Cheng-Yu Ma

Reconstruction of phyletic trees by global alignment of multiple metabolic networks

Chuan Yi Tang, Cheng-Yu Ma, Shu-Hsi Lin, 2013, BMC Bioinformatics.

A review of protein–protein interaction network alignment: From pathway comparison to global alignment

Cheng-Yu Ma, Chung-Shou Liao, Chung-Shou Liao, 2020, Computational and structural biotechnology journal.

Optimizing a global alignment of protein interaction networks

Cheng-Yu Ma, Bonnie Berger, Chung-Shou Liao, 2013, Bioinform..

Identification of protein complexes by integrating multiple alignment of protein interaction networks

Cheng-Yu Ma, Bonnie Berger, Chung-Shou Liao, 2017, Bioinform..

GI-POP: a combinational annotation and genomic island prediction pipeline for ongoing microbial genome projects.

Chuan Yi Tang, Cheng-Yu Ma, Ping-Chiang Lyu, 2013, Gene.