peptidyl‐prolyl cis–trans isomerase FKBP22 containing two EF‐hand motifs

M. S. Chapman, Y. Ishikawa, J. Nix, 2014, Protein science : a publication of the Protein Society.

Large-scale production, purification and crystallization of wild-type adeno-associated virus-2.

M. S. Chapman, J. Hare, Q. Xie, 2004, Journal of virological methods.

Some evolutionary relationships of the primary biological catalysts glutamine synthetase and RuBisCO.

M. S. Chapman, D. Eisenberg, C. Janson, 1987, Cold Spring Harbor symposia on quantitative biology.

Hyperconjugation-mediated solvent effects in phosphoanhydride bonds.

M. S. Chapman, J. Evanseck, Jean C. Summerton, 2012, The journal of physical chemistry. A.

Structural folds of viral proteins.

Lars Liljas, Michael S Chapman, M. S. Chapman, 2003, Advances in protein chemistry.

Induced fit in guanidino kinases—comparison of substrate‐free and transition state analog structures of arginine kinase

M. S. Chapman, W. Ellington, T. Somasundaram, 2003, Protein science : a publication of the Protein Society.

Structure-function analysis of receptor-binding in adeno-associated virus serotype 6 (AAV-6).

M. S. Chapman, N. Meyer, T. F. Lerch, 2011, Virology.

Structure of the gene therapy vector, adeno-associated virus with its cell receptor, AAVR

M. S. Chapman, S. Stagg, A. Noble, 2019, eLife.

Electron microscopy analysis of a disaccharide analog complex reveals receptor interactions of adeno-associated virus.

Michael S. Spilman, M. S. Chapman, S. Stagg, 2013, Journal of structural biology.

Restrained real-space macromolecular atomic refinement using a new resolution-dependent electron-density function

Michael S. Chapman, M. S. Chapman, 1995 .

Low-resolution structure refinement in electron microscopy.

Nikolaus Grigorieff, Michael S Chapman, M. S. Chapman, 2003, Journal of structural biology.

Conformational disorder of proteins assessed by real-space molecular dynamics refinement.

M. S. Chapman, Z. Chen, 2001, Biophysical journal.

Real-space molecular-dynamics structure refinement.

Z Chen, E Blanc, M S Chapman, 1999, Acta crystallographica. Section D, Biological crystallography.

Adeno-Associated Virus (AAV) Gene Delivery: Dissecting Molecular Interactions upon Cell Entry

M. S. Chapman, M. Silveria, G. Zane, 2021, Viruses.

Critical initial real-space refinement in the structure determination of arginine kinase.

M. S. Chapman, E. Blanc, T. Somasundaram, 1999, Acta crystallographica. Section D, Biological crystallography.

Adeno-associated Virus (AAV) Assembly-Activating Protein Is Not an Essential Requirement for Capsid Assembly of AAV Serotypes 4, 5, and 11

M. S. Chapman, H. Nakai, N. Meyer, 2016, Journal of Virology.

Correlating structure with function in the viral capsid

M. S. Chapman, M. Agbandje-McKenna, 2005 .

The atomic structure of adeno-associated virus (AAV-2), a vector for human gene therapy

M. S. Chapman, J. Hare, T. Somasundaram, 2002, Proceedings of the National Academy of Sciences of the United States of America.

Mapping the surface properties of macromolecules

M S Chapman, M. S. Chapman, 1993, Protein science : a publication of the Protein Society.

Elevated μs-ms timescale backbone dynamics in the transition state analog form of arginine kinase.

M. S. Chapman, R. Brüschweiler, O. Davulcu, 2017, Journal of structural biology.

Rate-limiting domain and loop motions in arginine kinase.

M. S. Chapman, O. Davulcu, J. Skalicky, 2011, Biochemistry.

Intrinsic domain and loop dynamics commensurate with catalytic turnover in an induced-fit enzyme.

M. S. Chapman, O. Davulcu, J. Skalicky, 2009, Structure.

Adeno-associated virus receptor complexes and implications for adeno-associated virus immune neutralization

M. S. Chapman, E. Large, 2023, Frontiers in Microbiology.

Identification of the heparin binding site on adeno-associated virus serotype 3B (AAV-3B).

