Arthur J. Olson

发表

Network-based Rendering Techniques for Large-scale Volume Data Sets

Bernd Hamann, Joerg Meyer, Ragnar Borg, 2003 .

Robust Scoring Functions for Protein-Ligand Interactions with Quantum Chemical Charge Models

Arthur J. Olson, Jung-Hsin Lin, Chung-Ming Chen, 2011, J. Chem. Inf. Model..

Instant Construction and Visualization of Crowded Biological Environments

David S. Goodsell, Ivan Viola, Arthur J. Olson, 2018, IEEE Transactions on Visualization and Computer Graphics.

Labels on Levels: Labeling of Multi-Scale Multi-Instance and Crowded 3D Biological Environments

David S. Goodsell, Ivan Viola, Arthur J. Olson, 2018, IEEE Transactions on Visualization and Computer Graphics.

uPy: A Ubiquitous CG Python API with Biological-Modeling Applications

Michel F. Sanner, Arthur J. Olson, Ludovic Autin, 2012, IEEE Computer Graphics and Applications.

Role of haptics in teaching structural molecular biology

Michel F. Sanner, Arthur J. Olson, Suzanne Weghorst, 2003, 11th Symposium on Haptic Interfaces for Virtual Environment and Teleoperator Systems, 2003. HAPTICS 2003. Proceedings..

Lattice modeling: Accuracy of energy calculations

Michel F. Sanner, Arthur J. Olson, Alexei V. Finkelstein, 1996, J. Comput. Chem..

Rendering of volumetric data in biological systems

David S. Goodsell, Arthur J. Olson, D. Goodsell, 1990, Photonics West - Lasers and Applications in Science and Engineering.

Cooperative programming in crich ystallography

Arthur J. Olson, George N. Reeke, Stephan T. Freer, 1983, Comput. Chem..

Visual Analytics for Biological Data

Arthur J. Olson, Raghu Machiraju, Carsten Görg, 2014, IEEE Computer Graphics and Applications.

AutoDockFR: Advances in Protein-Ligand Docking with Explicitly Specified Binding Site Flexibility

David S. Goodsell, Michel F. Sanner, Arthur J. Olson, 2015, PLoS Comput. Biol..

Constructing Lattice Models of Protein Chains with Side Groups

Arthur J. Olson, Alexei V. Finkelstein, Boris A. Reva, 1995, J. Comput. Biol..

Applications of Evolutionary Programming for the Prediction of Protein-Protein Interactions

Arthur J. Olson, Bruce S. Duncan, A. Olson, 1996, Evolutionary Programming.

Blind prediction of HIV integrase binding from the SAMPL4 challenge

Shuai Liu, Arthur J. Olson, Alex L. Perryman, 2014, Journal of Computer-Aided Molecular Design.

Computer-linked autofabricated 3D models for teaching structural biology

David S. Goodsell, Michel F. Sanner, Arthur J. Olson, 2004, SIGGRAPH '04.

Virtual screening of integrase inhibitors by large scale binding free energy calculations: the SAMPL4 challenge

Arthur J. Olson, Lauren Wickstrom, Alex L. Perryman, 2014, Journal of Computer-Aided Molecular Design.

Protein Flexibility in Virtual Screening: The BACE-1 Case Study

David S. Goodsell, Arthur J. Olson, Ettore Novellino, 2012, J. Chem. Inf. Model..

Automated docking using a Lamarckian genetic algorithm and an empirical binding free energy function

David S. Goodsell, Arthur J. Olson, William E. Hart, 1998 .

Tangible augmented interfaces for structural molecular biology

Michel F. Sanner, Arthur J. Olson, Alexandre Gillet, 2005, IEEE Computer Graphics and Applications.

Segmentation and 3D visualization of high-resolution human brain cryosections

Bernd Hamann, Kwan-Liu Ma, Arthur J. Olson, 2002, IS&T/SPIE Electronic Imaging.

Fast and robust computation of molecular surfaces

Jean-Claude Spehner, Michel F. Sanner, Arthur J. Olson, 1995, SCG '95.

Molecular illustration

David S. Goodsell, Arthur J. Olson, 1991 .

