Shyamal D. Peddada

发表

ORIOGEN: order restricted inference for ordered gene expression data

Shyamal D. Peddada, Shawn F. Harris, J. Zajd, 2005, Bioinform..

A multiple testing procedure for multi-dimensional pairwise comparisons with application to gene expression studies

Wenge Guo, Shyamal D. Peddada, Anjana Grandhi, 2016, BMC Bioinformatics.

Evaluation of microarray normalization strategies to detect cyclic circadian genes.

Shyamal D. Peddada, Yolanda Larriba González, Cristina Rueda Sabater, 2016 .

Estimating and testing circular orders for cell cycle genes expression data

Shyamal D. Peddada, Cristina Rueda, Sandra Barragán, 2013 .

Analysis of high dimensional data using pre-defined set and subset information, with applications to genomic data

Wenge Guo, Shyamal D. Peddada, Mingan Yang, 2012, BMC Bioinformatics.

Novel Developmental Analyses Identify Longitudinal Patterns of Early Gut Microbiota that Affect Infant Growth

Shyamal D. Peddada, Winston Hide, Marcello Pagano, 2013, PLoS Comput. Biol..

Inference on circular orders with application to cell cycle gene expression data

Shyamal D. Peddada, Cristina Rueda, Sandra Barragán, 2013 .

A geometric approach to determine association and coherence of the activation times of cell-cycling genes under differing experimental conditions

Shyamal D. Peddada, Clarice R. Weinberg, Delong Liu, 2004, Bioinform..

A response to information criterion-based clustering with order-restricted candidate profiles in short time-course microarray experiments

Shyamal D. Peddada, Shawn F. Harris, David M. Umbach, 2009, BMC Bioinformatics.

Adaptive Multiple Testing Procedures under Positive Dependence

Biostatistics Branch, Shyamal D. Peddada, Wenge Guo, 2010 .

Statistical Analysis of Gene Expression Studies with Ordered Experimental Conditions

Shyamal D. Peddada, Shawn F. Harris, David M. Umbach, 2012 .

Gene Selection and Clustering for Time-course and Dose-response Microarray Experiments Using Order-restricted Inference

Shyamal D. Peddada, Leping Li, David M. Umbach, 2003, Bioinform..

A Biologist's Guide to Analysis of DNA Micro‐Array Data. Steen Knudsen, Wiley, New York, 2002. No. of pages: xiii + 125. ISBN 0‐471‐22490‐1

Shyamal D. Peddada, 2003 .

Dissecting the fission yeast regulatory network reveals phase-specific control elements of its cell cycle

Pierre R. Bushel, Nicholas A. Heard, Liwen Liu, 2009, BMC Systems Biology.

Simple example of the reasoning behind differential abundance simulations

Zhenjiang Xu, Shyamal D. Peddada, Kyle Bittinger, 2015 .

A Bootstrap Based Measure Robust to the Choice of Normalization Methods for Detecting Rhythmic Features in High Dimensional Data

Shyamal D. Peddada, Cristina Rueda, Yolanda Larriba, 2018, Front. Genet..

Phase analysis of circadian-related genes in two tissues.

Shyamal D. Peddada, Leping Li, Clarice R. Weinberg, 2006, BMC bioinformatics.

Shape Detection Using Semi-Parametric Shape-Restricted Mixed Effects Regression Spline with Applications

Shyamal D. Peddada, Qing Yin, Xiaoshuang Xun, 2021, Sankhya B.

450K Epigenome-Wide Scan Identifies Differential DNA Methylation in Newborns Related to Maternal Smoking during Pregnancy

Susan K. Murphy, Shyamal D. Peddada, Douglas A. Bell, 2012, Environmental health perspectives.

Analysis of Microbiome Data in the Presence of Excess Zeros

Shyamal D. Peddada, Ori Davidov, Abhishek Kaul, 2017, Front. Microbiol..

Analysis of composition of microbiomes: a novel method for studying microbial composition

Rob Knight, Shyamal D. Peddada, Merete Eggesbø, 2015, Microbial ecology in health and disease.

Confidence Interval Estimation Subject to Order Restrictions

Shyamal D. Peddada, J. T. Hwang, S. Peddada, 1994 .

Estimation of order-restricted means from correlated data

David B. Dunson, Shyamal D. Peddada, D. Dunson, 2005 .

Stochastic ordering approach to off-line quality control

Shyamal D. Peddada, S. N. U. A. Kirmani, 1993 .

Potential for a Global Historical Control Database for Proliferative Rodent Lesions

Shyamal D. Peddada, Douglas C. Wolf, Susan A. Elmore, 2009, Toxicologic pathology.

Tests for a simple tree order restriction with application to dose-response studies

Shyamal D. Peddada, Joseph K. Haseman, J. Haseman, 2006 .

DNA Methylation Score as a Biomarker in Newborns for Sustained Maternal Smoking during Pregnancy

Per Magne Ueland, Shyamal D. Peddada, Shanshan Zhao, 2016, Environmental health perspectives.

Proof of a conjecture of M. L. Eaton on the characteristic function of the Wishart distribution

Shyamal D. Peddada, Donald St. P. Richards, S. Peddada, 1991 .

Confidence interval estimation of population means subject to order restrictions using resampling procedures

Shyamal D. Peddada, S. Peddada, 1997 .

Parameter Estimation in Linear Models with Heteroscedastic Variances Subject to Order Restrictions

Shyamal D. Peddada, S. Peddada, Carol Lynne Hoferkamp, 2002 .

Jackknife variance estimators in linear models

Shyamal D. Peddada, Girish Patwardhan, 1992 .