James G. Mork

发表

A One-Size-Fits-All Indexing Method Does Not Exist: Automatic Selection Based on Meta-Learning

Antonio Jimeno-Yepes, Dina Demner-Fushman, Alan R. Aronson, 2012, J. Comput. Sci. Eng..

Comment on 'MeSH-up: effective MeSH text classification for improved document retrieval'

Alan R. Aronson, Aurélie Névéol, James G. Mork, 2009, Bioinform..

Fine-Grained Indexing of the Biomedical Literature: MeSH Subheading Attachment for a MEDLINE Indexing Tool

Alan R. Aronson, Aurélie Névéol, James G. Mork, 2007, AMIA.

Text-based discovery in biomedicine: the architecture of the DAD-system

Marc Weeber, Alan R. Aronson, James G. Mork, 2000, AMIA.

Mining MEDLINE for problems associated with vitamin D

Dina Demner-Fushman, Alan R. Aronson, James G. Mork, 2013, AMIA.

Gene Indexing: Characterization and Analysis of NLM's GeneRIFs

Joyce A. Mitchell, Susanne M. Humphrey, Alan R. Aronson, 2003, AMIA.

Finding UMLS Metathesaurus concepts in MEDLINE

William T. Hole, Thomas C. Rindflesch, Alan R. Aronson, 2002, AMIA.

Comparison and combination of several MeSH indexing approaches

Antonio Jimeno-Yepes, Dina Demner-Fushman, Alan R. Aronson, 2013, AMIA.

Methods for Accurate Retrieval of MEDLINE Citations in Functional Genomics

Mehmet Kayaalp, Olivier Bodenreider, Dina Demner-Fushman, 2003, TREC.

Knowledge-Intensive and Statistical Approaches to the Retrieval and Annotation of Genomics MEDLINE Citations

Hongfang Liu, Dina Demner-Fushman, Susanne M. Humphrey, 2004, TREC.

MEDLINE MeSH indexing: lessons learned from machine learning and future directions

Antonio Jimeno-Yepes, Dina Demner-Fushman, Alan R. Aronson, 2012, IHI '12.

Finding medication doses in the literature

Alan R. Aronson, Willie J. Rogers, James G. Mork, 2018, AMIA.

The NLM Indexing Initiative's Medical Text Indexer

Susanne M. Humphrey, Alan R. Aronson, Willie J. Rogers, 2004, MedInfo.

A recent advance in the automatic indexing of the biomedical literature

Susanne M. Humphrey, Alan R. Aronson, Aurélie Névéol, 2009, J. Biomed. Informatics.

The NLM Medical Text Indexer System for Indexing Biomedical Literature

Antonio Jimeno-Yepes, Alan R. Aronson, James G. Mork, 2013, BioASQ@CLEF.

MeSH indexing based on automatically generated summaries

Antonio Jimeno-Yepes, Alan R. Aronson, Laura Plaza, 2013, BMC Bioinformatics.

Automated Assignment of Medical Subject Headings

Olivier Bodenreider, Alexa T. McCray, W. John Wilbur, 1999, AMIA.

Using Natural Language Processing, LocusLink and the Gene Ontology to Compare OMIM to MEDLINE

Halil Kilicoglu, Thomas C. Rindflesch, Alan R. Aronson, 2004, HLT-NAACL 2004.

Combining Resources to Find Answers to Biomedical Questions

Patrick Ruch, Dina Demner-Fushman, Susanne M. Humphrey, 2007, TREC.

Automatic Indexing of Specialized Documents: Using Generic vs. Domain-Specific Document Representations

Alan R. Aronson, Aurélie Névéol, James G. Mork, 2007, BioNLP@ACL.

Identifying Publication Types Using Machine Learning

Antonio Jimeno-Yepes, Alan R. Aronson, James G. Mork, 2013, BioASQ@CLEF.

Using Learning-To-Rank to Enhance NLM Medical Text Indexer Results

Dina Demner-Fushman, Ilya Zavorin, James G. Mork, 2016, Proceedings of the Fourth BioASQ workshop.

12 years on – Is the NLM medical text indexer still useful and relevant?

Dina Demner-Fushman, Alan R. Aronson, James G. Mork, 2017, Journal of Biomedical Semantics.

Convolutional Neural Network for Automatic MeSH Indexing

Dina Demner-Fushman, James G. Mork, Alastair R. Rae, 2019, PKDD/ECML Workshops.

Evaluation of French and English MeSH Indexing Systems with a Parallel Corpus

Stéfan Jacques Darmoni, Alan R. Aronson, Aurélie Névéol, 2005, AMIA.

Recent Enhancements to the NLM Medical Text Indexer

Dina Demner-Fushman, Alan R. Aronson, James G. Mork, 2014, CLEF.

A High Recall Classifier for Selecting Articles for MEDLINE Indexing

Dina Demner-Fushman, James G. Mork, Alastair R. Rae, 2020, AMIA.

Extracting Characteristics of the Study Subjects from Full-Text Articles

Dina Demner-Fushman, James G. Mork, 2015, AMIA.

NLM at TREC 2012 Medical Records Track

Antonio Jimeno-Yepes, Dina Demner-Fushman, Russell F. Loane, 2012, TREC.

Using the Argumentative Structure of Scientific Literature to Improve Information Access

Antonio Jimeno-Yepes, Alan R. Aronson, James G. Mork, 2013, BioNLP@ACL.

