Robert Preissner

发表

SuperSweet—a resource on natural and artificial sweetening agents

Jessica Ahmed, Saskia Preissner, Mathias Dunkel, 2010, Nucleic Acids Res..

SuperHapten: a comprehensive database for small immunogenic compounds

Kristian Rother, Stefan Günther, Mathias Dunkel, 2006, Nucleic Acids Res..

Cellular Fingerprints: A Novel Concept for the Integration of Experimental Data and Compound-Target-Pathway Relations (Extended Abstract)

Stefan Günther, Jessica Ahmed, Robert Preissner, 2007, BSB.

SuperNatural: a searchable database of available natural compounds

Mathias Dunkel, Robert Preissner, Stefanie Neumann, 2005, Nucleic Acids Res..

Accelerating screening of 3D protein data with a graph theoretical approach

Till Nierhoff, Martin Thimm, Robert Preissner, 2003, Bioinform..

ProTox-II: a webserver for the prediction of toxicity of chemicals

Andreas Eckert, Robert Preissner, Priyanka Banerjee, 2018, Nucleic Acids Res..

Omics technologies for the prediction of immunmodulatory effects

Robert Preissner, Jörg Bernhardt, Paula Zwicker, 2015 .

Comparison of 2D Similarity and 3D Superposition. Application to Searching a Conformational Drug Database

Martin Thimm, Robert Preissner, Stefan Hougardy, 2004, J. Chem. Inf. Model..

Computational methods for prediction of in vitro effects of new chemical structures

Robert Preissner, Priyanka Banerjee, Vishal B. Siramshetty, 2016, Journal of Cheminformatics.

SuperToxic: a comprehensive database of toxic compounds

Ulrike Schmidt, Robert Preissner, Björn A. Grüning, 2008, Nucleic Acids Res..

SuperMimic – Fitting peptide mimetics into protein structures

Ulrike Schmidt, Robert Preissner, Andrean Goede, 2006, BMC Bioinformatics.

Columba - A Database of Annotations of Protein Structure

Thomas Steinke, Ulf Leser, Heiko Müller, 2003 .

Inhomogeneous molecular density: reference packing densities and distribution of cavities within proteins

Kristian Rother, Robert Preissner, Cornelius Frömmel, 2003, Bioinform..

CancerResource—updated database of cancer-relevant proteins, mutations and interacting drugs

Mathias Dunkel, Robert Preissner, Björn-Oliver Gohlke, 2015, Nucleic Acids Res..

CancerResource: a comprehensive database of cancer-relevant proteins and compound interactions supported by experimental knowledge

Corinna Blasse, Robert Adams, Jessica Ahmed, 2010, Nucleic Acids Res..

A procedure for superposition of two arbitrary atomic arrangements

Robert Preissner, Cornelius Frömmel, Andrean Goede, 1998, German Conference on Bioinformatics.

Prediction Is a Balancing Act: Importance of Sampling Methods to Balance Sensitivity and Specificity of Predictive Models Based on Imbalanced Chemical Data Sets

Robert Preissner, Priyanka Banerjee, Frederic O. Dehnbostel, 2018, Front. Chem..

mVOC 2.0: a database of microbial volatiles

Saskia Preissner, Robert Preissner, Björn-Oliver Gohlke, 2017, Nucleic Acids Res..

Fast Structural Alignment of Biomolecules Using a Hash Table, N-Grams and String Descriptors

Thomas Steinke, Kristian Rother, Knut Reinert, 2009, Algorithms.

Columba: Multidimensional Data Integration of Protein Annotations

Thomas Steinke, Ulf Leser, Ina Koch, 2004, DILS.

A distributed pipeline for structure prediction

Robert Preissner, P. May, Elke Michalsky, 2004 .

The Transformer database: biotransformation of xenobiotics

Saskia Preissner, Mathias Dunkel, Robert Preissner, 2013, Nucleic Acids Res..

