Benjamin D. Madej

AMPL: A Data-Driven Modeling Pipeline for Drug Discovery

Bharath Ramsundar, Jonathan E. Allen, Neha Murad, 2019, J. Chem. Inf. Model..

Lipid14: The Amber Lipid Force Field

Benjamin D. Madej, Callum J. Dickson, I. Gould, 2014, Journal of chemical theory and computation.

LIPID11: a modular framework for lipid simulations using amber.

Knut Teigen, Ross C Walker, Benjamin D. Madej, 2012, The journal of physical chemistry. B.

Amber 2015, University of California, San Francisco

Holger Gohlke, Ray Luo, Adrian E. Roitberg, 2015 .

Simulation of lipid bilayer self-assembly using all-atom lipid force fields.

Benjamin D. Madej, Callum J. Dickson, I. Gould, 2016, Physical chemistry chemical physics : PCCP.

A Parameterization of Cholesterol for Mixed Lipid Bilayer Simulation within the Amber Lipid14 Force Field.

Benjamin D. Madej, I. Gould, R. Walker, 2015, The journal of physical chemistry. B.

Accelerating Therapeutics for Opportunities in Medicine: A Paradigm Shift in Drug Discovery

Eric A. Stahlberg, Izumi V. Hinkson, Benjamin Madej, 2020, Frontiers in Pharmacology.

All-atom lipid bilayer self-assembly with the AMBER and CHARMM lipid force fields.

Benjamin D. Madej, Callum J. Dickson, I. Gould, 2015, Chemical communications.

Predicting Volume of Distribution in Humans: Performance of In Silico Methods for a Large Set of Structurally Diverse Clinical Compounds

Amanda J. Minnich, Benjamin D. Madej, J. Polli, 2020, Drug Metabolism and Disposition.