Insuk Lee

发表

VirtualCytometry: a webserver for evaluating immune cell differentiation using single-cell RNA sequencing data

Kyungsoo Kim, Sunmo Yang, Sang-Jun Ha, 2019, Bioinform..

Effects of functional bias on supervised learning of a gene network model.

Insuk Lee, Edward M Marcotte, E. Marcotte, 2009, Methods in molecular biology.

Modes of Interaction between Individuals Dominate the Topologies of Real World Networks

Insuk Lee, Eiru Kim, Edward M. Marcotte, 2014, bioRxiv.

YeastNet v3: a public database of data-specific and integrated functional gene networks for Saccharomyces cerevisiae

Hyojin Kim, Jung Eun Shim, Insuk Lee, 2013, Nucleic Acids Res..

JiffyNet: a web-based instant protein network modeler for newly sequenced species

Insuk Lee, Eiru Kim, Hanhae Kim, 2013, Nucleic Acids Res..

Construction of Functional Protein Networks Using Domain Profile Associations

Insuk Lee, Jung Eun Shim, Insuk Lee, 2020, Protein-Protein Interaction Networks.

EcoliNet: a database of cofunctional gene network for Escherichia coli

Jung Eun Shim, Insuk Lee, Junha Shin, 2015, Database J. Biol. Databases Curation.

MORPHIN: a web tool for human disease research by projecting model organism biology onto a human integrated gene network

Sunmo Yang, Insuk Lee, Eiru Kim, 2014, Nucleic Acids Res..

Introduction. Progresses in genome informatics.

Osamu Gotoh, Insuk Lee, In-Sun Chu, 2011, Journal of bioinformatics and computational biology.

Network perturbation by recurrent regulatory variants in cancer

Insuk Lee, Kiwon Jang, A-Ra Cho, 2017, PLoS Comput. Biol..

MouseNet v2: a database of gene networks for studying the laboratory mouse and eight other model vertebrates

Hyojin Kim, Sunmo Yang, Insuk Lee, 2015, Nucleic Acids Res..

SoyNet: a database of co-functional networks for soybean Glycine max

Insuk Lee, Eiru Kim, Sohyun Hwang, 2016, Nucleic Acids Res..

COEXPEDIA: exploring biomedical hypotheses via co-expressions associated with medical subject headings (MeSH)

Hyojin Kim, Sunmo Yang, Insuk Lee, 2016, Nucleic Acids Res..

HumanNet v2: human gene networks for disease research

Sunmo Yang, Insuk Lee, Chan Yeong Kim, 2018, Nucleic Acids Res..

GWAB: a web server for the network-based boosting of human genome-wide association data

Jung Eun Shim, Sunmo Yang, Insuk Lee, 2017, Nucleic Acids Res..

BiomeNet: a database for construction and analysis of functional interaction networks for any species with a sequenced genome

Sunmo Yang, Insuk Lee, Eiru Kim, 2019, Bioinform..

Integrating functional genomics data.

Insuk Lee, Edward M Marcotte, E. Marcotte, 2008, Methods in molecular biology.

A high-accuracy consensus map of yeast protein complexes reveals modular nature of gene essentiality

Insuk Lee, Edward M. Marcotte, G. Traver Hart, 2007, BMC Bioinformatics.

TRRUST v2: an expanded reference database of human and mouse transcriptional regulatory interactions

Hyojin Kim, Sungho Lee, Sunmo Yang, 2017, Nucleic Acids Res..

WormNet v3: a network-assisted hypothesis-generating server for Caenorhabditis elegans

Hyojin Kim, Insuk Lee, A-Ra Cho, 2014, Nucleic Acids Res..

Weighted mutual information analysis substantially improves domain-based functional network models

Jung Eun Shim, Insuk Lee, Insuk Lee, 2016, Bioinform..

RiceNet v2: an improved network prioritization server for rice genes

Hyojin Kim, Jung Eun Shim, Sunmo Yang, 2015, Nucleic Acids Res..

Complementarity between distance- and probability-based methods of gene neighbourhood identification for pathway reconstruction.

Insuk Lee, Junha Shin, Tak Lee, 2014, Molecular bioSystems.

FlyNet: a versatile network prioritization server for the Drosophila community

Hyojin Kim, Jung Eun Shim, Sunmo Yang, 2015, Nucleic Acids Res..

AraNet v2: an improved database of co-functional gene networks for the study of Arabidopsis thaliana and 27 other nonmodel plant species

Hyojin Kim, Jung Eun Shim, Sunmo Yang, 2014, Nucleic Acids Res..

Single-cell ATAC sequencing analysis: From data preprocessing to hypothesis generation

Insuk Lee, Seungbyn Baek, Insuk Lee, 2020, Computational and structural biotechnology journal.

Towards understanding how molecular networks evolve in plants.

Insuk Lee, Seung Yon Rhee, Junha Shin, 2012, Current opinion in plant biology.

RIDDLE: reflective diffusion and local extension reveal functional associations for unannotated gene sets via proximity in a gene network

Insuk Lee, Edward M Marcotte, Sohyun Hwang, 2012, Genome Biology.

Characterising and Predicting Haploinsufficiency in the Human Genome

Insuk Lee, Edward M. Marcotte, Matthew E. Hurles, 2010, PLoS genetics.

Network-guided genetic screening: building, testing and using gene networks to predict gene function.

Insuk Lee, Ben Lehner, Insuk Lee, 2008, Briefings in functional genomics & proteomics.

From sequencing data to gene functions: co-functional network approaches

Jung Eun Shim, Insuk Lee, Insuk Lee, 2017, Animal cells and systems.

araGWAB: Network-based boosting of genome-wide association studies in Arabidopsis thaliana

Insuk Lee, Insuk Lee, Tak Lee, 2018, Scientific Reports.

An integrated systems biology approach identifies positive cofactor 4 as a factor that increases reprogramming efficiency

Insuk Lee, Hyung Joon Kim, Sohyun Hwang, 2016, Nucleic acids research.

Rational Extension of the Ribosome Biogenesis Pathway Using Network-Guided Genetics

Insuk Lee, Edward M. Marcotte, Zhihua Li, 2009, PLoS biology.

Metabolomics as a Hypothesis-Generating Functional Genomics Tool for the Annotation of Arabidopsis thaliana Genes of “Unknown Function”

Insuk Lee, Julie A. Dickerson, Oliver Fiehn, 2012, Front. Plant Sci..

TRRUST: a reference database of human transcriptional regulatory interactions

Jung Eun Shim, Sunmo Yang, Insuk Lee, 2015, Scientific Reports.

Systematic comparison of variant calling pipelines using gold standard personal exome variants

Insuk Lee, Eiru Kim, Edward M. Marcotte, 2015, Scientific Reports.