SOAP/WSDL-Based Web Services for Biomedicine: Demonstrating the Technique with the CancerResource

Ralf Herwig, Jessica Ahmed, Mathias Dunkel, 2010 .

SuperTarget and Matador: resources for exploring drug-target relationships

Robert B. Russell, Philip E. Bourne, Reinhard Schneider, 2007, Nucleic Acids Res..

Columba: an integrated database of proteins, structures, and annotations

Thomas Steinke, Ulf Leser, Ina Koch, 2005, BMC Bioinformatics.

mVOC: a database of microbial volatiles

Mathias Dunkel, Robert Preissner, Janette Nickel, 2013, Nucleic Acids Res..

Super Natural II—a database of natural products

Mathias Dunkel, Robert Preissner, Björn-Oliver Gohlke, 2014, Nucleic Acids Res..

VaccImm: simulating peptide vaccination in cancer therapy

Filippo Castiglione, Robert Preissner, Joachim von Eichborn, 2013, BMC Bioinformatics.

Interfaces of Secondary Structural Elements in Proteins - Evolution of Atomic Substructures -

Kristian Rother, Robert Preissner, Christoph Gille, 1999, German Conference on Bioinformatics.

ProTox: a web server for the in silico prediction of rodent oral toxicity

Mathias Dunkel, Robert Preissner, Priyanka Banerjee, 2014, Nucleic Acids Res..

SuperPain—a resource on pain-relieving compounds targeting ion channels

Saskia Preissner, Robert Preissner, Björn-Oliver Gohlke, 2013, Nucleic Acids Res..

SuperScent—a database of flavors and scents

Ulrike Schmidt, Mathias Dunkel, Robert Preissner, 2008, Nucleic Acids Res..

FragmentStore—a comprehensive database of fragments linking metabolites, toxic molecules and drugs

Corinna Blasse, Jessica Ahmed, Mathias Dunkel, 2010, Nucleic Acids Res..

Cobweb: a Java applet for network exploration and visualisation

Philip E. Bourne, Robert Preissner, Joachim von Eichborn, 2011, Bioinform..

SuperLooper—a prediction server for the modeling of loops in globular and membrane proteins

Robert Preissner, Jochen Ismer, Björn A. Grüning, 2009, Nucleic Acids Res..

SuperCYP: a comprehensive database on Cytochrome P450 enzymes including a tool for analysis of CYP-drug interactions

Michael Schroeder, Christian Senger, Stefan Günther, 2009, Nucleic Acids Res..

SuperDrug: a conformational drug database

Mathias Dunkel, Robert Preissner, Cornelius Frömmel, 2005, Bioinform..

Computer-assisted identification of small-molecule Bcl-2 modulators

Robert Preissner, Melanie Füllbeck, Julia Hossbach, 2009, Comput. Biol. Chem..

SynSysNet: integration of experimental data on synaptic protein–protein interactions with drug-target relations

Martin H. Schaefer, Nicolas Le Novère, J. Douglas Armstrong, 2012, Nucleic Acids Res..

A structural keystone for drug design

Ulf Leser, Kristian Rother, Mathias Dunkel, 2006, J. Integr. Bioinform..

Representation of target-bound drugs by computed conformers: implications for conformational libraries

Christian Senger, Stefan Günther, Robert Preissner, 2006, BMC Bioinformatics.

Robert Preissner, Christoph Gille, Cornelius Frömmel, 1998, German Conference on Bioinformatics.

SuperLigands – a database of ligand structures derived from the Protein Data Bank

Mathias Dunkel, Robert Preissner, Andrean Goede, 2005, BMC Bioinformatics.

Matching organic libraries with protein-substructures

Kristian Rother, Robert Preissner, Cornelius Frömmel, 2001, J. Comput. Aided Mol. Des..

Mathias Dunkel, Robert Preissner, Andrean Goede, 2015, Front. Environ. Sci..

