Yasser B. Ruiz-Blanco

发表

PPI‐Detect: A support vector machine model for sequence‐based prediction of protein–protein interactions

Sandra Romero-Molina, Elsa Sanchez-Garcia, Yasser B. Ruiz-Blanco, 2019, J. Comput. Chem..

Novel “extended sequons” of human N-glycosylation sites improve the precision of qualitative predictions: an alignment-free study of pattern recognition using ProtDCal protein features

Yovani Marrero-Ponce, Enrique García-Hernández, Yasser B. Ruiz-Blanco, 2017, Amino Acids.

ABP-Finder: A Tool to Identify Antibacterial Peptides and the Gram-Staining Type of Targeted Bacteria

Yasser B. Ruiz-Blanco, A. Antunes, Y. B. Ruiz-Blanco, 2022, Antibiotics.

Alpha-1 antitrypsin inhibits TMPRSS2 protease activity and SARS-CoV-2 infection

Yasser B. Ruiz-Blanco, F. Kirchhoff, J. Münch, 2021, Nature Communications.

Exploring general-purpose protein features for distinguishing enzymes and non-enzymes within the twilight zone

Yasser B. Ruiz-Blanco, J. Green, A. Antunes, 2017, BMC Bioinformatics.

PPI-Affinity: A Web Tool for the Prediction and Optimization of Protein–Peptide and Protein–Protein Binding Affinity

Yasser B. Ruiz-Blanco, Y. B. Ruiz-Blanco, J. Münch, 2022, Journal of proteome research.

ProtDCal‐Suite: A web server for the numerical codification and functional analysis of proteins

James R Green, Sandra Romero-Molina, Yasser B Ruiz-Blanco, 2019, Protein science : a publication of the Protein Society.

ProtDCal: A program to compute general-purpose-numerical descriptors for sequences and 3D-structures of proteins

Yasser B. Ruiz-Blanco, J. Green, Y. B. Ruiz-Blanco, 2015, BMC Bioinformatics.

A Hooke׳s law-based approach to protein folding rate.

Yovani Marrero-Ponce, Yasser B Ruiz-Blanco, Yasser B. Ruiz-Blanco, 2015, Journal of theoretical biology.

A physics-based scoring function for protein structural decoys: Dynamic testing on targets of CASP-ROLL

Yasser B. Ruiz-Blanco, J. Green, Rafael Bello, 2014 .

Global stability of protein folding from an empirical free energy function.

Yovani Marrero-Ponce, Yasser B Ruiz-Blanco, Waldo Paz, 2013, Journal of theoretical biology.

Specific inhibition of the Survivin–CRM1 interaction by peptide-modified molecular tweezers

Yasser B. Ruiz-Blanco, D. Hoffmann, Y. B. Ruiz-Blanco, 2021, Nature Communications.

Engineering protein fragments via evolutionary and protein–protein interaction algorithms: de novo design of peptide inhibitors for FOF1‐ATP synthase

Yasser B. Ruiz-Blanco, A. Antunes, Y. B. Ruiz-Blanco, 2020, FEBS letters.

The role of DNA nanostructures in the catalytic properties of an allosterically regulated protease

Yasser B. Ruiz-Blanco, B. Saccà, Michael Erkelenz, 2022, Science advances.

Peptide and peptide-based inhibitors of SARS-CoV-2 entry

Yasser B. Ruiz-Blanco, F. Kirchhoff, Y. B. Ruiz-Blanco, 2020, Advanced Drug Delivery Reviews.

A Placenta Derived C-Terminal Fragment of β-Hemoglobin With Combined Antibacterial and Antiviral Activity

Yasser B. Ruiz-Blanco, T. Weil, F. Kirchhoff, 2020, Frontiers in Microbiology.

Proteome-wide Prediction of Lysine Methylation Leads to Identification of H2BK43 Methylation and Outlines the Potential Methyllysine Proteome.

Yasser B. Ruiz-Blanco, J. Green, M. Galka, 2020, Cell reports.

Advanced EPI-X4 Derivatives Covalently Bind Human Serum Albumin Resulting in Prolonged Plasma Stability

Yasser B. Ruiz-Blanco, J. Münch, S. Wiese, 2022, International journal of molecular sciences.

Selective Disruption of Survivin's Protein‐Protein Interactions: A Supramolecular Approach Based on Guanidiniocarbonylpyrrole

Yasser B. Ruiz-Blanco, S. Tripathi, C. Schmuck, 2022, ChemBioChem.

Control of TLR7-mediated type I IFN signaling in pDCs through CXCR4 engagement—A new target for lupus treatment

Yasser B. Ruiz-Blanco, C. Bodemer, F. Kirchhoff, 2019, Science Advances.

Unveiled electric profiles within hydrogen bonds suggest DNA base pairs with similar bond strengths

Yasser B. Ruiz-Blanco, Y. B. Ruiz-Blanco, Y. García, 2017, PloS one.

Orthotropic Piezoelectricity in 2D Nanocellulose

Yasser B. Ruiz-Blanco, Y. Marrero-Ponce, Y. García, 2016, Scientific Reports.

Multivalent Ligands with Tailor‐Made Anion Binding Motif as Stabilizers of Protein–Protein Interactions

Yasser B. Ruiz-Blanco, C. Ottmann, Y. B. Ruiz-Blanco, 2019, Chembiochem : a European journal of chemical biology.

Optical and mechanical properties of nanofibrillated cellulose: Toward a robust platform for next-generation green technologies.

M. R. Wagner, Yasser B. Ruiz-Blanco, J. Ahopelto, 2015, Carbohydrate polymers.

Spermine and spermidine bind CXCR4 and inhibit CXCR4- but not CCR5-tropic HIV-1 infection

Yasser B. Ruiz-Blanco, J. Münch, S. Wiese, 2023, Science advances.

Inhibition of Staphylococcus aureus biofilm-forming functional amyloid by molecular tweezers.

Yasser B. Ruiz-Blanco, G. Bitan, M. Landau, 2021, Cell chemical biology.

Supramolecular Mechanism of Viral Envelope Disruption by Molecular Tweezers

Yasser B. Ruiz-Blanco, T. Weil, G. Bitan, 2020, Journal of the American Chemical Society.

CL-FEP: An End-State Free Energy Perturbation Approach.

Yasser B. Ruiz-Blanco, E. Sánchez-García, 2020, Journal of chemical theory and computation.

Mono- and Bivalent 14-3-3 Inhibitors for Characterizing Supramolecular "Lysine Wrapping" of Oligoethylene Glycol (OEG) Moieties in Proteins.

Yasser B. Ruiz-Blanco, C. Ottmann, M. Kaiser, 2018, Chemistry.

Proteome-wide Prediction of Lysine Methylation Reveals Novel Histone Marks and Outlines the Methyllysine Proteome

Yasser B. Ruiz-Blanco, J. Green, M. Galka, 2018, bioRxiv.

Expanding the Current Boundaries of Nature-based Modeling and Computing: Chem-Inspiration for Meta-Heuristics

Yasser B. Ruiz-Blanco, Rafael Bello, Y. B. Ruiz-Blanco, 2021 .

Respiratory ß-2-Microglobulin exerts pH dependent antimicrobial activity

Yasser B. Ruiz-Blanco, Y. B. Ruiz-Blanco, J. Münch, 2020, Virulence.