Resolving Hierarchical Ambiguity in Indexing Recommendations

Dina Demner-Fushman, James G. Mork, 2016, AMIA.

Application of a Medical Text Indexer to an Online Dermatology Atlas

Alan R. Aronson, Christoph U. Lehmann, George R. Kim, 2004, MedInfo.

Extracting Rx information from clinical narrative

Zhiyong Lu, Olivier Bodenreider, Dina Demner-Fushman, 2010, J. Am. Medical Informatics Assoc..

Feature engineering for MEDLINE citation categorization with MeSH

Antonio Jimeno-Yepes, Alan R. Aronson, Jorge Carrillo de Albornoz, 2015, BMC Bioinformatics.

UMLS content views appropriate for NLP processing of the biomedical literature vs. clinical text

Dina Demner-Fushman, Alan R. Aronson, James G. Mork, 2010, J. Biomed. Informatics.

Analysis of biomedical text for chemical names: a comparison of three methods

Allen C. Browne, Guy Divita, W. John Wilbur, 1999, AMIA.

Vocabulary Density Method for Customized Indexing of MEDLINE Journals

Dina Demner-Fushman, Alan R. Aronson, James G. Mork, 2014, AMIA.

From indexing the biomedical literature to coding clinical text: experience with MTI and machine learning approaches

Olivier Bodenreider, Dina Demner-Fushman, Alan R. Aronson, 2007, BioNLP@ACL.

Increasing UMLS Coverage and Reducing Ambiguity via Automated Creation of Synonymous Terms

Dina Demner-Fushman, Alan R. Aronson, James G. Mork, 2018, AMIA.

GeneRIF indexing: sentence selection based on machine learning

Antonio Jimeno-Yepes, Alan R. Aronson, James G. Mork, 2013, BMC Bioinformatics.

The NLM Indexing Initiative

Olivier Bodenreider, Thomas C. Rindflesch, Susanne M. Humphrey, 2000, AMIA.

Evaluation of System for Selective Indexing Classification

Dina Demner-Fushman, James G. Mork, Susan Schmidt, 2019, AMIA.

Developing a test collection for biomedical word sense disambiguation

Marc Weeber, Alan R. Aronson, James G. Mork, 2001, AMIA.

Structured Abstracts in MEDLINE: Implementation Based on a Retrospective Cohort Study

James G. Mork, Anna Ripple, Lou Knecht, 2012, AMIA.

Methodology for Creating UMLS Content Views Appropriate for Biomedical Natural Language Processing

Dina Demner-Fushman, Alan R. Aronson, Aurélie Névéol, 2008, AMIA.

Automatic recognition of figurative language in biomedical articles

Dina Demner-Fushman, Willie J. Rogers, James G. Mork, 2021, SDU@AAAI.

A Neural Text Ranking Approach for Automatic MeSH Indexing

Dina Demner-Fushman, James G. Mork, Alastair R. Rae, 2021, CLEF.

Proper filter usage to retrieve multiwords from the MEDLINE n-gram set: Reply to the Turki et al commentary "Enhancing filter-based parenthetic abbreviation extraction methods"

Chris J. Lu, James G. Mork, Amanda Payne, 2021, J. Am. Medical Informatics Assoc..

Sizing the Problem of Improving Discovery and Access to NIH-Funded Data: A Preliminary Study

Betsy L. Humphreys, James G. Mork, B. Humphreys, 2015, PloS one.

Text-based discovery in biomedicine

Marc Weeber, Alan R. Aronson, James G. Mork, 2000 .

NLM’s System Description for the Fourth i2b2/VA Challenge

Dina Demner-Fushman, Alan R. Aronson, Aurélie Névéol, 2010 .

UMLS Content Views Appropriate for NLP Processing

James G. Mork, A. Aronson, S. E. Shooshan, 2010 .

The Gene Indexing Assistant

James G. Mork, Caitlin Sticco, A. Yepes, 2018 .

Automatic MeSH Indexing: Revisiting the Subheading Attachment Problem

James G. Mork, Alastair R. Rae, Dina Demner-Fushman, 2020, AMIA.

The National Library of Medicine indexer assignment dataset: A new large‐scale dataset for reviewer assignment research

James G. Mork, Alastair R. Rae, Dina Demner-Fushman, 2022, J. Assoc. Inf. Sci. Technol..

12 years on – Is the NLM medical text indexer still useful and relevant?

James G. Mork, Dina Demner-Fushman, A. Aronson, 2017, Journal of Biomedical Semantics.

A Neural Text Ranking Approach for Automatic MeSH Indexing

James G. Mork, Alastair R. Rae, Dina Demner-Fushman, 2021, CLEF.

Chemical Entity Recognition for MEDLINE Indexing.

Dina Demner-Fushman, Willie J. Rogers, James G. Mork, 2020, AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science.

The Unified Medical Language System SPECIALIST Lexicon and Lexical Tools: Development and applications

Chris J. Lu, James G. Mork, Amanda Payne, 2020, J. Am. Medical Informatics Assoc..

A bottom-up approach to MEDLINE indexing recommendations.

James G. Mork, Alan R Aronson, James G Mork, 2011, AMIA ... Annual Symposium proceedings. AMIA Symposium.

Enhanced Features in the SPECIALIST Lexicon - Antonyms

Chris J. Lu, James G. Mork, A. Payne, 2020, AMIA.

of the Biomedical Literature vs. Clinical Text

James G. Mork, S. E. Shooshan, 2010 .