SuperTarget goes quantitative: update on drug–target interactions

Philip E. Bourne, Michael K. Gilson, Jessica Ahmed, 2011, Nucleic Acids Res..

SL2: an interactive webtool for modeling of missing segments in proteins

Alexander S. Rose, Robert Preissner, Johanna K. S. Tiemann, 2016, Nucleic Acids Res..

Superimposé: a 3D structural superposition server

Arno Formella, Philip E. Bourne, Valentin Ziegler, 2008, Nucleic Acids Res..

WITHDRAWN—a resource for withdrawn and discontinued drugs

Robert Preissner, Vishal B. Siramshetty, Malgorzata N. Drwal, 2015, Nucleic Acids Res..

Natural products: sources and databases.

Mathias Dunkel, Robert Preissner, Melanie Füllbeck, 2006, Natural product reports.

SuperPred: drug classification and target prediction

Stefan Günther, Jessica Ahmed, Mathias Dunkel, 2008, Nucleic Acids Res..

SuperPred: update on drug classification and target prediction

Mathias Dunkel, Robert Preissner, Andrean Goede, 2014, Nucleic Acids Res..

SuperDRUG2: a one stop resource for approved/marketed drugs

Saskia Preissner, Andreas Eckert, Robert Preissner, 2017, Nucleic Acids Res..

Suffix techniques as a rapid method for RNA substructure search.

Janusz M Bujnicki, Robert Preissner, Kristian Rother, 2008, Genome informatics. International Conference on Genome Informatics.

Exploring Activity Profiles of PAINS and Their Structural Context in Target-Ligand Complexes

Robert Preissner, Vishal B. Siramshetty, Vishal B Siramshetty, 2018, J. Chem. Inf. Model..

Anja Richter, Robert Preissner, Tim Overkamp, 2015, BMC Bioinformatics.

Dictionary of Interfaces in Proteins (DIP). Data Bank of complementary molecular surface patches

Robert Preissner, Cornelius Frömmel, Andrean Goede, 1998, German Conference on Bioinformatics.

JAIL: a structure-based interface library for macromolecules

Stefan Günther, Robert Preissner, Patrick May, 2008, Nucleic Acids Res..

PROMISCUOUS: a database for network-based drug-repositioning

Philip E. Bourne, Mathias Dunkel, Robert Preissner, 2010, Nucleic Acids Res..

The Catch-22 of Predicting hERG Blockade Using Publicly Accessible Bioactivity Data

Robert Preissner, Vishal B. Siramshetty, Prashanth Devarakonda, 2018, J. Chem. Inf. Model..

Voronoi cell: New method for allocation of space among atoms: Elimination of avoidable errors in calculation of atomic volume and density

Robert Preissner, Cornelius Frömmel, Andrean Goede, 1997, J. Comput. Chem..

Homonyms and synonyms in the Dictionary of Interfaces in Proteins (DIP)

Robert Preissner, Cornelius Frömmel, Andrean Goede, 1999, Bioinform..

SUPERFICIAL – Surface mapping of proteins via structure-based peptide library design

Robert Preissner, Andrean Goede, Ines S. Jaeger, 2005, BMC Bioinformatics.

Voronoia: analyzing packing in protein structures

Kristian Rother, Robert Preissner, Björn A. Grüning, 2008, Nucleic Acids Res..

SuperSite: dictionary of metabolite and drug binding sites in proteins

Stefan Günther, Robert Preissner, Raphael André Bauer, 2008, Nucleic Acids Res..

Structural features of transmembrane helices

Robert Preissner, Cornelius Frömmel, Peter Werner Hildebrand, 2004, FEBS letters.

Analysis and prediction of helix–helix interactions in membrane channels and transporters

Robert Preissner, Andrean Goede, A. Goede, 2006, Proteins.

Theoretical Modeling Techniques and Their Impact on Tumor Immunology

Robert Preissner, Manuela S. Murgueitio, Anna Lena Woelke, 2010, Clinical & developmental immunology.