Challenges session

Arthur J. Olson, Cydney B. Nielsen, Willy Supatto, 2011 .

Integrating Computation and Visualization for Biomolecular Analysis: An Example Using Python and AVS

Michel F. Sanner, Arthur J. Olson, C. J. Carrillo, 1998, Pacific Symposium on Biocomputing.

Rendering volumetric data in molecular systems

David S. Goodsell, Arthur J. Olson, Is Mian, 1989 .

Computational Coevolution of Antiviral Drug Resistance

David S. Goodsell, Arthur J. Olson, Garrett M. Morris, 1997, Artificial Life.

AutoDock4 and AutoDockTools4: Automated docking with selective receptor flexibility

David S. Goodsell, Michel F. Sanner, Arthur J. Olson, 2009, J. Comput. Chem..

CellPAINT: Interactive Illustration of Dynamic Mesoscale Cellular Environments

David S. Goodsell, Arthur J. Olson, Ludovic Autin, 2018, IEEE Computer Graphics and Applications.

AutoDock4Zn: An Improved AutoDock Force Field for Small-Molecule Docking to Zinc Metalloproteins

Arthur J. Olson, Maria João Ramos, Diogo Santos-Martins, 2014, J. Chem. Inf. Model..

Automated Docking with Protein Flexibility in the Design of Femtomolar "Click Chemistry" Inhibitors of Acetylcholinesterase

Arthur J. Olson, Garrett M. Morris, Palmer Taylor, 2013, J. Chem. Inf. Model..

3D Printing of Molecular Models

Arthur J. Olson, Adam Gardner, A. Olson, 2016, The Journal of biocommunication.

A Virtual Screen Discovers Novel, Fragment-Sized Inhibitors of Mycobacterium tuberculosis InhA

Arthur J. Olson, Sean Ekins, Stefano Forli, 2015, J. Chem. Inf. Model..

Automated docking using a Lamarckian genetic algorithm and an empirical binding free energy function

David S. Goodsell, Arthur J. Olson, William E. Hart, 1998, J. Comput. Chem..

Computer Graphics in the Study of Macromolecular Interactions

Arthur J. Olson, John A. Tainer, Elizabeth D. Getzoff, 1987 .

AutoDock Vina: Improving the speed and accuracy of docking with a new scoring function, efficient optimization, and multithreading

Arthur J. Olson, Oleg Trott, A. Olson, 2009, J. Comput. Chem..

GRANNY, a companion to GRAMPS for the real-time manipulation of macromolecular models

Arthur J. Olson, Michael L. Connolly, M. L. Connolly, 1985, Comput. Chem..

Empirical entropic contributions in computational docking: Evaluation in APS reductase complexes

David S. Goodsell, Arthur J. Olson, Richard K. Belew, 2008, J. Comput. Chem..

GRAMPS - A graphics language interpreter for real-time, interactive, three-dimensional picture editing and animation

Arthur J. Olson, T. J. O'Donnell, A. Olson, 1981, SIGGRAPH '81.

Identifying Affordances of 3D Printed Tangible Models for Understanding Core Biological Concepts.

Arthur J. Olson, Jodi L. Davenport, Matt Silberglitt, 2014 .

Virtual screening with AutoDock Vina and the common pharmacophore engine of a low diversity library of fragments and hits against the three allosteric sites of HIV integrase: participation in the SAMPL4 protein–ligand binding challenge

Arthur J. Olson, Alex L. Perryman, Diogo Santos-Martins, 2014, Journal of Computer-Aided Molecular Design.

A semiempirical free energy force field with charge‐based desolvation

David S. Goodsell, Arthur J. Olson, Ruth Huey, 2007, J. Comput. Chem..

Automated docking of ligands to an artificial active site: augmenting crystallographic analysis with computer modeling

David S. Goodsell, Arthur J. Olson, Garrett M. Morris, 2003, J. Comput. Aided Mol. Des..

Integrating biomolecular analysis and visual programming: flexibility and interactivity in the design of bioinformatics tools

Michel F. Sanner, Arthur J. Olson, Ruth Huey, 2003, 36th Annual Hawaii International Conference on System Sciences, 2003. Proceedings of the.