M. S. Chapman, T. F. Lerch, 2012, Virology.

Human rhinovirus 14 complexed with antiviral compound R 61837.

M S Chapman, M G Rossmann, M. S. Chapman, 1991, Journal of molecular biology.

Mathematical aspects of protein structure determination with NMR orientational restraints

Richard Bertram, Michael S Chapman, M. S. Chapman, 2004, Bulletin of mathematical biology.

Improved free R factors for cross-validation of macromolecular structure - importance for real-space refinement.

M. S. Chapman, E. Blanc, Z. Chen, 1999, Acta crystallographica. Section D, Biological crystallography.

Single-stranded DNA-protein interactions in canine parvovirus.

M. S. Chapman, M. Rossmann, 1995, Structure.

Structural studies of Rubisco from tobacco.

M S Chapman, D Eisenberg, M. S. Chapman, 1986, Philosophical transactions of the Royal Society of London. Series B, Biological sciences.

The Michaelis Complex of Arginine Kinase Samples the Transition State at a Frequency That Matches the Catalytic Rate.

M. S. Chapman, R. Brüschweiler, L. Bruschweiler‐Li, 2017, Journal of the American Chemical Society.

Refinement of the arginine kinase transition-state analogue complex at 1.2 A resolution: mechanistic insights.

M. S. Chapman, F. Fabiola, T. Somasundaram, 2002, Acta crystallographica. Section D, Biological crystallography.

The Sampling of Conformational Dynamics in Ambient-Temperature Crystal Structures of Arginine Kinase.

M. S. Chapman, R. Brüschweiler, J. Nix, 2016, Structure.

Arginine kinase: joint crystallographic and NMR RDC analyses link substrate-associated motions to intrinsic flexibility.

Rafael Brüschweiler, Michael S Chapman, M. S. Chapman, 2011, Journal of molecular biology.

Adeno-Associated Virus (AAV-DJ)—Cryo-EM Structure at 1.56 Å Resolution

M. S. Chapman, C. Yoshioka, Q. Xie, 2020, Viruses.

Cryo-EM structure of adeno-associated virus 4 at 2.2 Å resolution

M. S. Chapman, T. White, M. Silveria, 2022, bioRxiv.

Polylysine Induces an Antiparallel Actin Dimer That Nucleates Filament Assembly

Steven C Almo, Michael S Chapman, Robert McKenna, 2002, The Journal of Biological Chemistry.

Chapter 3 THE STRUCTURAL ENZYMOLOGY OF ARGININE KINASE AND ITS IMPLICATIONS FOR CREATINE KINASE

M. S. Chapman, 2006 .

Elongation arrest by SecM via a cascade of ribosomal RNA rearrangements.

Joachim Frank, Christiane Schaffitzel, Michael S Chapman, 2006, Molecular cell.

Sliding-layer conformational change limited by the quaternary structure of plant RuBisCO

M. S. Chapman, D. Eisenberg, S. Suh, 1987, Nature.

Watching one's P's and Q's: promiscuity, plasticity, and quasiequivalence in a T = 1 virus.

M. S. Chapman, 1998, Biophysical journal.

Serotype-specific detection of adeno-associated virus during laboratory preparation.

M. S. Chapman, J. O'Donnell, J. Hare, 2006, Journal of virological methods.

Expression and Purification of Adeno-associated Virus Virus-like Particles in a Baculovirus System and AAVR Ectodomain Constructs in E. coli.

M. S. Chapman, O. Davulcu, M. Silveria, 2020, Bio-protocol.

Real-Space Refinement Using RSRef

Zhi Chen, Michael S. Chapman, Eric Blanc, 1998 .

Common Hydrogen Bond Interactions in Diverse Phosphoryl Transfer Active Sites

M. S. Chapman, J. Evanseck, G. M. Martin, 2014, PloS one.

Use of Non-Crystallographic Symmetry for Ab Initio Phasing of Virus Structures

John E. Johnson, M. S. Chapman, M. Rossmann, 1998 .