Prediction of prolyl residues in cis‐conformation in protein structures on the basis of the amino acid sequence

Robert Preissner, Cornelius Frömmel, R. Preissner, 1990, FEBS letters.

Structural features and evolution of protein-protein interactions.

Stefan Günther, Robert Preissner, R. Preissner, 2010, Genome informatics. International Conference on Genome Informatics.

Volatile organic compounds in the breath of oral candidiasis patients: a pilot study

Saskia Preissner, Robert Preissner, R. Preissner, 2018, Clinical Oral Investigations.

Docking without docking: ISEARCH—prediction of interactions using known interfaces

Andreas Hoppe, Stefan Günther, Robert Preissner, 2007, Proteins.

Binding sites in membrane proteins--diversity, druggability and prospects.

Mathias Dunkel, Catherine L. Worth, Robert Preissner, 2012, European journal of cell biology.

Drug Cocktail Optimization in Chemotherapy of Cancer

Saskia Preissner, Mathias Dunkel, Robert Preissner, 2012, PloS one.

Computational prediction of immune cell cytotoxicity.

Robert Preissner, Anna K. Schrey, Paula Zwicker, 2017, Food and chemical toxicology : an international journal published for the British Industrial Biological Research Association.

Drugs as habitable planets in the space of dark chemical matter.

Robert Preissner, Vishal B. Siramshetty, Vishal B Siramshetty, 2017, Drug discovery today.

Conservation of cis prolyl bonds in proteins during evolution

Robert Preissner, Björn Peters, Cornelius Frömmel, 2004, Proteins.

Cellular Fingerprints: A Novel Approach Using Large‐Scale Cancer Cell Line Data for the Identification of Potential Anticancer Agents

Mathias Dunkel, Robert Preissner, Melanie Füllbeck, 2009, Chemical biology & drug design.

Characterization of GD2 peptide mimotope DNA vaccines effective against spontaneous neuroblastoma metastases.

Robert Preissner, Ines S. Jaeger, Elke Michalsky, 2006, Cancer research.

Comparison of 2D Similarity and 3D Superposition. Application to Searching a Conformational Drug Database.

Martin Thimm, Robert Preissner, Stefan Hougardy, 2004 .

Natural Products: Sources and Databases

Mathias Dunkel, Robert Preissner, Elke Michalsky, 2006 .

Chemical Proteomics Reveals Ferrochelatase as a Common Off-target of Kinase Inhibitors.

Robert Preissner, Hiroshi Handa, Bernhard Kuster, 2016, ACS chemical biology.

BitterSweetForest: A Random Forest Based Binary Classifier to Predict Bitterness and Sweetness of Chemical Compounds

Robert Preissner, Priyanka Banerjee, R. Preissner, 2018, Front. Chem..

A New Algorithm for Integrated Analysis of miRNA-mRNA Interactions Based on Individual Classification Reveals Insights into Bladder Cancer

Klaus Jung, Robert Preissner, Carsten Stephan, 2013, PloS one.

In silico screening of drug databases for TSE inhibitors.

Mathias Dunkel, Robert Preissner, Stephan Lorenzen, 2005, Bio Systems.

Novel curcumin- and emodin-related compounds identified by in silico 2D/3D conformer screening induce apoptosis in tumor cells

Robert Preissner, Melanie Füllbeck, Xiaohua Huang, 2005, BMC Cancer.

Molecular packing and packing defects in helical membrane proteins.

Kristian Rother, Robert Preissner, Cornelius Frömmel, 2005, Biophysical journal.

Inverse sequence similarity of proteins does not imply structural similarity

Robert Preissner, Christoph Gille, Cornelius Frömmel, 2003, FEBS letters.

Hydrogen-bonding and packing features of membrane proteins: functional implications.

Stefan Günther, Robert Preissner, Cornelius Frömmel, 2008, Biophysical journal.