In Touch with Molecules: Improving Student Learning with Innovative Molecular Models.

Arthur J. Olson, Jodi L. Davenport, Matt Silberglitt, 2013 .

Using a Dynamic Physical Model to help Students Visualize the Process of Self-assembly

Arthur J. Olson, Gunnar E. Höst, Lena A. E. Tibell, 2009 .

Augmented reality with tangible auto-fabricated models for molecular biology applications

David S. Goodsell, Michel F. Sanner, Arthur J. Olson, 2004, IEEE Visualization 2004.

Distributed automated docking of flexible ligands to proteins: Parallel applications of AutoDock 2.4

David S. Goodsell, Arthur J. Olson, Ruth Huey, 1996, J. Comput. Aided Mol. Des..

Viral Evolution in Response to the Broad-Based Retroviral Protease Inhibitor TL-3

Arthur J. Olson, Douglas D. Richman, Garrett Morris, 2001, Journal of Virology.

Development of a New Type of Protease Inhibitors, Efficacious against FIV and HIV Variants

Arthur J. Olson, Garrett M. Morris, Van-Duc Le, 1999 .

Segmentation and Volume Rendering of Human Brain Cryosections

Bernd Hamann, Kwan-Liu Ma, Joerg Meyer, 2000 .

Automated Docking of Flexible Ligands to Flexible Receptors

David S. Goodsell, Arthur J. Olson, William E. Hart, 2010 .

Structural Basis for Distinctions between Substrate and Inhibitor Specificities for Feline Immunodeficiency Virus and Human Immunodeficiency Virus Proteases

Arthur J. Olson, Garrett M. Morris, A. Olson, 2003, Journal of Virology.

Grid-Based Hydrogen Bond Potentials with Improved Directionality

David S. Goodsell, Arthur J. Olson, Ruth Huey, 2004 .

Lattice modeling: Accuracy of energy calculations

Michel F. Sanner, Arthur J. Olson, Alexei V. Finkelstein, 1996 .

The reactivity of anti-peptide antibodies is a function of the atomic mobility of sites in a protein

Arthur J. Olson, John A. Tainer, Richard A. Houghten, 1984, Nature.

The Serine-rich Domain from Crk-associated Substrate (p130cas) Is a Four-helix Bundle*

Arthur J. Olson, Kristiina Vuori, David W. Hoyt, 2005, Journal of Biological Chemistry.

Analysis of HIV Wild‐Type and Mutant Structures via in silico Docking Against Diverse Ligand Libraries.

Arthur J. Olson, Richard K. Belew, Max W. Chang, 2007 .

Stabilizers of the Max Homodimer Identified in Virtual Ligand Screening Inhibit Myc Function

Arthur J. Olson, Bin Zhou, Hao Jiang, 2009, Molecular Pharmacology.

Identification of novel β‐secretase inhibitors through the inclusion of protein flexibility in virtual screening calculations

David S. Goodsell, Arthur J. Olson, Ruth Huey, 2008 .

Shape analysis of protein surfaces

Arthur J. Olson, Bruce S. Duncan, 1992 .

Alteration of Substrate and Inhibitor Specificity of Feline Immunodeficiency Virus Protease

Arthur J. Olson, Garrett M. Morris, Van-Duc Le, 2000, Journal of Virology.

p38alpha MAP kinase C-terminal domain binding pocket characterized by crystallographic and computational analyses.

Arthur J. Olson, John A. Tainer, Rodney M. Harris, 2009, Journal of molecular biology.

Structure of tomato bushy stunt virus IVThe virus particle at 29resolution

Arthur J. Olson, Gérard Bricogne, S. Harrison, 1983 .

Data visualization in molecular science : tools for insight and innovation

Arthur J. Olson, A. Olson, J. Bowie, 1994 .

Distinguishing Binders from False Positives by Free Energy Calculations: Fragment Screening Against the Flap Site of HIV Protease

Arthur J. Olson, Lauren Wickstrom, Stefano Forli, 2014, The journal of physical chemistry. B.

3D molecular models of whole HIV-1 virions generated with cellPACK

David S. Goodsell, Michel F. Sanner, Arthur J. Olson, 2014, Faraday discussions.