Introduction To the Use of Non-Crystallographic Symmetry in Phasing

Michael S. Chapman, M. S. Chapman, 1998 .

RSREF: interactive real-space refinement with stereochemical restraints for use during model-building

Eric Blanc, Michael S. Chapman, M. S. Chapman, 1997 .

Cross-Species Permissivity: Structure of a Goat Adeno-Associated Virus and Its Complex with the Human Receptor AAVR

M. S. Chapman, T. White, M. Silveria, 2022, bioRxiv.

The Structure of an AAV5-AAVR Complex at 2.5 Å Resolution: Implications for Cellular Entry and Immune Neutralization of AAV Gene Therapy Vectors

M. S. Chapman, T. White, M. Silveria, 2020, Viruses.

Adeno-associated virus (AAV) cell entry: structural insights.

M. S. Chapman, N. Meyer, 2021, Trends in microbiology.

Structural Studies of Rubisco from Tobacco [ and Discussion ]

M. S. Chapman, R. Pickersgill, D. Eisenberg, 2007 .

De-icing: recovery of diffraction intensities in the presence of ice rings.

Michael S Chapman, M. S. Chapman, T. Somasundaram, 2010, Acta crystallographica. Section D, Biological crystallography.

Parsimony in Protein Conformational Change.

M. S. Chapman, R. Brüschweiler, O. Davulcu, 2015, Structure.

Twinned crystals of adeno-associated virus serotype 3b prove suitable for structural studies.

M. S. Chapman, J. Hare, Heather M Ongley, 2009, Acta crystallographica. Section F, Structural biology and crystallization communications.

pipath: An optimized algorithm for generating α-helical structures from PISEMA data

M. S. Chapman, R. Bertram, T. Cross, 2006 .

Intensity and mosaic spread analysis from PISEMA tensors in solid-state NMR.

M. S. Chapman, R. Bertram, T. Cross, 2006, Journal of magnetic resonance.

PIPATH: an optimized algorithm for generating alpha-helical structures from PISEMA data.

M. S. Chapman, R. Bertram, T. Cross, 2006, Journal of magnetic resonance.

Atomic refinement with correlated solid-state NMR restraints.

M. S. Chapman, R. Bertram, F. Fabiola, 2003, Journal of magnetic resonance.

Atomic refinement using orientational restraints from solid-state NMR.

M. S. Chapman, R. Bertram, T. Cross, 2000, Journal of magnetic resonance.

Simulated-annealing real-space refinement as a tool in model building.

Richard Bertram, Andrei Korostelev, Michael S Chapman, 2002, Acta crystallographica. Section D, Biological crystallography.

37. Capacity of Viral Genome Packaging and Internal Volumes of AAV Viral Particles

M. S. Chapman, H. Nakai, K. Adachi, 2015 .

Comparison of surface properties of picornaviruses: strategies for hiding the receptor site from immune surveillance.

M S Chapman, M G Rossmann, M. S. Chapman, 1993, Virology.

Crystal structure of human collagen XVIII trimerization domain: A novel collagen trimerization Fold.

M. S. Chapman, Takako Sasaki, J. Engel, 2009, Journal of molecular biology.

ResLog plots as an empirical metric of the quality of cryo-EM reconstructions.

Michael S. Spilman, M. S. Chapman, S. Stagg, 2014, Journal of structural biology.

Arginine kinase: joint crystallographic and NMR RDC analyses link substrate-associated motions to intrinsic flexibility.

M. S. Chapman, R. Brüschweiler, O. Davulcu, 2011, Journal of molecular biology.

Characterization of interactions between heparin/glycosaminoglycan and adeno-associated virus.

M. S. Chapman, R. Linhardt, O. Davulcu, 2013, Biochemistry.

Canine parvovirus capsid structure, analyzed at 2.9 A resolution.

M. S. Chapman, Q. Xie, 1996, Journal of molecular biology.

Generalized anomeric interpretation of the "high-energy" N-P bond in N-methyl-N'-phosphorylguanidine: importance of reinforcing stereoelectronic effects in "high-energy" phosphoester bonds.

M. S. Chapman, J. Evanseck, E. Ruben, 2005, Journal of the American Chemical Society.